Mads Nielsen

Mads Nielsen

Professor


  1. 2013
  2. Udgivet

    Sparse multi-scale diffeomorphic registration: the kernel bundle framework

    Sommer, Stefan Horst, Lauze, Francois Bernard, Nielsen, Mads & Pennec, X., 2013, I : Journal of Mathematical Imaging and Vision. 46, 3, s. 292-308 17 s.

    Publikation: Bidrag til tidsskriftTidsskriftartikelForskningfagfællebedømt

  3. Udgivet

    Toward a theory of statistical tree-shape analysis

    Feragen, Aasa, Lo, P. C. P., de Bruijne, Marleen, Nielsen, Mads & Lauze, Francois Bernard, 2013, I : I E E E Transactions on Pattern Analysis and Machine Intelligence. 35, 8, s. 2008-2021 14 s.

    Publikation: Bidrag til tidsskriftTidsskriftartikelForskningfagfællebedømt

  4. 2014
  5. Udgivet

    A method to determine the mammographic regions that show early changes due to the development of breast cancer

    Karemore, Gopal, Nielsen, Mads, Karssemeijer, N. & Brandt, Sami Sebastian, 2014, I : Physics in Medicine and Biology. 59, 22, s. 6759-6773 15 s.

    Publikation: Bidrag til tidsskriftTidsskriftartikelForskningfagfællebedømt

  6. Udgivet

    Alzheimer's disease diagnostic performance of a multi-atlas hippocampal segmentation method using the harmonized hippocampal protocol

    Anker, C., xfj310, xfj310, Pai, Akshay Sadananda Uppinakudru, Lyksborg, M., Lillholm, Martin, Conradsen, K., Larsen, R. & Nielsen, Mads, 2014. 1 s.

    Publikation: KonferencebidragKonferenceabstrakt til konferenceForskningfagfællebedømt

  7. Udgivet

    Automated hippocampal segmentation using new standardized manual segmentations from the harmonized hippocampal protocol

    Anker, C., Pai, Akshay Sadananda Uppinakudru, xfj310, xfj310, Lyksborg, M., Conradsen, K., Larsen, R. & Nielsen, Mads, 2014, I : Alzheimer's & Dementia. 10, 4, Supplement, s. P33 1 s., IC-P-058.

    Publikation: Bidrag til tidsskriftKonferenceabstrakt i tidsskriftForskningfagfællebedømt

  8. Udgivet

    Automated hippocampal segmentation using new standardized manual segmentations from the harmonized hippocampal protocol

    Anker, C., Pai, Akshay Sadananda Uppinakudru, xfj310, xfj310, Lyksborg, M., Conradsen, K., Larsen, R. & Nielsen, Mads, 2014, I : Alzheimer's & Dementia. 10, 4, Supplement, s. P415-P416 2 s., P1-288.

    Publikation: Bidrag til tidsskriftKonferenceabstrakt i tidsskriftForskningfagfællebedømt

  9. Udgivet

    Brain region's relative proximity as marker for Alzheimer's disease based on structural MRI

    Erleben, L. L., xfj310, xfj310, Pai, Akshay Sadananda Uppinakudru, Dam, Erik Bjørnager, Nielsen, Mads & Initiative, A. D. N., 2014, I : BMC Medical Imaging. 14, 1, 12 s., 21.

    Publikation: Bidrag til tidsskriftTidsskriftartikelForskningfagfællebedømt

  10. Udgivet

    Breast tissue segmentation and mammographic risk scoring using deep learning

    Petersen, P. K., Nielsen, Mads, Diao, Pengfei, Karssemeijer, N. & Lillholm, Martin, 2014, Breast imaging: 12th International Workshop, IWDM 2014, Gifu City, Japan, June 29 – July 2, 2014. Proceedings. Fujita, H., Hara, T. & Muramatsu, C. (red.). Springer Science+Business Media, s. 88-94 7 s. (Lecture notes in computer science, Bind 8539).

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  11. Udgivet

    Breast tissue segmentation from x-ray radiographs

    Chen, C., Nielsen, Mads, Karssemeijer, N. & Brandt, Sami Sebastian, 2014, I : Physics in Medicine and Biology. 59, 10, s. 2445-2456 12 s.

