Jens Petersen

Jens Petersen

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ORCID: 0000-0003-0138-0693

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  1. Udgivet

    A Cross-Center Smoothness Prior for Variational Bayesian Brain Tissue Segmentation

    Kouw, W. M., Ørting, S. N., Petersen, Jens, Steenstrup Pedersen, Kim & de Bruijne, Marleen, 1 jan. 2019, Information Processing in Medical Imaging : 26th International Conference, IPMI 2019, Proceedings. Bao, S., Chung, A. C. S., Gee, J. C. & Yushkevich, P. A. (red.). Springer, s. 360-371 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), Bind 11492 LNCS).

    Publikation: Bidrag til bog/antologi/rapport › Konferencebidrag i proceedings › Forskning › fagfællebedømt

  2. Udgivet

    A hierarchical scheme for geodesic anatomical labeling of airway trees

    Feragen, A., Petersen, Jens, Owen, M., Lo, P. C. P., Thomsen, L., Wille, M. M. W., Dirksen, A. & de Bruijne, Marleen, 2012, Medical Image Computing and Computer-Assisted Intervention – MICCAI 2012: 15th International Conference, Nice, France, October 1-5, 2012, Proceedings, Part III. Ayache, N., Delingette, H., Golland, P. & Mori, K. (red.). Springer, s. 147-155 9 s. (Lecture notes in computer science, Bind 7512).

    Publikation: Bidrag til bog/antologi/rapport › Konferencebidrag i proceedings › Forskning › fagfællebedømt

  3. Udgivet

    Airway distensibility in chronic obstructive pulmonary disease – evaluation by CT airway segmentation and lung density measurement based on the Danish lung cancer screening trial

    M. W. Wille, M., Petersen, Jens, Dirksen, A., Pedersen, J. J. H. & de Bruijne, Marleen, 2013, I: American Journal of Respiratory and Critical Care Medicine. 187, s. A2871 1 s.

    Publikation: Bidrag til tidsskrift › Konferenceabstrakt i tidsskrift › Forskning › fagfællebedømt

  4. Udgivet

    An automatic system for segmentation, matching, anatomical labeling and measurement of airways from CT images

    Petersen, Jens, Feragen, A., Owen, M., Lo, P., Wille, M. M. W., Thomsen, L. H., Dirksen, A. & de Bruijne, Marleen, 2013. 1 s.

    Publikation: Konferencebidrag › Poster › Forskning › fagfællebedømt

  5. Udgivet

    Analysis of airways in computed tomography

    Petersen, Jens, 2014, Department of Computer Science, Faculty of Science, University of Copenhagen. 135 s.

    Publikation: Bog/antologi/afhandling/rapport › Ph.d.-afhandling › Forskning

  6. Udgivet

    Automated quantification of bronchiectasis, airway wall thickening and lumen tapering in chest CT

    Perez-Rovira, A., Kuo, W., Petersen, Jens, A.W.M. Tiddens, H. & de Bruijne, Marleen, 2015. 1 s.

    Publikation: Konferencebidrag › Konferenceabstrakt til konference › Forskning › fagfællebedømt

  7. Udgivet

    Automatic airway-artery analysis on lung CT to quantify airway wall thickening and bronchiectasis

    Perez-Rovira, A., Kuo, W., Petersen, Jens, Tiddens, H. A. W. M. & de Bruijne, Marleen, 2016, I: Medical Physics. 43, 10, s. 5736-5744 9 s.

    Publikation: Bidrag til tidsskrift › Tidsskriftartikel › Forskning › fagfællebedømt

  8. Udgivet

    Carotid artery lumen segmentation in 3D free-hand ultrasound images using surface graph cuts

    Lorza, A. M. A., Carvalho, D. D. B., Petersen, Jens, Dijk, A. C. V., Lugt, A. V. D., Niessen, W. J., Klein, S. & de Bruijne, Marleen, 2013, Medical Image Computing and Computer-Assisted Intervention – MICCAI 2013: 16th International Conference, Nagoya, Japan, September 22-26, 2013, Proceedings, Part II. Mori, K., Sakuma, I., Sato, Y., Barillot, C. & Navab, N. (red.). Springer, s. 542-549 8 s. (Lecture notes in computer science, Bind 8150).

