Department of Computer Science

  1. 2024
  2. Accepted/In press

    Doorways Do Not Always Cause Forgetting: Studying the Effect of Locomotion Technique and Doorway Visualization in Virtual Reality

    van Gemert, Thomas, Kalaitzoglou, Ioannis, Chew, S. & Bergström, Joanna, 2024, (Accepted/In press) CHI '24: Proceedings of the 2024 CHI Conference on Human Factors in Computing Systems. New York, NY, United States: Association for Computing Machinery

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

  3. Published

    OpenMS 3 enables reproducible analysis of large-scale mass spectrometry data

    Pfeuffer, J., Bielow, C., Wein, S., Jeong, K., Netz, E., Walter, A., Alka, O., Nilse, L., Colaianni, P. D., McCloskey, D., Kim, J., Rosenberger, G., Bichmann, L., Walzer, M., Veit, J., Boudaud, B., Bernt, M., Patikas, N., Pilz, M., Startek, M. P. & 12 others, Kutuzova, Svetlana, Heumos, L., Charkow, J., Sing, J. C., Feroz, A., Siraj, A., Weisser, H., Dijkstra, T. M. H., Perez-Riverol, Y., Röst, H., Kohlbacher, O. & Sachsenberg, T., 2024, In: Nature Methods. 21, 3, p. 365–367

    Research output: Contribution to journalLetterpeer-review

  4. 2023
  5. Published
  6. Published

    A complete characterization of infinitely repeated two-player games having computable strategies with no computable best response under limit-of-means payoff

    Dargaj, J. & Simonsen, Jakob Grue, 2023, In: Journal of Economic Theory. 213, 24 p., 105713.

    Research output: Contribution to journalJournal articlepeer-review

  7. Published

    Best-of-Both-Worlds Learning in Bandits with Delayed Feedback

    Masoudian, Saeed, 2023, Department of Computer Science, Faculty of Science, University of Copenhagen. 166 p.

    Research output: Book/ReportPh.D. thesis

  8. Published

    Constructing Concise Convex Covers via Clique Covers

    Abrahamsen, Mikkel, Meyling, William Bille & Nusser, André Fritz, 2023, 39th International Symposium on Computational Geometry, SoCG 2023. Chambers, E. W. & Gudmundsson, J. (eds.). Schloss Dagstuhl- Leibniz-Zentrum fur Informatik GmbH, Dagstuhl Publishing, p. 1-9 66. (Leibniz International Proceedings in Informatics, LIPIcs, Vol. 258).

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

  9. Published
  10. Published

    Deep learning and computer vision techniques for microcirculation analysis: A review

    Helmy, M., Truong, T. T., Jul, Eric & Ferreira, P., 2023, In: Patterns. 4, 1, 100641.

    Research output: Contribution to journalReviewpeer-review

  11. Published

    Delayed Bandits: When Do Intermediate Observations Help?

    Esposito, E., Masoudian, Saeed, Qiu, H., van der Hoeven, D., Cesa-Bianchi, N. & Seldin, Yevgeny, 2023, Proceedings of the 40 th International Conference on Machine Learnin. PMLR, p. 9374-9395 22 p. (Proceedings of Machine Learning Research, Vol. 202).

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

  12. Published

    Delivering Rules-Based Workflows for Science

    Marchant, David Gray, Blomqvist, M., Jensen, Thomas Philip, Lilholm, Iben & Nørgaard, Martin, 2023, Proceedings of 2023 SC Workshops of the International Conference on High Performance Computing, Network, Storage, and Analysis, SC Workshops 2023. Association for Computing Machinery, Inc., p. 2000-2008 (ACM International Conference Proceeding Series).

