Sune Darkner

Sune Darkner

Lektor

  • Image Analysis, Computational Modelling and Geometry

    Universitetsparken 1, 2100 København Ø

    Telefon: +45 35 33 57 02Mobil: +45 21 30 85 84

  1. Udgivet

    3D analysis of synaptic vesicle density and distribution after acute foot-shock stress by using serial section transmission electron microscopy

    Khanmohammadi, M., Darkner, Sune, Nava, N., Nyengaard, J. R., Wegener, G., Popoli, M. & Sporring, Jon, 2017, I : Journal of Microscopy. 265, 1, s. 101–110 10 s.

    Publikation: Bidrag til tidsskriftTidsskriftartikelForskningfagfællebedømt

  2. Udgivet

    3D estimation of synaptic vesicle distributions in serial section transmission electron microscopy

    Khanmohammadi, M., Darkner, Sune, Nava, N., Nyengaard, J. R. & Sporring, Jon, 8 jun. 2013. 1 s.

    Publikation: KonferencebidragKonferenceabstrakt til konferenceForskningfagfællebedømt

  3. Udgivet

    A Highly Accurate Model Based Registration Method for FIB-SEM Images of Neurons

    Stephensen, Hans Jacob Teglbjærg, Darkner, Sune & Sporring, Jon, 2020, 8 s. (arXiv.org).

    Publikation: Bog/antologi/afhandling/rapportRapportForskning

  4. Udgivet

    A hyper elasticity method for interactive virtual design of hearing aids: a parallel method for general non-linear hyper elasticity modeling

    Darkner, Sune & Erleben, Kenny, 2011, I : Visual Computer. 27, 6, s. 645-653 9 s.

    Publikation: Bidrag til tidsskriftTidsskriftartikelForskningfagfællebedømt

  5. Udgivet

    A statistical model for simultaneous template estimation, bias correction, and registration of 3D brain images

    Pai, Akshay Sadananda Uppinakudru, Sommer, Stefan Horst, Raket, L. L., Kühnel, Line, Darkner, Sune, xfj310, xfj310 & Nielsen, Mads, 2017, Medical Computer Vision and Bayesian and Graphical Models for Biomedical Imaging: MICCAI 2016 International Workshops, MCV and BAMBI, Athens, Greece, October 21, 2016, Revised Selected Papers. Müller, H., Kelm, B. M., Arbel, T., Cai, W., Cardoso, M. J., Langs, G., Menze, B., Metaxas, D., Montillo, A., Wells, W. M., Zhang, S., Chung, A. C. S., Jenkinson, M. & Ribbens, A. (red.). Springer, s. 151-159 9 s. (Lecture notes in computer science, Bind 10081).

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  6. Udgivet

    Adaptive time-stepping in dieomorphic image registration with bounded inverse consistency error

    Pai, Akshay Sadananda Uppinakudru, Klein, S., Sommer, Stefan Horst, xfj310, xfj310, Darkner, Sune, Sporring, Jon & Nielsen, Mads, 2015, Proceedings of the fifth international workshop on Mathematical Foundations of Computational Anatomy (MFCA 2015) . INRIA, s. 35-47

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  7. Udgivet

    Adaptive time-stepping in diffeomorphic image registration with bounded inverse consistency error

    Pai, Akshay Sadananda Uppinakudru, Klein, S., Sommer, Stefan Horst, xfj310, xfj310, Darkner, Sune, Sporring, Jon & Nielsen, Mads, 2015, The 18th International Conference on Medical Image Computing and Computer Assisted Intervention: proceedings. Technische Universität München , s. 35-47 13 s.

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  8. Udgivet

    Automatic FDG-PET-based tumor and metastatic lymph node segmentation in cervical cancer

    Rodríguez Arbonès, D., Jensen, H. G., Loft, A., af Rosenschöld, P. M., Hansen, Anders Elias, Igel, Christian & Darkner, Sune, 2014, Medical Imaging 2014: Image Processing. Ourselin, S. & Styner, M. A. (red.). SPIE - International Society for Optical Engineering, 8 s. 903441. (Progress in Biomedical Optics and Imaging; Nr. 35, Bind 15).

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  9. Udgivet

    Automatic correction of dental artifacts in PET/MRI

    Ladefoged, C. N., Andersen, F. L., Keller, S., Beyer, T., Law, I., Højgaard, Liselotte, Darkner, Sune & Lauze, Francois Bernard, 2015, I : SPIE Journal of Medical Imaging. 2, 2, 13 s., 024009.

    Publikation: Bidrag til tidsskriftTidsskriftartikelForskningfagfællebedømt

  10. Udgivet

    Automatic measurement of wrist synovitis from contrast-enhanced MRI: a registration-centered approach

    Mysling, P., Darkner, Sune, Sporring, Jon, Dam, E. & Lillholm, Martin, 2013, Medical Imaging 2013: Image Processing. Ourselin, S. & Haynor, D. R. (red.). SPIE - International Society for Optical Engineering, 6 s. 86692U. (Progress in Biomedical Optics and Imaging; Nr. 36, Bind 14).

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  11. Udgivet

    Brain Segmentation in Rodent MR-Images Using Convolutional Neural Networks

    Sigurdsson, Björn, Darkner, Sune, Sommer, Stefan Horst, Mortensen, Kristian Nygaard, Sanggaard, S., Kostrikov, S. & Nedergaard, Maiken, 2018.