    Publikation: Bidrag til bog/antologi/rapport › Konferencebidrag i proceedings › Forskning › fagfællebedømt

  9. Udgivet

    Carotid artery wall segmentation by coupled surface graph cuts

    Arias, A., Petersen, Jens, van Engelen, A., Tang, H., Selwaness, M., Witteman, J. C. M., van der Lugt, A., Niessen, W. & de Bruijne, Marleen, 2013, Medical Computer Vision. Recognition techniques and applications in medical imaging: Second International MICCAI Workshop, MCV 2012, Nice, France, Revised Selected Papers. Menze, B. H., Langs, G., Lu, L., Montillo, A., Tu, Z. & Criminisi, A. (red.). Springer, s. 38-47 10 s. (Lecture notes in computer science, Bind 7766).

    Publikation: Bidrag til bog/antologi/rapport › Konferencebidrag i proceedings › Forskning › fagfællebedømt

  10. Udgivet

    Carotid artery wall segmentation in multispectral MRI by coupled optimal surface graph cuts

    Arias-Lorza, A. M., Petersen, Jens, van Engelen, A., Selwaness, M., van der Lugt, A., J. Niessen, W. & de Bruijne, Marleen, 2016, I: IEEE Transactions on Medical Imaging. 35, 3, s. 901-911 11 s.

    Publikation: Bidrag til tidsskrift › Tidsskriftartikel › Forskning › fagfællebedømt

  11. Udgivet

    Chronic Obstructive Pulmonary Disease Quantification Using CT Texture Analysis and Densitometry: Results From the Danish Lung Cancer Screening Trial

    Sørensen, L., Nielsen, Mads, Petersen, Jens, Pedersen, J. H., Dirksen, A. & de Bruijne, Marleen, 2020, I: American Journal of Roentgenology. 214, 6, s. 1269-1279

    Publikation: Bidrag til tidsskrift › Tidsskriftartikel › Forskning › fagfællebedømt

  12. Udgivet

    Crowdsourced emphysema assessment

    Ørting, S. N., Cheplygina, V., Petersen, Jens, Thomsen, L. H., Wille, M. M. W. & de Bruijne, Marleen, 2017, Intravascular Imaging and Computer Assisted Stenting, and Large-Scale Annotation of Biomedical Data and Expert Label Synthesis: 6th Joint International Workshops, CVII-STENT 2017 and Second International Workshop, LABELS 2017, Held in Conjunction with MICCAI 2017, Québec City, QC, Canada, September 10–14, 2017, Proceedings. Cardoso, M. J., Arbel, T., Lee, S-L., Cheplygina, V., Balocco, S., Mateus, D., Zahnd, G., Maier-Hein, L., Dermirci, S., Granger, E., Duong, L., Carbonneau, M-A., Albarquoni, S. & Carneiro, G. (red.). Springer, s. 126-135 10 s. (Lecture notes in computer science, Bind 10552).

    Publikation: Bidrag til bog/antologi/rapport › Konferencebidrag i proceedings › Forskning › fagfællebedømt

  13. Udgivet

    Detecting emphysema with multiple instance learning

    Orting, S. N., Petersen, Jens, Thomsen, L. H., Wille, M. M. W. & de Bruijne, Marleen, 23 maj 2018, 2018 IEEE 15th International Symposium on Biomedical Imaging, ISBI 2018. IEEE, s. 510-513

    Publikation: Bidrag til bog/antologi/rapport › Konferencebidrag i proceedings › Forskning › fagfællebedømt