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

  13. Published

    Diffusivity-limited q-space trajectory imaging

    Boito, D., Herberthson, M., Dela Haije, T., Blystad, I. & Özarslan, E., 2023, In: Magnetic Resonance Letters. 3, 2, p. 187-196

    Research output: Contribution to journalJournal articlepeer-review

  14. Published

    Efficient Self-Supervision using Patch-based Contrastive Learning for Histopathology Image Segmentation

    Boserup, Nicklas & Selvan, Raghav, 2023, Proceedings of the Northern Lights Deep Learning Workshop 2023. Septentrio Academic Publishing, 8 p. (Proceedings of the Northern Lights Deep Learning Workshop, Vol. 4).

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

  15. Published

    Fast detection of slender bodies in high density microscopy data

    Alonso, Albert & Kirkegaard, Julius Bier, 2023, In: Communications Biology . 6, 1, 12 p., 754.

    Research output: Contribution to journalJournal articlepeer-review

  16. Published

    High-Entropy Oxides in the Mullite-Type Structure

    Kirsch, Andrea, Bøjesen, E. D., Lefeld, N., Larsen, R., Mathiesen, J. K., Skjærvø, S. L., Pittkowski, Rebecca Katharina, Sheptyakov, D. & Jensen, Kirsten Marie Ørnsbjerg, 2023, In: Chemistry of Materials. 35, 20, p. 8664−8674 11 p.

    Research output: Contribution to journalJournal articlepeer-review

  17. Published

    Instance-Specific Augmentation of Brain MRIs with Variational Autoencoders

    Middleton, Jon Anthony, Bauer, Marko, Johansen, Jacob, Nielsen, Mads, Sommer, Stefan Horst & Pai, A. S. U., 2023, Medical Applications with Disentanglements : First MICCAI Workshop, MAD 2022, Held in Conjunction with MICCAI 2022, Singapore, September 22, 2022, Proceedings. Springer, p. 49-58 (Lecture Notes in Computer Science, Vol. 13823).

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

  18. Published

    Interactive visual facets to support fluid exploratory search

    He, C., Micallef, L., Serim, B., Vuong, T., Ruotsalo, T. & Jacucci, G., 2023, In: Journal of Visualization. 26, p. 211–230

    Research output: Contribution to journalJournal articlepeer-review

  19. Published

    LR-CSNet: Low-Rank Deep Unfolding Network for Image Compressive Sensing

    Zhang, T., Li, Lei, Igel, Christian, Oehmcke, Stefan, Gieseke, F. & Peng, Z., 2023, 2022 IEEE International Conference on Computer and Communications (ICCC), Chengdu, China. IEEE, p. 1951-1957

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

  20. Published

    MULTIFIN: A Dataset for Multilingual Financial NLP

    Jørgensen, R. K., Brandt, O., Hartmann, M., Dai, X., Igel, Christian & Elliott, Desmond, 2023, EACL 2023 - 17th Conference of the European Chapter of the Association for Computational Linguistics, Findings of EACL 2023. Association for Computational Linguistics (ACL), p. 864-879

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

  21. Published

    On Evaluating Multilingual Compositional Generalization with Translated Datasets

    Wang, Zi & Hershcovich, Daniel, 2023, Proceedings of the 61st Annual Meeting of the Association for Computational Linguistics (Volume 1: Long Papers). Association for Computational Linguistics (ACL), p. 1669-1687

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

  22. Published

    Optimal Decremental Connectivity in Non-Sparse Graphs

    Aamand, A., Karczmarz, A., Łącki, J., Parotsidis, N., Rasmussen, Peter Michael Reichstein & Thorup, Mikkel, 2023, 50th International Colloquium on Automata, Languages, and Programming, ICALP 2023. Etessami, K., Feige, U. & Puppis, G. (eds.). Schloss Dagstuhl - Leibniz-Zentrum für Informatik, p. 1-17 6. (Leibniz International Proceedings in Informatics, LIPIcs, Vol. 261).

