Department of Computer Science

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  1. 2019
  2. Published

    Multi-view Consensus CNN for 3D Facial Landmark Placement

    Paulsen, R. R., Juhl, K. A., Haspang, T. M., Hansen, T., Ganz, Melanie & Einarsson, G., 2019, Computer Vision – ACCV 2018: 14th Asian Conference on Computer Vision, Perth, Australia, December 2–6, 2018, Revised Selected Papers, Part I. Springer, p. 706-719 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), Vol. 11361 LNCS).

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  3. Published

    Muscle fibre morphology and microarchitecture in cerebral palsy patients obtained by 3D synchrotron X-ray computed tomography

    Borg, L., Sporring, Jon, Dam, Erik Bjørnager, Dahl, V. A., Dyrby, T. B., Feidenhans'l, Robert Krarup, Dahl, A. B. & Pingel, Jessica, 2019, In: Computers in Biology and Medicine. 107, p. 265-269 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    On the initialization of long short-term memory networks

    Mehdipour Ghazi, Mostafa, Nielsen, Mads, Pai, A., Modat, M., Cardoso, M. J., Ourselin, S. & Sørensen, L., 2019, Neural Information Processing - 26th International Conference, ICONIP 2019, Proceedings. Gedeon, T., Wong, K. W. & Lee, M. (eds.). Springer VS, p. 275-286 12 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), Vol. 11953 LNCS).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  5. Published

    Optimization of preprocessing strategies in Positron Emission Tomography (PET) neuroimaging: A [11C]DASB PET study

    Nørgaard, M., Ganz, Melanie, Svarer, C., Frokjaer, V. G., Greve, D. N., Strother, S. C. & Knudsen, Gitte Moos, 2019, In: NeuroImage. 199, p. 466-479 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    Predicting Electrical Storm Using Episodes’ Parameters from ICD Recorded Data*

    Shakibfar, Saeed, Yazdchi, M. & Aliakbaryhosseinabadi, S., 2019, 41st Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE, p. 4885-4888

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  7. Published

    Preprocessing, Prediction and Significance: Framework and Application to Brain Imaging

    Nørgaard, M., Ozenne, Brice Maxime Hugues, Svarer, C., Frokjaer, V. G., Schain, M., Strother, S. C. & Ganz, Melanie, 2019, Medical Image Computing and Computer Assisted Intervention – MICCAI 2019: 22nd International Conference, Shenzhen, China, October 13–17, 2019, Proceedings, Part IV. Shen, D., Liu, T., Peters, T. M., Staib, L. H., Essert, C. & Zhou, S. (eds.). Springer, Vol. 11764. p. 196-204 9 p. (Lecture Notes in Computer Science, Vol. 11767).

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  8. Published

    Privacy-Preserving Crowd-Sourcing of Web Searches with Private Data Donor

    Primault, V., Lampos, V., Cox, Ingemar Johansson & De Cristofaro, E., 2019, WWW '19: The Web Conference 2019. Association for Computing Machinery, p. 1487-1497

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  9. Published

    SMEIL: A domain-specific language for synchronous message exchange networks

    Asheim, T., 2019, Communicating Process Architectures 2017 and 2018, WoTUG-39 and WoTUG-40 - Proceedings of CPA 2017 (WoTUG-39) and Proceedings of CPA 2018 (WoTUG-40). Pedersen, J. B., Chalmers, K., Broenink, J. F., Vinter, B., Vella, K., Welch, P. H., Smith, M. L. & Skovhede, K. (eds.). IMIA and IOS Press, p. 389-414 (Concurrent Systems Engineering Series, Vol. 70).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  10. Published

    Segmentation of 2D and 3D Objects with Intrinsically Similarity Invariant Shape Regularisers

    Hansen, J. D. K. & Lauze, Francois Bernard, 2019, Scale Space and Variational Methods in Computer Vision - 7th International Conference, SSVM 2019, Proceedings. Lellmann, J., Modersitzki, J. & Burger, M. (eds.). Springer, p. 369-380 12 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), Vol. 11603 LNCS).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  11. Published