  14. Udgivet

    Developing and validating COVID-19 adverse outcome risk prediction models from a bi-national European cohort of 5594 patients

    Jimenez-Solem, E., Petersen, T. S., Hansen, C., Hansen, C., Lioma, C., Igel, C., Boomsma, W., Krause, O., Lorenzen, S., Selvan, R., Petersen, J., Nyeland, M. E., Ankarfeldt, M. Z., Virenfeldt, G. M., Winther-Jensen, M., Linneberg, A., Ghazi, M. M., Detlefsen, N., Lauritzen, A. D., Smith, A. G. & 15 flere, de Bruijne, Marleen, Ibragimov, Bulat, Petersen, Jens, Lillholm, Martin, Middleton, Jon Anthony, Mogensen, S. H., Thorsen-Meyer, H., Perner, Anders, Helleberg, M., Kaas-Hansen, Benjamin Skov, Bonde, M., Bonde, A., Pai, A., Nielsen, Mads & Sillesen, Martin Hylleholt, 2021, I: Scientific Reports. 11, 1, 12 s., 3246.

    Publikation: Bidrag til tidsskrift › Tidsskriftartikel › Forskning › fagfællebedømt

  15. Udgivet

    Diagnosis of bronchiectasis and airway wall thickening in children with cystic fibrosis: objective airway-artery quantification

    Kuo, W., de Bruijne, Marleen, Petersen, Jens, Nasserinejad, K., Ozturk, H., Chen, Y., Perez-Rovira, A. & Tiddens, H. A. W. M., nov. 2017, I: European Radiology. 27, 11, s. 4680-4689 10 s.

    Publikation: Bidrag til tidsskrift › Tidsskriftartikel › Forskning › fagfællebedømt

  16. Udgivet

    Dissimilarity-based classification of anatomical tree structures

    Sørensen, L., Lo, P. C. P., Dirksen, A., Petersen, Jens & de Bruijne, Marleen, 2011, Information Processing in Medical Imaging: 22nd International Conference, IPMI 2011, Kloster Irsee, Germany, July 3-8, 2011. Proceedings. Székely, G. & Hahn, H. K. (red.). Springer, s. 475-485 11 s. (Lecture notes in computer science, Bind 6801).

    Publikation: Bidrag til bog/antologi/rapport › Konferencebidrag i proceedings › Forskning › fagfællebedømt

  17. Udgivet

    Effect of inspiration on airway dimensions measured in maximal inspiration CT images of subjects without airflow limitation

    Petersen, Jens, Wille, M. M. W., Raket, L. L., Feragen, A., Pedersen, J. H., Nielsen, Mads, Dirksen, A. & de Bruijne, Marleen, 2014, I: European Radiology. 24, 9, s. 2319-2325 7 s.

    Publikation: Bidrag til tidsskrift › Tidsskriftartikel › Forskning › fagfællebedømt

  18. Udgivet

    Emphysema progression is visually detectable in low-dose CT in continuous but not in former smokers

    Wille, M. M. W., Thomsen, L. H., Dirksen, A., Petersen, Jens, Pedersen, J. J. H. & Shaker, S. B., 2014, I: European Radiology. 24, 11, s. 2692-2699 8 s.

    Publikation: Bidrag til tidsskrift › Tidsskriftartikel › Forskning › fagfællebedømt

  19. Udgivet

    Explicit Temporal Embedding in Deep Generative Latent Models for Longitudinal Medical Image Synthesis

    Schön, Julian Elisha, Selvan, Raghav, Nygård, L., Vogelius, Ivan R. & Petersen, Jens, 13 jan. 2023, arxiv.org.