    Publikation: Bidrag til tidsskriftTidsskriftartikelForskningfagfællebedømt

  12. Udgivet
  13. Udgivet

    Dementia diagnosis using MRI cortical thickness, shape, texture, and volumetry

    xfj310, xfj310, Pai, Akshay Sadananda Uppinakudru, Anker, C., Balas, I., Lillholm, Martin, Igel, Christian & Nielsen, Mads, 2014, MICCAI 2014 Workshop Proceedings: Challenge on Computer-Aided Diagnosis of Dementia Based on Structural MRI Data. Bron, E. E., Smits, M., van Swieten, J. C., Niessen, W. J. & Klein, S. (red.). Erasmus Universiteit Rotterdam, s. 111-118 8 s.

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  14. Udgivet

    Effect of inspiration on airway dimensions measured in maximal inspiration CT images of subjects without airflow limitation

    Petersen, Jens, Wille, M. M. W., Raket, L. L., Feragen, Aasa, Pedersen, J. H., Nielsen, Mads, Dirksen, A. & de Bruijne, Marleen, 2014, I : European Radiology. 24, 9, s. 2319-2325 7 s.

    Publikation: Bidrag til tidsskriftTidsskriftartikelForskningfagfællebedømt

  15. Udgivet

    Geometry and statistics: manifolds and stratified spaces

    Feragen, Aasa, Nielsen, Mads, Jensen, E. B. V., Plessis, A. D. & Lauze, Francois Bernard, 2014, I : Journal of Mathematical Imaging and Vision. 50, 1, s. 1-4 4 s.

    Publikation: Bidrag til tidsskriftLederForskning

  16. Udgivet

    Graph-based fibre tractography computing shortest paths between regions of interest

    Kasenburg, N., Liptrot, M. G., Borgwardt, K., Ørting, Silas Nyboe, Nielsen, Mads & Feragen, Aasa, 2014. 1 s.

    Publikation: KonferencebidragKonferenceabstrakt til konferenceForskningfagfællebedømt

  17. Udgivet

    Mammographic texture resemblance generalizes as an independent risk factor for breast cancer

    Nielsen, Mads, Vachon, C. M., Scott, C. G., Chernoff, K., Karemore, Gopal, Karssemeijer, N., Lillholm, Martin & Karsdal, M., 2014, I : Breast Cancer Research (Online Edition). 16, 2, 8 s., R37.

    Publikation: Bidrag til tidsskriftTidsskriftartikelForskningfagfællebedømt

  18. Udgivet

    Optimal surface segmentation using flow lines to quantify airway abnormalities in chronic obstructive pulmonary disease

    Petersen, Jens, Nielsen, Mads, Lo, P. C. P., Nordenmark, L. H., Pedersen, J. J. H., Wille, M. M. W., Dirksen, A. & de Bruijne, Marleen, 2014, I : Medical Image Analysis. 18, 3, s. 531-541 11 s.

    Publikation: Bidrag til tidsskriftTidsskriftartikelForskningfagfællebedømt

  19. Udgivet

    Optimization over geodesics for exact principal geodesic analysis

    Sommer, Stefan Horst, Lauze, Francois Bernard & Nielsen, Mads, 2014, I : Advances in Computational Mathematics. 40, 2, s. 283-313 31 s.

    Publikation: Bidrag til tidsskriftTidsskriftartikelForskningfagfællebedømt

  20. Udgivet

    Persistent hippocampal predominant atrophy in pre dementia as a marker for slower functional decline

    Pillai, J., Pai, Akshay Sadananda Uppinakudru, xfj310, xfj310 & Nielsen, Mads, 2014, I : Alzheimer's & Dementia. 10, 4, Supplement, s. P538-P539 2 s., P2-186.

    Publikation: Bidrag til tidsskriftKonferenceabstrakt i tidsskriftForskningfagfællebedømt

  21. Udgivet

    Persistent hippocampal predominant atrophy in pre dementia as a marker for slower functional decline

    Pillai, J., Pai, Akshay Sadananda Uppinakudru, xfj310, xfj310 & Nielsen, Mads, 2014, I : Alzheimer's & Dementia. 10, 4, Supplement, s. P34-P35 2 s., IC-P-061.

    Publikation: Bidrag til tidsskriftKonferenceabstrakt i tidsskriftForskningfagfællebedømt

  22. Udgivet

    Simultaneous registration and bilateral differential bias correction in brain MRI

    Zou, B., Pai, Akshay Sadananda Uppinakudru, xfj310, xfj310 & Nielsen, Mads, 2014, Intelligent Imaging: Linking MR Acquisition and Processing.

