Erik Bjørnager Dam

Erik Bjørnager Dam

Professor

Member of:

    ORCID: 0000-0002-8888-2524

    Publication year:
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    1 - 25 out of 60Page size: 25
    1. 2024
    2. Published

      Equity through Access: A Case for Small-scale Deep Learning

      Selvan, Raghav, Pepin, B., Igel, Christian, Samuel, G. & Dam, Erik Bjørnager, 19 Mar 2024.

      Research output: Working paper › Preprint › Research

    3. Published

      Fully Automated Tumor Segmentation for Brain MRI data using Multiplanner UNet

      Pandey, Sumit, Changdar, Satyasaran, Perslev, Mathias & Dam, Erik Bjørnager, 12 Jan 2024.

      Research output: Working paper › Preprint › Research

    4. Published

      Advancing Kidney, Kidney Tumor, Cyst Segmentation: A Multi-Planner U-Net Approach for the KiTS23 Challenge

      Pandey, Sumit, Toshali, Perslev, Mathias & Dam, Erik Bjørnager, 2024, Kidney and Kidney Tumor Segmentation - MICCAI 2023 Challenge, KiTS 2023, Held in Conjunction with MICCAI 2023, Proceedings. Heller, N., Wood, A., Weight, C., Isensee, F., Rädsch, T., Teipaul, R. & Papanikolopoulos, N. (eds.). Springer, p. 143-148 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), Vol. 14540 LNCS).

      Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

    5. Published

      CHILI: Chemically-Informed Large-scale Inorganic Nanomaterials Dataset for Advancing Graph Machine Learning

      Friis-Jensen, Ulrik, Johansen, Frederik Lizak, Anker, Andy Sode, Dam, Erik Bjørnager, Jensen, K. M. Ø. & Selvan, Raghav, 2024, arxiv.org, 16 p.

      Research output: Working paper › Preprint › Research

    6. Published

      Operating Critical Machine Learning Models in Resource Constrained Regimes

      Selvan, Raghav, Schön, Julian Elisha & Dam, Erik Bjørnager, 2024, Medical Image Computing and Computer Assisted Intervention – MICCAI 2023 Workshops: MTSAIL 2023, LEAF 2023, AI4Treat 2023, MMMI 2023, REMIA 2023, Held in Conjunction with MICCAI 2023, Vancouver, BC, Canada, October 8–12, 2023, Proceedings. Springer, p. 325-335 Chapter 29. (Lecture Notes in Computer Science, Vol. 14394).

      Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

    7. 2023
    8. Published

      Comprehensive Multimodal Segmentation in Medical Imaging: Combining YOLOv8 with SAM and HQ-SAM Models

      Pandey, Sumit, Chen, K. F. & Dam, Erik Bjørnager, 2023, Proceedings - 2023 IEEE/CVF International Conference on Computer Vision Workshops, ICCVW 2023. IEEE, p. 2584-2590

      Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

    9. Published

      Multi‐planar 3D knee MRI segmentation via UNet inspired architectures

      Sengar, Sandeep Singh, Meulengracht, C., Boesen, Mikael Ploug, Overgaard, A. F., Gudbergsen, Henrik Rindel, Nybing, J. D., Perslev, Mathias & Dam, Erik Bjørnager, 2023, In: International Journal of Imaging Systems and Technology. 33, 3, p. 985-998

      Research output: Contribution to journal › Journal article › Research › peer-review

    10. Published

      Non-invasive phenotyping for water and nitrogen uptake by deep roots explored using machine learning

      Changdar, Satyasaran, Popovic, Olga, Wacker, Tomke Susanne, Markussen, Bo, Dam, Erik Bjørnager & Thorup-Kristensen, Kristian, 2023, In: Plant and Soil. 493, p. 603–616

      Research output: Contribution to journal › Journal article › Research › peer-review

    11. Published

      The KNee OsteoArthritis Prediction (KNOAP2020) challenge: An image analysis challenge to predict incident symptomatic radiographic knee osteoarthritis from MRI and X-ray images

      Hirvasniemi, J., Runhaar, J., van der Heijden, R. A., Zokaeinikoo, M., Yang, M., Li, X., Tan, J., Rajamohan, H. R., Zhou, Y., Deniz, C. M., Caliva, F., Iriondo, C., Lee, J. J., Liu, F., Martinez, A. M., Namiri, N., Pedoia, V., Panfilov, E., Bayramoglu, N., Nguyen, H. H. & 12 others, Nieminen, M. T., Saarakkala, S., Tiulpin, A., Lin, E., Li, A., Li, V., Dam, Erik Bjørnager, Chaudhari, A. S., Kijowski, R., Bierma-Zeinstra, S., Oei, E. H. G. & Klein, S., 2023, In: Osteoarthritis and Cartilage. 31, p. 115-125

      Research output: Contribution to journal › Journal article › Research › peer-review