    Publikation: Working paper › Preprint › Forskning

  20. Udgivet

    Extracting tree structures in CT data by tracking multiple statistically ranked hypotheses

    Selvan, Raghav, Petersen, Jens, Pedersen, J. H. & de Bruijne, Marleen, 18 okt. 2019, I: Medical Physics. 46, 10, s. 4431-4440

    Publikation: Bidrag til tidsskrift › Tidsskriftartikel › Forskning › fagfællebedømt

  21. Udgivet

    Extraction of Airways using Graph Neural Networks

    Selvan, Raghav, Kipf, T., Welling, M., Pedersen, J. J. H., Petersen, Jens & de Bruijne, Marleen, 2018. 3 s.

    Publikation: Konferencebidrag › Konferenceabstrakt til konference › Forskning › fagfællebedømt

  22. Udgivet

    Extraction of Airways with Probabilistic State-Space Models and Bayesian Smoothing

    Selvan, Raghav, Petersen, Jens, Pedersen, J. J. H. & de Bruijne, Marleen, 2017, Graphs in Biomedical Image Analysis, Computational Anatomy and Imaging Genetics: First International Workshop, GRAIL 2017, 6th International Workshop, MFCA 2017, and Third International Workshop, MICGen 2017, Held in Conjunction with MICCAI 2017, Québec City, QC, Canada, September 10–14, 2017, Proceedings. Cardoso, M. J., Arbel, T., Ferrante, E., Pennec, X., Dalca, A. V., Parisot, S., Joshi, S., Batmanghelich, N. K., Sotiras, A., Nielsen, M., Sabuncu, M. R., Fletcher, T., Shen, L., Durrleman, S. & Sommer, S. (red.). Springer, s. 53-63 (Lecture notes in computer science, Bind 10551).

    Publikation: Bidrag til bog/antologi/rapport › Konferencebidrag i proceedings › Forskning › fagfællebedømt

  23. Udgivet

    Extraction of airway trees using multiple hypothesis tracking and template matching

    Selvan, Raghav, Petersen, Jens, Pedersen, J. J. H. & de Bruijne, Marleen, 2016, The Sixth International Workshop on Pulmonary Image Analysis: Athens, Greece - October 21, 2016. Beichel, R. R., Farahani, K., Jacobs, C., Kabus, S., Kiraly, A. P., Kuhnigk, J-M., McClelland, J. R., Mori, K., Petersen, J. & Rit, S. (red.). Create Space Independent Publishing Platform, s. 43-54 12 s.

    Publikation: Bidrag til bog/antologi/rapport › Konferencebidrag i proceedings › Forskning › fagfællebedømt

  24. Udgivet

    Feature Learning Based on Visual Similarity Triplets in Medical Image Analysis: A Case Study of Emphysema in Chest CT Scans

    Nyboe Ørting, S., Petersen, Jens, Cheplygina, V., Thomsen, L. H., Wille, M. M. W. & de Bruijne, Marleen, 2018, Intravascular Imaging and Computer Assisted Stenting and Large-Scale Annotation of Biomedical Data and Expert Label Synthesis: 7th Joint International Workshop, CVII-STENT 2018 and Third International Workshop, LABELS 2018 Held in Conjunction with MICCAI 2018 Granada, Spain, September 16, 2018 Proceedings. Stoyanov, D., Taylor, Z., Balocco, S. & Sznitman, R. (red.). Springer, s. 140-149 Chapter 16. (Lecture Notes in Computer Science, Bind 11043).

    Publikation: Bidrag til bog/antologi/rapport › Konferencebidrag i proceedings › Forskning › fagfællebedømt

  25. Udgivet

    Geodesic atlas-based labeling of anatomical trees: application and evaluation on airways extracted from CT

    Feragen, A., Petersen, Jens, Owen, M., Lo, P., Thomsen, L. H., Wille, M. M. W., Dirksen, A. & de Bruijne, Marleen, 2015, I: IEEE Transactions on Medical Imaging. 34, 6, s. 1212-1226 15 s.

    Publikation: Bidrag til tidsskrift › Tidsskriftartikel › Forskning › fagfællebedømt

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