    Sensitivity of screening mammography by density and texture: a cohort study from a population-based screening program in Denmark

    von Euler-Chelpin, My Catarina, Lillholm, Martin, Vejborg, I., Nielsen, Mads & Lynge, Elsebeth, 2019, In: Breast Cancer Research. 21, 1

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Published

    Small steps in physics simulation

    Macklin, M., Storey, K., Lu, M., Terdiman, P., Chentanez, N., Jeschke, S. & Müller, M., 2019, SCA '19: Proceedings of the 18th annual ACM SIGGRAPH/Eurographics Symposium on Computer Animation. ACM Association for Computing Machinery, p. 1-7

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  13. Published

    Stereotyping in Globally distributed Collaboration: A CSCW Thesis on Global Software Development.

    Matthiesen, S., 2019, Department of Computer Science, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  14. Published

    Structural connectivity analysis using finsler geometry

    Dela Haije, T., Savadjiev, P., Fuster, A., Schultz, R. T., Verma, R., Florack, L. & Westin, C. F., 2019, In: SIAM Journal on Imaging Sciences. 12, 1, p. 551-575 25 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Published

    The Influence of Hand Size on Touch Accuracy

    Larsen, J. N., Jacobsen, T. H., Boring, S., Bergström, Joanna & Pohl, H., 2019, Proceedings of the 21st International Conference on Human-Computer Interaction with Mobile Devices and Services. Association for Computing Machinery, 11 p. 4

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  16. Published

    The PCNA interaction motifs revisited: thinking outside the PIP-box

    Prestel, Andreas, Wichmann, N., Martins, J. M., Marabini, R., Kassem, N., Broendum, S. S., Otterlei, M., Nielsen, Olaf, Willemoës, Martin, Ploug, Michael, Boomsma, Wouter & Kragelund, Birthe Brandt, 2019, In: Cellular and Molecular Life Sciences. 76, 24, p. 4923-4943

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. Published

    The structure of the serotonin system: a PET imaging study

    Beliveau, V., Ozenne, Brice Maxime Hugues, Strother, S., Greve, D. N., Svarer, C., Knudsen, Gitte Moos & Ganz, Melanie, 2019, In: Journal of Cerebral Blood Flow and Metabolism. 39, p. 614-615 2 p.

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  18. Published

    Training recurrent neural networks robust to incomplete data: application to Alzheimer’s disease progression modeling

    Mehdipour Ghazi, Mostafa, Nielsen, Mads, Pai, A. S. U., Cardoso, M. J., Modat, M., Ourselin, S. & Sørensen, L., 2019, In: Medical Image Analysis. 53, p. 39-46

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. Published

    Transfer Learning for Unsupervised Influenza-like Illness Models from Online Search Data

    Zou, B., Lampos, V. & Cox, Ingemar Johansson, 2019, WWW '19: The World Wide Web Conference. Association for Computing Machinery, p. 2505-2516

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  20. Published

    UNSUPERVISED MACHINE LEARNING ON BASELINE BRAIN MRI IDENTIFIES MCI SUBGROUP WITH A FASTER DECLINE OVER TWO YEARS COMPARED TO CLASSICAL HIPPOCAMPAL SPARING AD SUBTYPE

    Sørensen, L., Pai, A., Nielsen, Mads, Leverenz, J. B. & Pillai, J. A., 2019, In: Alzheimer's & Dementia. 15, 7, p. P1420 1 p., P4-326.