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

  23. Published

    Probing Pre-Trained Language Models for Cross-Cultural Differences in Values

    Arora, Arnav, Kaffee, L. & Augenstein, Isabelle, 2023, Proceedings of the First Workshop on Cross-Cultural Considerations in NLP (C3NLP). Association for Computational Linguistics (ACL), p. 114-130

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

  24. Published

    Rove-Tree-11: The not-so-Wild Rover. A hierarchically structured image dataset for deep metric learning research

    Hunt, Roberta Eleanor & Steenstrup Pedersen, Kim, 2023, Computer Vision – ACCV 2022: 16th Asian Conference on Computer Vision, Macao, China, December 4–8, 2022, Proceedings, Part I. Springer, p. 2967-2983 (Lecture Notes in Computer Science, Vol. 13841).

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

  25. Published

    The efficiency of artificial intelligence methods for finding radiographic features in different endodontic treatments - a systematic review

    bzd222, bzd222, Dascalu, Tudor-Laurentiu, Bakhshandeh, Azam, Ibragimov, Bulat, Kvist, T., EndoReCo, E. & Bjørndal, Lars, 2023, In: Acta Odontologica Scandinavica. 81, 6, p. 422-435 14 p.

    Research output: Contribution to journalReviewpeer-review

  26. Published

    Tiling with Squares and Packing Dominos in Polynomial Time

    Aamand, A., Abrahamsen, Mikkel, Rasmussen, Peter Michael Reichstein & Ahle, T. D., 2023, In: ACM Transactions on Algorithms. 19, 3, p. 1-28 30.

    Research output: Contribution to journalJournal articlepeer-review

  27. Published

    Towards a Dereversibilizer: Fewer Asserts, Statically

    Reholt, Jonas Wolpers, Glück, Robert & Kruse, M., 2023, Reversible Computation - 15th International Conference, RC 2023, Proceedings. Kutrib, M. & Meyer, U. (eds.). Springer, p. 106-114 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), Vol. 13960 LNCS).

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

  28. 2022
  29. Published

    Energy Consumption-Aware Tabular Benchmarks for Neural Architecture Search

    Bakhtiarifard, Pedram, Igel, Christian & Selvan, Raghav, 12 Oct 2022, arxiv.org, 13 p.

    Research output: Working paperPreprintResearch

  30. Published

    Constructing light spanners deterministically in near-linear time

    Alstrup, Stephen, Dahlgaard, S., Filtser, A., Stöckel, M. & Wulff-Nilsen, Christian, 12 Mar 2022, In: Theoretical Computer Science. 907, p. 82-112

    Research output: Contribution to journalJournal articlepeer-review

  31. Published

    The Art Gallery Problem is ∃ℝ-complete

    Abrahamsen, Mikkel, Adamaszek, A. & Miltzow, T., 28 Feb 2022, In: Journal of the ACM. 69, 1, p. 1-70 4.

    Research output: Contribution to journalJournal articlepeer-review

  32. Published

    A Near-Optimal Best-of-Both-Worlds Algorithm for Online Learning with Feedback Graphs

    Rouyer, C., van der Hoeven, D., Cesa-Bianchi, N. & Seldin, Yevgeny, 2022, Advances in Neural Information Processing Systems (NeurIPS).

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

  33. Published

    A context-dependent and disordered ubiquitin-binding motif

    Dreier, Jesper Elmsted, Prestel, Andreas, Martins, J. M., Brøndum, S. S., Nielsen, Olaf, Garbers, Anna Engstrøm, Suga, H., Boomsma, Wouter, Rogers, Joseph Matthew, Hartmann-Petersen, Rasmus & Kragelund, Birthe Brandt, 2022, In: Cellular and molecular life sciences : CMLS. 79, 9, 21 p., 484.

