Bundle Geodesic Convolutional Neural Network for DWI Segmentation from Single Scan Learning

Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

We present a tissue classifier for Magnetic Resonance Diffusion Weighted Imaging (DWI) data trained from a single subject with a single b-value. The classifier is based on a Riemannian Deep Learning framework for extracting features with rotational invariance, where we extend a G-CNN learning architecture generically on a Riemannian manifold. We validate our framework using single-shell DWI data with a very limited amount of training data - only 1 scan. The proposed framework mainly consists of three layers: a lifting layer that locally represents and convolves data on tangent spaces to produce a family of functions defined on the rotation groups of the tangent spaces, i.e., a section of a bundle of rotational functions on the manifold; a group convolution layer that convolves this section with rotation kernels to produce a new section; and a projection layer using maximisation to collapse this local data to form new manifold based functions. We present an instantiation on the 2-dimensional sphere where the DWI orientation data is in general represented, and we use it for voxel classification. We show that this allows us to learn a classifier for cerebrospinal fluid (CSF) - subcortical - grey matter - white matter classification from only one scan.

OriginalsprogEngelsk
TitelComputational Diffusion MRI - 12th International Workshop, CDMRI 2021, Held in Conjunction with MICCAI 2021, Proceedings
RedaktørerSuheyla Cetin-Karayumak, Daan Christiaens, Matteo Figini, Pamela Guevara, Noemi Gyori, Vishwesh Nath, Tomasz Pieciak
ForlagSpringer
Publikationsdato2021
Sider121-132
ISBN (Trykt)9783030876142
DOI
StatusUdgivet - 2021
Begivenhed12th International Workshop on Computational Diffusion MRI, CDMRI 2021, held in conjunction with 24th International Conference on Medical Image Computing and Computer Assisted Intervention, MICCAI 2021 - Virtual, Online
Varighed: 1 okt. 20211 okt. 2021

Konference

Konference12th International Workshop on Computational Diffusion MRI, CDMRI 2021, held in conjunction with 24th International Conference on Medical Image Computing and Computer Assisted Intervention, MICCAI 2021
ByVirtual, Online
Periode01/10/202101/10/2021
NavnLecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
Vol/bind13006 LNCS
ISSN0302-9743

Bibliografisk note

Publisher Copyright:
© 2021, Springer Nature Switzerland AG.

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