    12. Published

      The Liver Tumor Segmentation Benchmark (LiTS)

      Bilic, P., Christ, P., Li, H. B., Vorontsov, E., Ben-Cohen, A., Kaissis, G., Szeskin, A., Jacobs, C., Mamani, G. E. H., Chartrand, G., Lohöfer, F., Holch, J. W., Sommer, W., Hofmann, F., Hostettler, A., Lev-Cohain, N., Drozdzal, M., Amitai, M. M., Vivanti, R., Sosna, J. & 89 others, Ezhov, I., Sekuboyina, A., Navarro, F., Kofler, F., Paetzold, J. C., Shit, S., Hu, X., Lipková, J., Rempfler, M., Piraud, M., Kirschke, J., Wiestler, B., Zhang, Z., Hülsemeyer, C., Beetz, M., Ettlinger, F., Antonelli, M., Bae, W., Bellver, M., Bi, L., Chen, H., Chlebus, G., Dam, Erik Bjørnager, Dou, Q., Fu, C., Georgescu, B., Giró-I-Nieto, X., Gruen, F., Han, X., Heng, P., Hesser, J., Moltz, J. H., Igel, Christian, Isensee, F., Jäger, P., Jia, F., Kaluva, K. C., Khened, M., Kim, I., Kim, J., Kim, S., Kohl, S., Konopczynski, T., Kori, A., Krishnamurthi, G., Li, F., Li, H., Li, J., Li, X., Lowengrub, J., Ma, J., Maier-Hein, K., Maninis, K., Meine, H., Merhof, D., Pai, A., Perslev, Mathias, Petersen, J., Pont-Tuset, J., Qi, J., Qi, X., Rippel, O., Roth, K., Sarasua, I., Schenk, A., Shen, Z., Torres, J., Wachinger, C., Wang, C., Weninger, L., Wu, J., Xu, D., Yang, X., Yu, S. C., Yuan, Y., Yue, M., Zhang, L., Cardoso, J., Bakas, S., Braren, R., Heinemann, V., Pal, C., Tang, A., Kadoury, S., Soler, L., van Ginneken, B., Greenspan, H., Joskowicz, L. & Menze, B., 2023, In: Medical Image Analysis. 84, 24 p., 102680.

      Research output: Contribution to journal › Journal article › Research › peer-review

    13. Published

      Towards Automatic Cartilage Quantification in Clinical Trials – Continuing from the 2019 IWOAI Knee Segmentation Challenge

      Dam, E. B., Desai, A. D., Deniz, C. M., Rajamohan, H. R., Regatte, R., Iriondo, C., Pedoia, V., Majumdar, S., Perslev, M., Igel, C., Pai, A., Gaj, S., Yang, M., Nakamura, K., Li, X., Maqbool, H., Irmakci, I., Song, S-E., Bagci, U., Hargreaves, B. & 2 others, Gold, G. & Chaudhari, A., 2023, In: Osteoarthritis Imaging. 3, 1, 9 p., 100087.

      Research output: Contribution to journal › Journal article › Research › peer-review

    14. 2022
    15. Published

      Carbon Footprint of Selecting and Training Deep Learning Models for Medical Image Analysis

      Selvan, Raghav, Bhagwat, N., Anthony, L. F. W., Kanding, B. & Dam, Erik Bjørnager, 2022, Medical Image Computing and Computer Assisted Intervention – MICCAI 2022: 25th International Conference Singapore, September 18–22, 2022 Proceedings, Part V. Springer, p. 506–516 (Lecture Notes in Computer Science, Vol. 13435).

      Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

    16. Published

      Conventional MRI-derived subchondral trabecular biomarkers and their association with knee cartilage volume loss as early as 1 year: a longitudinal analysis from Osteoarthritis Initiative

      Pishgar, F., Ashraf-Ganjouei, A., Dolatshahi, M., Guermazi, A., Zikria, B., Cao, X., Wan, M., Roemer, F. W., Dam, Erik Bjørnager & Demehri, S., 2022, In: Skeletal Radiology. 51, p. 1959–1966

      Research output: Contribution to journal › Journal article › Research › peer-review

    17. Published

      Cross‐Cohort Automatic Knee MRI Segmentation With Multi‐Planar U‐Nets

      Perslev, Mathias, Pai, A., Runhaar, J., Igel, Christian & Dam, Erik Bjørnager, 2022, In: Journal of Magnetic Resonance Imaging. 55, 2, p. 1650-1663

      Research output: Contribution to journal › Journal article › Research › peer-review

    18. Published

      Multivariable modeling of biomarker data from the phase 1 Foundation for the NIH Osteoarthritis Biomarkers Consortium

      Hunter, D. J., Deveza, L. A., Collins, J. E., Losina, E., Nevitt, M. C., Roemer, F. W., Guermazi, A., Bowes, M. A., Dam, Erik Bjørnager, Eckstein, F., Lynch, J. A., Katz, J. N., Kwoh, C. K., Hoffmann, S. & Kraus, V. B., 2022, In: Arthritis Care & Research. 74, 7, p. 1142-1153

      Research output: Contribution to journal › Journal article › Research › peer-review

    19. Published

      Patch-based Medical Image Segmentation using Matrix Product State Tensor Networks

      Selvan, Raghav, Dam, Erik Bjørnager, Flensborg, S. A. & Petersen, Jens, 2022, In: The Journal of Machine Learning for Biomedical Imaging. 2022, p. 1-24 005.