    Research output: Contribution to journalJournal articlepeer-review

  34. Published

    Auto-segmentation of Hip Joints Using MultiPlanar UNet with Transfer Learning

    Xu, Peidi, Moshfeghifar, Faezeh, Gholamalizadeh, T., Nielsen, Michael Bachmann, Erleben, Kenny & Darkner, Sune, 2022, Medical Image Learning with Limited and Noisy Data: First International Workshop, MILLanD 2022 Held in Conjunction with MICCAI 2022 Singapore, September 22, 2022 Proceedings. Zamzmi, G., Antani, S., Rajaraman, S., Xue, Z., Bagci, U. & Linguraru, M. G. (eds.). Springer Science and Business Media Deutschland GmbH, p. 153-162 10 p. (Medical Image Learning with Limited and Noisy Data, Vol. 13559).

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

  35. Published

    Benefits of auxiliary information in deep learning-based teeth segmentation

    Dascalu, Tudor-Laurentiu, Kuznetsov, A. & Ibragimov, Bulat, 2022, Medical Imaging 2022: Image Processing. Colliot, O., Isgum, I., Landman, B. A. & Loew, M. H. (eds.). SPIE, p. 1-9 1203232. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE, Vol. 12032).

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

  36. Published

    Body-based user interfaces

    Strohmeier, P., Mottelson, A., Pohl, H., McIntosh, J., Knibbe, J., Bergström, Joanna, Jansen, Y. & Hornbæk, Kasper, 2022, The Routledge Handbook of Bodily Awareness. Taylor and Francis/Routledge, p. 478-502

    Research output: Chapter in Book/Report/Conference proceedingBook chapterResearchpeer-review

  37. Published

    Can AMR Assist Legal and Logical Reasoning?

    Schrack, Nikolaus Alexander, Cui, Ruixiang, López, H. A. & Hershcovich, Daniel, 2022, Findings of the Association for Computational Linguistics: EMNLP 2022. Association for Computational Linguistics, p. 1555-1568

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearch

  38. Published

    Carbon Footprint of Selecting and Training Deep Learning Models for Medical Image Analysis

    Selvan, Raghav, Bhagwat, N., Anthony, L. F. W., Kanding, B. & Dam, Erik Bjørnager, 2022, Medical Image Computing and Computer Assisted Intervention – MICCAI 2022: 25th International Conference Singapore, September 18–22, 2022 Proceedings, Part V. Springer, p. 506–516 (Lecture Notes in Computer Science, Vol. 13435).

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

  39. Published

    DOREEN: A Game of Provocations Creating New Ambitions for Equity in Computing through Intertextual Design

    Vej, J., Borsotti, Valeria, Savage, Valkyrie Arline, Engell-Nørregård, M. P. & Bjorn, Pernille, 2022, Proceedings of the 12th Nordic Conference on Human-Computer Interaction. Association for Computing Machinery, p. 1-8

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

  40. Published

    Discounted Repeated Games Having Computable Strategies with No Computable Best Response under Subgame-Perfect Equilibria

    Dargaj, J. & Simonsen, Jakob Grue, 2022, In: ACM Transactions on Economics and Computation. 10, 1, p. 1-39 3.

    Research output: Contribution to journalJournal articlepeer-review

  41. Published
  42. Published

    Few-Shot Cross-Lingual Stance Detection with Sentiment-Based Pre-Training

    Hardalov, M., Arora, Arnav, Nakov, P. & Augenstein, Isabelle, 2022, In: Proceedings of the International Joint Conference on Artificial Intelligence. 36, 10, p. 10729-10737.

    Research output: Contribution to journalConference articlepeer-review

  43. Published

    High accuracy in classifying endoscopic severity in ulcerative colitis using convolutional neural network

    Lo, B., Liu, Z., Bendtsen, Flemming, Igel, Christian, Vind, Ida & Burisch, J., 2022, In: The American Journal of Gastroenterology. 117, 10, p. 1648-1654

    Research output: Contribution to journalJournal articlepeer-review

  44. Published

    Hyperspectral imaging for classification of bulk grain samples with deep convolutional neural networks

    Dreier, E. S., Sørensen, Klavs Martin, Lund-Hansen, T., Jespersen, Birthe P Møller & Steenstrup Pedersen, Kim, 2022, In: Journal of Near Infrared Spectroscopy. 30, 3, p. 107–121