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  21. Published

    X-WikiRE: A Large, Multilingual Resource for Relation Extraction as Machine Comprehension

    Abdou, M., Sas, C., Aralikatte, R., Augenstein, Isabelle & Søgaard, Anders, 2019, Proceedings of the 2nd Workshop on Deep Learning Approaches for Low-Resource NLP (DeepLo 2019). Association for Computational Linguistics, p. 265-274

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  22. 2018
  23. Published

    Pre-intervention test-retest reliability of EEG and ERP over four recording intervals

    Ip, C., Ganz, Melanie, Ozenne, Brice Maxime Hugues, Sluth, L. B., Gram, M., Viardot, G., l'Hostis, P., Danjou, P., Knudsen, Gitte Moos & Christensen, S. R., 1 Dec 2018, In: International Journal of Psychophysiology. 134, p. 30-43

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Published

    An O(log k)-Competitive Algorithm for Generalized Caching

    Adamaszek, A., Czumaj, A., Englert, M. & Räcke, H., 16 Nov 2018, In: ACM Transactions on Algorithms. 15, 1, p. 1-18 6.

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    Transfer learning for multicenter classification of chronic obstructive pulmonary disease

    Cheplygina, V., Peña, I. P., Pedersen, J. J. H., Lynch, D. A., Sørensen, L. & de Bruijne, Marleen, Sep 2018, In: IEEE Journal of Biomedical and Health Informatics. 22, 5, p. 1486 - 1496

    Research output: Contribution to journal › Journal article › Research › peer-review

  26. Published

    Veros v0.1-a fast and versatile ocean simulator in pure Python

    Hafner, D., Jacobsen, R. L., Eden, C., Kristensen, M. R. B., Jochum, Markus, Nuterman, Roman & Vinter, B., 16 Aug 2018, In: Geoscientific Model Development. 11, 8, p. 3299-3312

    Research output: Contribution to journal › Journal article › Research › peer-review

  27. Published

    Concrete Semantics with Coq and CoqHammer

    Czajka, Ł., Ekici, B. & Kaliszyk, C., 18 Jul 2018, Intelligent Computer Mathematics: 11th International Conference, CICM 2018 Hagenberg, Austria, August 13–17, 2018 Proceedings. Rabe, F., Farmer, W. M., Passmore, G. O. & Youssef, A. (eds.). Springer, p. 53-59 5. (Lecture Notes in Computer Science, Vol. 11006).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  28. Published

    Power of d choices with simple tabulation

    Aamand, Anders, Knudsen, M. B. T. & Thorup, Mikkel, 1 Jul 2018, 45th International Colloquium on Automata, Languages, and Programming, ICALP 2018. Kaklamanis, C., Marx, D., Chatzigiannakis, I. & Sannella, D. (eds.). Schloss Dagstuhl- Leibniz-Zentrum fur Informatik GmbH, Dagstuhl Publishing, 14 p. 5. (Leibniz International Proceedings in Informatics, LIPIcs, Vol. 107).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  29. Published

    Safety and Efficacy of Mesenchymal Stem Cells for Radiation-Induced Xerostomia: A Randomized, Placebo-Controlled Phase 1/2 Trial (MESRIX)

    Grønhøj, C., Jensen, D. H., Vester-Glowinski, Peter Viktor, Jensen, S. B., Bardow, A., Oliveri, R. S., Fog, L. M., Specht, Lena, Thomsen, C., Darkner, Sune, Jensen, M., Müller, V., Kiss, K., Agander, T., Andersen, E., Fischer-Nielsen, A. & von Buchwald, Christian, 1 Jul 2018, In: International Journal of Radiation Oncology, Biology, Physics. 101, 3, p. 581-592 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  30. Published

    TiltStacks: Composing shape-changing interfaces using tilting and stacking of modules

    Tiab, J., Boring, S., Strohmeier, P., Markussen, A., Alexander, J. & Hornbæk, Kasper, 29 May 2018, AVI 2018 - Proceedings of the 2018 International Conference on Advanced Visual Interfaces. Catarci, T., Marrella, A., Leotta, F. & Mecella, M. (eds.). Association for Computing Machinery, a44

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  31. Published

    Function Point Analysis FPA on A Team Planning Website Based on PHP and MYSQL

    Lassen, Anders, 18 May 2018, In: Journal of Information Technology and Software Engineering. 8, 3, 5 p., 237.