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  23. Udgivet

    Stepwise inverse consistent Euler’s scheme for diffeomorphic image registration

    Pai, Akshay Sadananda Uppinakudru, Sommer, Stefan Horst, Darkner, Sune, xfj310, xfj310, Sporring, Jon & Nielsen, Mads, 2014, Biomedical Image Registration: 6th International Workshop, WBIR 2014, London, UK, July 7-8, 2014. Proceedings. Ourselin, S. & Modat, M. (red.). Springer, s. 223-230 8 s. (Lecture notes in computer science, Bind 8545).

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  24. Udgivet

    Validation of hippocampal texture for early Alzheimer’s disease detection: generalization to independent cohorts and extrapolation to very early signs of dementia

    xfj310, xfj310, Igel, Christian, Hansen, N. L., Lauritzen, Martin, Osler, Merete, Rostrup, E. & Nielsen, Mads, 2014, I : Alzheimer's & Dementia. 10, 4, Supplement, s. P133 1 s.

    Publikation: Bidrag til tidsskriftKonferenceabstrakt i tidsskriftForskningfagfællebedømt

  25. Udgivet

    White matter hypointensity growth rate correlates with rate of brain atrophy

    Pai, Akshay Sadananda Uppinakudru, xfj310, xfj310, Darkner, Sune, Sporring, Jon, Rostrup, E. & Nielsen, Mads, 2014, I : Alzheimer's & Dementia. 10, 4, Supplement, s. P75-P76 2 s., IC-P-131.

    Publikation: Bidrag til tidsskriftKonferenceabstrakt i tidsskriftForskningfagfællebedømt

  26. Udgivet

    White matter hypointensity growth rate correlates with rate of brain atrophy

    Pai, Akshay Sadananda Uppinakudru, xfj310, xfj310, Darkner, Sune, Sporring, Jon, Rostrup, E. & Nielsen, Mads, 2014, I : Alzheimer's & Dementia. 10, 4, Supplement, s. P414 1 s., P1-285.

    Publikation: Bidrag til tidsskriftKonferenceabstrakt i tidsskriftForskningfagfællebedømt

  27. Udgivet
  28. 2015
  29. Udgivet

    Adaptive time-stepping in dieomorphic image registration with bounded inverse consistency error

    Pai, Akshay Sadananda Uppinakudru, Klein, S., Sommer, Stefan Horst, xfj310, xfj310, Darkner, Sune, Sporring, Jon & Nielsen, Mads, 2015, Proceedings of the fifth international workshop on Mathematical Foundations of Computational Anatomy (MFCA 2015) . INRIA, s. 35-47

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  30. Udgivet

    Adaptive time-stepping in diffeomorphic image registration with bounded inverse consistency error

    Pai, Akshay Sadananda Uppinakudru, Klein, S., Sommer, Stefan Horst, xfj310, xfj310, Darkner, Sune, Sporring, Jon & Nielsen, Mads, 2015, The 18th International Conference on Medical Image Computing and Computer Assisted Intervention: proceedings. Technische Universität München , s. 35-47 13 s.

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  31. Udgivet

    Assessing breast cancer masking risk in full field digital mammography with automated texture analysis

    Kallenberg, M. G. J., Lillholm, Martin, Diao, Pengfei, Holland, K., Karssemeijer, N., Igel, Christian & Nielsen, Mads, 2015, 7th International Workshop on Breast Densitometry and Cancer Risk Assessment (Non-CME). University of California, s. 109 1 s.

    Publikation: Bidrag til bog/antologi/rapportKonferenceabstrakt i proceedingsForskningfagfællebedømt

  32. Udgivet

    Assessing breast cancer masking risk with automated texture analysis in full field digital mammography

    Kallenberg, M. G. J., Lillholm, Martin, Diao, Pengfei, Petersen, K., Holland, K., Karssemeijer, N., Igel, Christian & Nielsen, Mads, 2015, Breast Imaging and Interventional. Radiological Society of North America, Inc, s. 218 1 s.

    Publikation: Bidrag til bog/antologi/rapportKonferenceabstrakt i proceedingsForskningfagfællebedømt

  33. Udgivet

    Automated texture scoring for assessing breast cancer masking risk in full field digital mammography

    Kallenberg, M. G. J., Petersen, P. K., Lillholm, Martin, Jørgensen, D. R., Diao, Pengfei, Holland, K., Karssemeijer, N., Igel, Christian & Nielsen, Mads, 2015, I : Insights into Imaging. 6, 1, Supplement, 1 s., B-0212.

    Publikation: Bidrag til tidsskriftKonferenceabstrakt i tidsskriftForskningfagfællebedømt

  34. Udgivet

    Automatic segmentation of high-and low-field knee MRIs using knee image quantification with data from the osteoarthritis initiative

    Dam, Erik Bjørnager, Lillholm, Martin, Marques, J. & Nielsen, Mads, 2015, I : SPIE Journal of Medical Imaging. 2, 2, 13 s., 024001.