      Research output: Contribution to journal › Journal article › Research › peer-review

    20. 2021
    21. Published

      Fully automated quality control of rigid and affine registrations of T1w and T2w MRI in big data using machine learning

      Tummala, S., Thadikemalla, V. S. G., Kreilkamp, B. A. K., Dam, Erik Bjørnager & Focke, N. K., 2021, In: Computers in Biology and Medicine. 139, 104997.

      Research output: Contribution to journal › Journal article › Research › peer-review

    22. Published

      Locally orderless tensor networks for classifying two- and three-dimensional medical images

      Selvan, Raghav, Ørting, S. & Dam, Erik Bjørnager, 2021, In: The Journal of Machine Learning for Biomedical Imaging. 5, SI, p. 1-21

      Research output: Contribution to journal › Conference article › Research › peer-review

    23. Published

      Reply to Roemer and Guermazi: Early biochemical changes on MRI can predict risk of symptomatic progression

      Kundu, S., Ashinsky, B. G., Bouhrara, M., Dam, Erik Bjørnager, Demehri, S., Shifat-E-Rabbi, M., Spencer, R. G., Urish, K. L. & Rohde, G. K., 2021, In: Proceedings of the National Academy of Sciences of the United States of America. 118, 11, 2 p., e2024679118.

      Research output: Contribution to journal › Letter › Research › peer-review

    24. Published

      Segmenting Two-Dimensional Structures with Strided Tensor Networks

      Selvan, Raghav, Dam, Erik Bjørnager & Petersen, Jens, 2021, Information Processing in Medical Imaging - 27th International Conference, IPMI 2021, Proceedings. Feragen, A., Sommer, S., Schnabel, J. & Nielsen, M. (eds.). Springer, p. 401-414 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), Vol. 12729 LNCS).

      Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

    25. Published

      The International Workshop on Osteoarthritis Imaging Knee MRI Segmentation Challenge: A Multi-Institute Evaluation and Analysis Framework on a Standardized Dataset

      IWOAI Segmentation Challenge Writing Group, I. S. C. W. G., 2021, In: Radiology. Artificial intelligence. 3, 3, 13 p., e200078.

      Research output: Contribution to journal › Journal article › Research › peer-review

    26. 2020
    27. Published

      Characterising the Atomic Structure of Mono-Metallic Nanoparticles from X-Ray Scattering Data Using Conditional Generative Models

      Anker, Andy Sode, Kjær, E. T. S., Dam, Erik Bjørnager, Billinge, S. J. L., Jensen, K. M. Ø. & Selvan, Raghav, 17 Jul 2020

      Research output: Other contribution › Research

    28. Published

      Lung Segmentation from Chest X-rays using Variational Data Imputation

      Selvan, Raghav, Dam, Erik Bjørnager, Rischel, S., Sheng, K., Nielsen, Mads & Pai, A., 20 May 2020, In: OpenReview.net. 7 p.

      Research output: Contribution to journal › Conference article › Research

    29. Published

      Tensor Networks for Medical Image Classification

      Selvan, Raghav & Dam, Erik Bjørnager, 21 Apr 2020, International Conference on Medical Imaging with Deep Learning, MIDL 2020, 6-8 July 2020, Montréal, QC, Canada. PMLR, p. 721-732 (Proceedings of Machine Learning Research, Vol. 121).

      Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

    30. Published

      A Multi-Institute Evaluation and Analysis Framework on a Standardized Dataset: Findings From The International Workshop on Osteoarthritis Imaging Knee MRI Segmentation Challenge

      Desai, A. D., Caliva, F., Iriondo, C., Khosravan, N., Mortazi, A., Jambawalikar, S., Torigian, D., Ellerman, J., Akcakaya, M., Bagci, U., Tibrewala, R., Flament, I., O`Brien, M., Majumdar, S., Perslev, M., Pai, A., Igel, C., Dam, E. B., Gaj, S., Yang, M. & 9 others, Nakamura, K., Li, X., Deniz, C. M., Juras, V., Regatte, R., Gold, G. E., Hargreaves, B. A., Pedoia, V. & Chaudhari, A. S., 2020, In: Osteoarthritis and Cartilage Open. 28, Suppl. 1, p. 5304-5305

      Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

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