    Research output: Contribution to journal › Journal article › Research › peer-review

  32. Published

    It’s a Wrap: Mapping On-Skin Input to Off-Skin Displays

    Bergström, Joanna, Hornbæk, Kasper & Boring, S., 20 Apr 2018, CHI '18 Proceedings of the 2018 CHI Conference on Human Factors in Computing Systems. Association for Computing Machinery, 564

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  33. Published

    Subclinical depressive symptoms during late midlife and structural brain alterations: A longitudinal study of Danish men born in 1953

    Osler, Merete, Sørensen, L., Rozing, M., Calvo, O. P., Nielsen, Mads & Rostrup, E., Apr 2018, In: Human Brain Mapping. 39, 4, p. 1789-1795

    Research output: Contribution to journal › Journal article › Research › peer-review

  34. Published

    Discourse-aware rumour stance classification in social media using sequential classifiers

    Zubiaga, A., Kochkina, E., Liakata, M., Procter, R., Lukasik, M., Bontcheva, K., Cohn, T. & Augenstein, Isabelle, Mar 2018, In: Information Processing & Management. 54, 2, p. 273-290

    Research output: Contribution to journal › Journal article › Research › peer-review

  35. Published

    Blockchains for Business Process Management - Challenges and Opportunities

    Mendling, J., Weber, I., van der Aalst, W., Brocke, J. V., Cabanillas, C., Daniel, F., Debois, S., Di Ciccio, C., Dumas, M., Dustdar, S., Gal, A., Garcia-Banuelos, L., Governatori, G., Hull, R., La Rosa, M., Leopold, H., Leymann, F., Recker, J., Reichert, M., Reijers, H. A. & 12 others, Rinderle-Ma, S., Solti, A., Rosemann, M., Schulte, S., Singh, M. P., Slaats, Tijs, Staples, M., Weber, B., Weidlich, M., Weske, M., Xu, X. & Zhu, L., Feb 2018, In: ACM Transactions on Management Information Systems. 9, 1, 16 p., 4.

    Research output: Contribution to journal › Journal article › Research › peer-review

  36. Published

    Driving Structural Transitions in Molecular Simulations Using the Nonequilibrium Candidate Monte Carlo

    Kurut, A., Fonseca, R. & Boomsma, Wouter, 25 Jan 2018, In: Journal of Physical Chemistry Part B: Condensed Matter, Materials, Surfaces, Interfaces & Biophysical. 122, 3, p. 1195-1204

    Research output: Contribution to journal › Journal article › Research › peer-review

  37. Published

    Hierarchical Clustering: Objective Functions and Algorithms

    Cohen-addad, V., Kanade, V., Mallmann-trenn, F. & Mathieu, C., 2 Jan 2018, Proceedings of the Twenty-Ninth Annual ACM-SIAM Symposium on Discrete Algorithms. Czumaj, A. (ed.). Society for Industrial and Applied Mathematics, p. 378-397

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  38. Published

    Sparse incomplete LU-decomposition for wave farm designs under realistic conditions

    Arbonès, D. R., Sergiienko, N. Y., Ding, B., Krause, Oswin, Igel, Christian & Wagner, M., 1 Jan 2018, Parallel Problem Solving from Nature – PPSN XV: 15th International Conference, 2018, Proceedings. Springer, p. 512-524 13 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), Vol. 11101 LNCS).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  39. Published

    Stateful load balancing for parallel stream processing

    Guo, Q. & Zhou, Yongluan, 1 Jan 2018, Euro-Par 2017: Parallel Processing Workshops. Heras, D. B., Bougé, L., Mencagli, G., Jeannot, E., Sakellariou, R., Badia, R. M., Barbosa, J. G., Ricci, L., Scott, S. L., Lankes, S. & Weidendorfer, J. (eds.). Springer, p. 80-93 14 p. (Lecture notes in computer science, Vol. 10659).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  40. Published

    Graph Processing on GPUs: A Survey

    Shi, X., Zheng, Z., Zhou, Yongluan, Jin, H., He, L., Liu, B. & Hua, Q., Jan 2018, In: A C M Computing Surveys. 50, 6, 35 p., 81.