    Publikation: Bidrag til tidsskriftTidsskriftartikelForskningfagfællebedømt

  35. Udgivet
  36. Udgivet

    Diffeomorphic image registration with automatic time-step adjustment

    Pai, Akshay Sadananda Uppinakudru, Klein, S., Sommer, Stefan Horst, Darkner, Sune, Sporring, Jon & Nielsen, Mads, 2015, Biomedical Imaging (ISBI), 2015 IEEE 12th International Symposium on. IEEE, s. 1085-1088 4 s.

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  37. Udgivet

    Hippocampal MRI texture is related to hippocampal glucose metabolism

    xfj310, xfj310, Pai, Akshay Sadananda Uppinakudru, Igel, Christian & Nielsen, Mads, 2015, I : Alzheimer's & Dementia. 11, 7, Supplement, s. P55-P56 2 s., IC-P-077.

    Publikation: Bidrag til tidsskriftKonferenceabstrakt i tidsskriftForskningfagfællebedømt

  38. Udgivet

    Hippocampal texture predicts ad conversion in amyloid positive mild cognitively impaired subjects

    Nielsen, Mads, Igel, Christian & xfj310, xfj310, 2015, I : Neurodegenerative Diseases. 15, Suppl. 1, s. 262 1 s., ADPD5-0947.

    Publikation: Bidrag til tidsskriftKonferenceabstrakt i tidsskriftForskning

  39. Udgivet
  40. Udgivet
  41. Udgivet

    Improved Alzheimer's disease diagnostic performance using structural MRI: validation of the MRI combination biomarker that won the CADDementia challenge

    xfj310, xfj310, Lillholm, Martin, Pai, Akshay Sadananda Uppinakudru, Balas, I., Anker, C., Igel, Christian & Nielsen, Mads, 2015, I : Insights into Imaging. 6, Supplement 1, 1 s., B-0077.

    Publikation: Bidrag til tidsskriftKonferenceabstrakt i tidsskriftForskning

  42. Udgivet

    Inter-observer agreement according to three methods of evaluating mammographic density and parenchymal pattern in a case control study: impact on relative risk of breast cancer

    Winkel, R. R., von Euler-Chelpin, My Catarina, Nielsen, Mads, Diao, Pengfei, Nielsen, Michael Bachmann, Uldall, W. Y. & Vejborg, I. M. M., 2015, I : BMC Cancer. 15, 14 s., 274.

    Publikation: Bidrag til tidsskriftTidsskriftartikelForskningfagfællebedømt

  43. Udgivet

    Locally orderless registration for diffusion weighted images

    Jensen, H. G., Lauze, Francois Bernard, Nielsen, Mads & Darkner, Sune, 2015, Medical Image Computing and Computer-Assisted Intervention -- MICCAI 2015: 18th international conference, Munich, Germany, October 5-9, 2015, Proceedings, Part II. Navab, N., Hornegger, J., Wells, W. M. & Frangi, A. F. (red.). Springer, s. 305-312 8 s. (Lecture notes in computer science, Bind 9350).

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  44. Udgivet

    Multimodal brain extraction from structural MRI using co-registered FDG-PET

    Jensen, H. G., Federspiel, F. V. K., Ptito, M., Nielsen, Mads, Gjedde, Albert, Keller, S. H., Law, Ian, Kupers, Ron & Darkner, Sune, 2015. 12 s.

    Publikation: KonferencebidragPaperForskning

  45. Udgivet

    Proceedings of the fifth international workshop on Mathematical Foundations of Computational Anatomy (MFCA 2015)

    Pennec, X. (red.), Joshi, S. (red.), Nielsen, Mads (red.), Fletcher, T. P. (red.), Durrleman, S. (red.) & Sommer, Stefan Horst (red.), 2015, INRIA. 173 s.

    Publikation: Bog/antologi/afhandling/rapportAntologiForskning

  46. Udgivet

    Relevance sampling

    Nielsen, Mads, Markussen, Bo & Loog, M., 2015, Proceedings of the Eight Workshop on Information Theoretic Methods in Science and Engineering. Rissanen, J., Harremoës, P., Forchhammer, S., Roos, T. & Myllymäki, P. (red.). Department of Computer Science, University of Helsinki , s. 35-38 4 s. (Series of Publications B, Bind B-2015-1).