    Publikation: KonferencebidragKonferenceabstrakt til konferenceForskningfagfællebedømt

  12. Udgivet

    Collocation for diffeomorphic deformations in medical image registration

    Darkner, Sune, Pai, Akshay Sadananda Uppinakudru, Liptrot, M. G. & Sporring, Jon, 2018, I : I E E E Transactions on Pattern Analysis and Machine Intelligence. 40, 7, s. 1570-1583

    Publikation: Bidrag til tidsskriftTidsskriftartikelForskningfagfællebedømt

  13. Udgivet

    Combining the boundary shift integral and tensor-based morphometry for brain atrophy estimation

    Michalkiewicz, M. D., Pai, Akshay Sadananda Uppinakudru, Leung, K. K., Sommer, Stefan Horst, Darkner, Sune, xfj310, xfj310, Sporring, Jon & Nielsen, Mads, 2016, Medical imaging 2016: Image processing. Styner, M. A. & Angelini, E. D. (red.). SPIE - International Society for Optical Engineering, 6 s. 978406. (Progress in Biomedical Optics and Imaging).

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  14. Udgivet
  15. Udgivet

    Conforming contact manifolds for multibody simulations

    Visseq, V., Bonde, U., Erleben, Kenny & Darkner, Sune, 2014. 2 s.

    Publikation: KonferencebidragKonferenceabstrakt til konferenceForskning

  16. Udgivet

    Cube propagation for focal brain atrophy estimation

    Pai, Akshay Sadananda Uppinakudru, xfj310, xfj310, Darkner, Sune, Mysling, P., Jørgensen, D. R., Dam, E. B., Lillholm, Martin, Oh, J., Chen, G., Suhy, J., Sporring, Jon & Nielsen, Mads, 2013, 2013 IEEE 10th International Symposium on Biomedical Imaging. IEEE, s. 402-405 4 s.

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  17. Udgivet

    Data Driven Inverse Kinematics of Soft Robots using Local Models

    Holsten, Fredrik Dalland, Engell-norregard, M. P., Darkner, Sune & Erleben, Kenny, 2019, 2019 International Conference on Robotics and Automation (ICRA). IEEE, s. 6251-6257

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  18. Udgivet

    Data driven constraints for the SVM

    Darkner, Sune & Clemmensen, L. H., 2012, Machine Learning in Medical Imaging: Third International Workshop, MLMI 2012, Held in Conjunction with MICCAI 2012, Nice, France, October 1, 2012, Revised Selected Papers. Wang, F., Shen, D., Yan, P. & Suzuki, K. (red.). Springer, s. 70-77 8 s. (Lecture notes in computer science, Bind 7588).

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  19. Udgivet

    Deformation-based atrophy computation by surface propagation and its application to Alzheimer’s disease

    Pai, Akshay Sadananda Uppinakudru, Sporring, Jon, Darkner, Sune, Dam, Erik Bjørnager, Lillholm, Martin, Jørgensen, D., Oh, J., Chen, G., Suhy, J., xfj310, xfj310 & Nielsen, Mads, 2016, I : SPIE Journal of Medical Imaging. 3, 1, 11 s., 014005.

    Publikation: Bidrag til tidsskriftTidsskriftartikelForskningfagfællebedømt

  20. Udgivet

    Density-based non-rigid registration of diffusion-weighted images

    Jensen, H. G., Lauze, Francois Bernard, Nielsen, Mads & Darkner, Sune, apr. 2017.

    Publikation: KonferencebidragKonferenceabstrakt til konferenceForskningfagfællebedømt

  21. Udgivet

    Deterministic Group Tractography with Local Uncertainty Quantification

    Holm, Andreas Nugaard, Feragen, Aasa, Dela Haije, Tom & Darkner, Sune, 2019, Computational Diffusion: International MICCAI Workshop, Granada,. Bonet-Carne, E., Grussu, F., Ning, L., Sepehrband, F. & Tax, C. M. W. (red.). 226249 udg. Springer, s. 377-386 (Mathematics and Visualization).

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  22. Udgivet

    Diffeomorphic image registration with automatic time-step adjustment

    Pai, Akshay Sadananda Uppinakudru, Klein, S., Sommer, Stefan Horst, Darkner, Sune, Sporring, Jon & Nielsen, Mads, 2015, Biomedical Imaging (ISBI), 2015 IEEE 12th International Symposium on. IEEE, s. 1085-1088 4 s.

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  23. Udgivet

    Drift Corrector Software

    Stephensen, Hans Jacob Teglbjærg, Darkner, Sune & Sporring, Jon, 20 aug. 2019

    Publikation: Bidrag der ikke har en tekstformSoftwareprogramForskning

  24. Udgivet

    Efficient hyperelastic regularization for registration

    Darkner, Sune, Hansen, M. S., Larsen, R. & Hansen, M. F., 2011, Image Analysis: 17th Scandinavian Conference, SCIA 2011, Ystad, Sweden, May 2011. Proceedings. Heyden, A. & Kahl, F. (red.). Springer, s. 295-305 11 s. (Lecture notes in computer science, Bind 6688).

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  25. Udgivet

    Estimating the thickness of ultra thin sections for electron microscopy by image statistics

    Sporring, Jon, Khanmohammadi, M., Darkner, Sune, Nava, N., Nyengaard, J. R. & Jensen, E. B. V., 2014, 2014 IEEE International Symposium on Biomedical Imaging. IEEE, s. 157-160 4 s.

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

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