    Research output: Contribution to journalJournal articlepeer-review

  45. Published

    Identifying Partial Mouse Brain Microscopy Images from the Allen Reference Atlas Using a Contrastively Learned Semantic Space

    Antanavicius, J., Leiras, Roberto & Selvan, Raghav, 2022, Biomedical Image Registration - 10th International Workshop, WBIR 2022, Proceedings. Hering, A., Schnabel, J., Zhang, M., Ferrante, E., Heinrich, M. & Rueckert, D. (eds.). 1 ed. Springer Science and Business Media Deutschland GmbH, p. 166-176 11 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), Vol. 13386 LNCS).

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

  46. Published

    Improved Multi-label Classification under Temporal Concept Drift: Rethinking Group-Robust Algorithms in a Label-Wise Setting

    Chalkidis, Ilias & Søgaard, Anders, 2022, FINDINGS OF THE ASSOCIATION FOR COMPUTATIONAL LINGUISTICS (ACL 2022). ASSOC COMPUTATIONAL LINGUISTICS-ACL, p. 2441-2454 14 p.

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

  47. Published

    Information-Theoretic Registration with Explicit Reorientation of Diffusion-Weighted Images

    Jensen, H. G., Lauze, Francois Bernard & Darkner, Sune, 2022, In: Journal of Mathematical Imaging and Vision. 64, p. 1-16

    Research output: Contribution to journalJournal articlepeer-review

  48. Published

    Interpreting Latent Spaces of Generative Models for Medical Images using Unsupervised Methods

    Schön, Julian Elisha, Selvan, Raghav & Petersen, Jens, 2022, Deep Generative Models: Second MICCAI Workshop, DGM4MICCAI 2022, Held in Conjunction with MICCAI 2022, Singapore, September 22, 2022, Proceedings. Springer, p. 24-33 (Lecture Notes in Computer Science, Vol. 13609).

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

  49. Published

    Meiotic drive in chronic lymphocytic leukemia compared with other malignant blood disorders

    Jønsson, V., Awan, H., Jones, N. D., Johannesen, T. B., Thøgersen, K., Steig, B., Andorsdottir, G. & Tjønnfjord, G. E., 2022, In: Scientific Reports. 12, 1, p. 1-11 6138.

    Research output: Contribution to journalJournal articlepeer-review

  50. Published

    No Repetition: Fast and Reliable Sampling with Highly Concentrated Hashing

    Aamand, A., Das, D., Kipouridis, Evangelos, Knudsen, J. B. T., Rasmussen, Peter Michael Reichstein & Thorup, Mikkel, 2022, In: Proceedings of the VLDB Endowment. 15, 13, p. 3989-4001

    Research output: Contribution to journalConference articlepeer-review

  51. Published

    Probing Pre-Trained Language Models for Cross-Cultural Differences in Values

    Arora, Arnav, Kaffee, L. F. & Augenstein, Isabelle, 2022, arxiv.org, 11 p.

    Research output: Working paperPreprintResearch

  52. Published

    RootPainter3D: Interactive-machine-learning enables rapid and accurate contouring for radiotherapy

    Smith, Abraham George, Petersen, Jens, Terrones-Campos, C., Berthelsen, A. K., Forbes, N. J., Darkner, Sune, Specht, Lena & Vogelius, I. R., 2022, In: Medical Physics. 49, 1, p. 461-473

    Research output: Contribution to journalJournal articlepeer-review

  53. Published

    TempEL: Linking Dynamically Evolving and Newly Emerging Entities

    Zaporojets, K., Kaffee, L. F., Deleu, J., Demeester, T., Develder, C. & Augenstein, Isabelle, 2022, Advances in Neural Information Processing Systems 35 (NeurIPS 2022). NeurIPS Proceedings, 17 p. (Advances in Neural Information Processing Systems, Vol. 35).

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

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