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  47. Udgivet

    Standardized evaluation of algorithms for computer-aided diagnosis of dementia based on structural MRI: The CADDementia challenge

    Bron, E. E., Smits, M., van der Flier, W. M., Vrenken, H., Barkhof, F., Scheltens, P., Papma, J. M., Steketee, R. M. E., Méndez Orellana, C., Meijboom, R., Pinto, M., Meireles, J. R., Garrett, C., Bastos-Leite, A. J., Abdulkadir, A., Ronneberger, O., Amoroso, N., Bellotti, R., Cárdenas-Peña, D., Álvarez-Meza, A. M., Dolph, C. V., Iftekharuddin, K. M., Eskildsen, S. F., Coupé, P., Fonov, V. S., Franke, K., Gaser, C., Ledig, C., Guerrero, R., Tong, T., Gray, K. R., Moradi, E., Tohka, J., Routier, A., Durrleman, S., Sarica, A., Di Fatta, G., Sensi, F., Chincarini, A., Smith, G. M., Stoyanov, Z. V., xfj310, xfj310, Nielsen, Mads, Tangaro, S., Inglese, P., Wachinger, C., Reuter, M., van Swieten, J. C., Niessen, W. J. & Klein, S., 2015, I : NeuroImage. 111, s. 562-579 18 s.

    Publikation: Bidrag til tidsskriftTidsskriftartikelForskningfagfællebedømt

  48. 2016
  49. Udgivet

    Combining the boundary shift integral and tensor-based morphometry for brain atrophy estimation

    Michalkiewicz, M. D., Pai, Akshay Sadananda Uppinakudru, Leung, K. K., Sommer, Stefan Horst, Darkner, Sune, xfj310, xfj310, Sporring, Jon & Nielsen, Mads, 2016, Medical imaging 2016: Image processing. Styner, M. A. & Angelini, E. D. (red.). SPIE - International Society for Optical Engineering, 6 s. 978406. (Progress in Biomedical Optics and Imaging).

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  50. Udgivet

    Deformation-based atrophy computation by surface propagation and its application to Alzheimer’s disease

    Pai, Akshay Sadananda Uppinakudru, Sporring, Jon, Darkner, Sune, Dam, Erik Bjørnager, Lillholm, Martin, Jørgensen, D., Oh, J., Chen, G., Suhy, J., xfj310, xfj310 & Nielsen, Mads, 2016, I : SPIE Journal of Medical Imaging. 3, 1, 11 s., 014005.

    Publikation: Bidrag til tidsskriftTidsskriftartikelForskningfagfællebedømt

  51. Udgivet

    Do dementia biomarkers have a sigmoid trajectory? Insights from non-linear mixed effects modeling

    Pai, Akshay Sadananda Uppinakudru, Sommer, Stefan Horst, Raket, L. L., xfj310, xfj310 & Nielsen, Mads, 2016, I : Alzheimer's & Dementia. 12, 7, Supplement, s. P356 1 s., O4-09-06.

    Publikation: Bidrag til tidsskriftKonferenceabstrakt i tidsskriftForskningfagfællebedømt

  52. Udgivet

    Early detection of Alzheimer's disease using MRI hippocampal texture

    xfj310, xfj310, Igel, Christian, Hansen, N. L., Osler, Merete, Lauritzen, Martin, Rostrup, E. & Nielsen, Mads, 2016, I : Human Brain Mapping. 37, 3, s. 1148-1161 14 s.

    Publikation: Bidrag til tidsskriftTidsskriftartikelForskningfagfællebedømt

  53. Udgivet

    Kernel bundle diffeomorphic image registration using stationary velocity fields and Wendland basis functions

    Pai, Akshay Sadananda Uppinakudru, Sommer, Stefan Horst, xfj310, xfj310, Darkner, Sune, Sporring, Jon & Nielsen, Mads, 2016, I : IEEE transactions on medical imaging. 35, 6, s. 1369-1380 12 s.

    Publikation: Bidrag til tidsskriftTidsskriftartikelForskningfagfællebedømt

  54. Udgivet

    Learning density independent texture features

    Kallenberg, M. G. J., Nielsen, Mads, Holland, K., Karssemeijer, N., Igel, Christian & Lillholm, Martin, 2016, Breast Imaging: 13th International Workshop, IWDM 2016, Malmö, Sweden, June 19-22, 2016, Proceedings. Tingberg, A., Lång, K. & Timberg, P. (red.). Springer, s. 299-306 8 s. (Lecture notes in computer science, Bind 9699).

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

ID: 542361