    Research output: Contribution to journal › Review › Research › peer-review

  41. Published

    A Near-Linear Approximation Scheme for Multicuts of Embedded Graphs with a Fixed Number of Terminals

    Cohen-addad, V., De Verdière, É. C. & De Mesmay, A., 2018, Proceedings of the Twenty-Ninth Annual ACM-SIAM Symposium on Discrete Algorithms. Czumaj, A. (ed.). Society for Industrial and Applied Mathematics, p. 1439-1458

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  42. Published

    A categorical foundation for structured reversible flowchart languages

    Glück, Robert & Kaarsgaard, R., 2018, In: Electronic Notes in Theoretical Computer Science. 336, p. 155-171

    Research output: Contribution to journal › Journal article › Research › peer-review

  43. Published

    A categorical foundation for structured reversible flowchart languages: Soundness and adequacy

    Glück, Robert & Kaarsgaard, R., 2018, In: Logical Methods in Computer Science. 14, 3, 38 p., 16.

    Research output: Contribution to journal › Journal article › Research › peer-review

  44. Published

    A fast approximation scheme for low-dimensional k-means

    Cohen-Addad, V., 2018, Proceedings of the Twenty-Ninth Annual ACM-SIAM Symposium on Discrete Algorithms . Czumaj, A. (ed.). Society for Industrial and Applied Mathematics, p. 430-440

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  45. Published

    ARRIVAL: Next stop in CLS

    Gärtner, B., Hansen, T. D., Hubácek, P., Král, K., Mosaad, H. & Slívová, V., 2018, 45th International Colloquium on Automata, Languages, and Programming, ICALP 2018. Chatzigiannakis, I., Kaklamanis, C., Marx, D. & Sannella, D. (eds.). Schloss Dagstuhl- Leibniz-Zentrum fur Informatik GmbH, Dagstuhl Publishing, 13 p. 60. (Leibniz International Proceedings in Informatics, LIPIcs, Vol. 107).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  46. Published

    Analysis of synchrotron X-ray tomographic data: Reconstruction and application

    Borg, L., 2018, Department of Computer Science, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  47. Published

    Automatic Motility Analysis of Human Sperm

    Nissen, M. S., 2018, Department of Computer Science, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  48. Published

    Better tradeoffs for exact distance oracles in planar graphs

    Gawrychowski, P., Mozes, S., Weimann, O. & Wulff-Nilsen, Christian, 2018, Proceedings of the Twenty-Ninth Annual ACM-SIAM Symposium on Discrete Algorithms . Czumaj, A. (ed.). Society for Industrial and Applied Mathematics, p. 515-529

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  49. Published

    Biomedical Image Registration: 8th International Workshop, WBIR 2018, Leiden, The Netherlands, June 28-29, 2018, Proceedings

    Klein, S. (ed.), Staring, M. (ed.), Durrleman, S. (ed.) & Sommer, Stefan Horst (ed.), 2018, Springer. 127 p. (Image Processing, Computer Vision, Pattern Recognition, and Graphics, Vol. 10883).

    Research output: Book/Report › Anthology › Research › peer-review

  50. Published

    Brain Segmentation in Rodent MR-Images Using Convolutional Neural Networks

    Sigurdsson, B., Darkner, Sune, Sommer, Stefan Horst, Mortensen, K. N., Sanggaard, S., Kostrikov, S. & Nedergaard, Maiken, 2018.

    Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

  51. Published

    Chains, antichains, and complements in infinite partition lattices

    Avery, James Emil, Moyen, J., Ruzicka, P. & Simonsen, Jakob Grue, 2018, In: Algebra Universalis. 79, 37, 21 p., 37.

    Research output: Contribution to journal › Journal article › Research › peer-review

  52. Published

    Chunked Bounding Volume Hierarchies for fast digital prototyping using volumetric meshes

    Schmidtke, R. & Erleben, Kenny, 2018, In: IEEE Transactions on Visualization and Computer Graphics. 24, 12, p. 3044-3057

    Research output: Contribution to journal › Journal article › Research › peer-review

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