Jon Sporring

Jon Sporring

Professor

ORCID: 0000-0003-1261-6702

Publication year:
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1 - 100 out of 182Page size: 100
  1. 2024
  2. Published

    A semi-automatic method for extracting mitochondrial cristae characteristics from 3D focused ion beam scanning electron microscopy data

    Wang, Chenhao, Østergaard, L., Hasselholt, S. & Sporring, Jon, 2024, In: Communications Biology . 7, 1, 377.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. E-pub ahead of print

    Young glial progenitor cells competitively replace aged and diseased human glia in the adult chimeric mouse brain

    Vieira, R., Mariani, J. N., Huynh, N. P. T., Stephensen, Hans Jacob Teglbjærg, Solly, R., Tate, A., Schanz, S., Cotrupi, N., Mousaei, M., Sporring, Jon, Benraiss, A. & Goldman, Steven Alan, 2024, (E-pub ahead of print) In: Nature Biotechnology.

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. 2023
  5. Published

    Parametric Volumetric Registration

    Yushkevich, P. A., Zhang, M. & Sporring, Jon, 29 Sep 2023, Medical Image Analysis. Frangi, A., Prince, J. & Sonka, M. (eds.). Academic Press, p. 331-354 24 p.

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  6. Published

    A Practical Approach to Estimating the Effect of Synchrotron Radiation on Sperm Motility and Viability

    Lindhøj, M. B., Bonnin, A., Almstrup, K., Dyrby, T., Mokso, R. & Sporring, Jon, 2023, bioRxiv, 18 p.

    Research output: Working paper › Preprint › Research

  7. Published

    Astrocytic engagement of the corticostriatal synaptic cleft is disrupted in a mouse model of Huntington’s disease

    Villanueva, C. B., Stephensen, Hans Jacob Teglbjærg, Mokso, R., Benraiss, A., Sporring, Jon & Goldman, Steven Alan, 2023, In: Proceedings of the National Academy of Sciences USA (PNAS). 120, 24, 11 p., e2210719120.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    Morphology on Categorical Distributions

    Ørting, S. N., Stephensen, Hans Jacob Teglbjærg & Sporring, Jon, 2023, In: Journal of Mathematical Imaging and Vision. 65, p. 861–873

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    Multi-scale and Multi-resolution

    Sporring, Jon, 2023, Medical Image Analysis. Frangi, A., Prince, J. & Sonka, M. (eds.). Elsevier, 33 p.

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  10. Published

    Multiscale and multiresolution analysis

    Sporring, Jon, 2023, Medical Image Analysis. Academic Press, p. 177-197

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  11. 2022
  12. Published

    Extracting Mitochondrial Cristae Characteristics from 3D Focused Ion Beam Scanning Electron Microscopy Data

    Wang, Chenhao, Østergård, L., Hasselholt, S. & Sporring, Jon, 9 Nov 2022, bioRxiv. 20 p.

    Research output: Book/Report › Report › Research

  13. Published

    Reconstructing Binary Signals from Local Histograms

    Sporring, Jon & Darkner, Sune, 21 Mar 2022, In: Entropy. 24, 3, p. 1-11 433.

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Published

    An algebra for local histograms

    Sporring, Jon & Darkner, Sune, 2022, In: Frontiers in Computer Science. 4, p. 1-9 939563.

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Published

    Layer III pyramidal cells in the prefrontal cortex reveal morphological changes in subjects with depression, schizophrenia, and suicide

    Larsen, N. Y., Vihrs, N., Møller, J., Sporring, Jon, Tan, X., Li, X., Ji, G., Rajkowska, G., Sun, F. & Nyengaard, J. R., 2022, In: Translational Psychiatry. 12, 1, p. 363 1 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. 2021
  17. Published

    Cellular 3D-reconstruction and analysis in the human cerebral cortex using automatic serial sections

    Larsen, N. Y., Li, X., Tan, X., Ji, G., Lin, J., Rajkowska, G., Møller, J., Vihrs, N., Sporring, Jon, Sun, F. & Nyengaard, J. R., Dec 2021, In: Communications Biology . 4, 1, 15 p., 1030.

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    Currents and K-functions for Fiber Point Processes

    Hansen, P. E. H., Waagepetersen, R. P., Svane, A. M., Sporring, Jon, Stephensen, Hans Jacob Teglbjærg, Hasselholt, S. & Sommer, Stefan Horst, 2021, arXiv preprint. 12 p.

    Research output: Book/Report › Report › Research

  19. Published

    Currents and K-functions for Fiber Point Processes

    Hansen, P. E. H., Waagepetersen, R. P., Svane, A. M., Sporring, Jon, Stephensen, Hans Jacob Teglbjærg, Hasselholt, S. & Sommer, Stefan Horst, 2021, Geometric Science of Information: 5th International Conference, GSI 2021, Paris, France, July 21–23, 2021, Proceedings. Nielsen, F. & Barbaresco, F. (eds.). Springer, p. 127-134 (Lecture Notes in Computer Science, Vol. 12829).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  20. Published

    How Few Annotations are Needed for Segmentation Using a Multi-planar U-Net?

    Laprade, W. M., Perslev, Mathias & Sporring, Jon, 2021, Deep Generative Models, and Data Augmentation, Labelling, and Imperfections - First Workshop, DGM4MICCAI 2021, and First Workshop, DALI 2021, Held in Conjunction with MICCAI 2021, Proceedings. Engelhardt, S., Oksuz, I., Zhu, D., Yuan, Y., Mukhopadhyay, A., Heller, N., Huang, S. X., Nguyen, H., Sznitman, R. & Xue, Y. (eds.). Springer, p. 209-216 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), Vol. 13003 LNCS).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  21. Published

    Measuring Shape Relations Using r-Parallel Sets

    Stephensen, Hans Jacob Teglbjærg, Svane, A. M., Villanueva, C. B., Goldman, Steven Alan & Sporring, Jon, 2021, In: Journal of Mathematical Imaging and Vision. 63, p. 1069–1083 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. 2020
  23. Published

    Morphology on categorical distributions

    Ørting, S. N., Stephensen, Hans Jacob Teglbjærg & Sporring, Jon, 14 Dec 2020, arXiv.org.

    Research output: Book/Report › Report › Research

  24. Published

    A Highly Accurate Model Based Registration Method for FIB-SEM Images of Neurons

    Stephensen, Hans Jacob Teglbjærg, Darkner, Sune & Sporring, Jon, 2020, 8 p. (arXiv.org).

    Research output: Book/Report › Report › Research

  25. Published

    A Novel Approach to Tongue Standardization and Feature Extraction

    Wang, Chenhao, Cattaneo, C., Liu, J., Bredie, Wender, Pagliarini, E. & Sporring, Jon, 2020, Medical Image Computing and Computer Assisted Intervention – MICCAI 2020: 23rd International Conference, Proceedings. Martel, A. L., Abolmaesumi, P., Stoyanov, D., Mateus, D., Zuluaga, M. A., Zhou, S. K., Racoceanu, D. & Joskowicz, L. (eds.). Springer, p. 36-45 (Lecture Notes in Computer Science, Vol. 12265 LNCS).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  26. Published

    Comparison of manual and machine learning image processing approaches to determine fungiform papillae on the tongue

    Cattaneo, C., Liu, J., Wang, Chenhao, Pagliarini, E., Sporring, Jon & Bredie, Wender, 2020, bioRxiv, 18 p.

    Research output: Working paper › Preprint › Research

  27. Published

    Comparison of manual and machine learning image processing approaches to determine fungiform papillae on the tongue

    Cattaneo, C., Liu, J., Wang, Chenhao, Pagliarini, E., Sporring, Jon & Bredie, Wender, 2020, In: Scientific Reports. 10, 15 p., 18694.

    Research output: Contribution to journal › Journal article › Research › peer-review

  28. Published

    Restoring drifted electron microscope volumes using synaptic vesicles at sub-pixel accuracy

    Stephensen, Hans Jacob Teglbjærg, Darkner, Sune & Sporring, Jon, 2020, In: Communications Biology. 3, 1, 7 p., ´81.

    Research output: Contribution to journal › Journal article › Research › peer-review

  29. 2019
  30. Published

    Drift Corrector Software

    Stephensen, Hans Jacob Teglbjærg, Darkner, Sune & Sporring, Jon, 20 Aug 2019

    Research output: Non-textual form › Computer programme › Research

  31. Published

    Using a high-level parallel programming language for GPU-accelerated tomographic reconstruction

    Lindhøj, M. B., Henriksen, Troels, Pedersen, L. & Sporring, Jon, 15 Jul 2019, The 2019 International Conference on High Performance Computing & Simulation: HPCS 2019. IEEE, p. 27-32 6 p. 3

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  32. Published

    Generalizations of Ripley’s K-function with Application to Space Curves

    Sporring, Jon, Waagepetersen, R. P. & Sommer, Stefan Horst, Jun 2019, Information Processing in Medical Imaging - 26th International Conference, IPMI 2019, Hong Kong, China, 2019, Proceedings: 26th International Conference, IPMI 2019, Hong Kong, China, June 2–7, 2019, Proceedings. Springer, p. 731-742 (Lecture Notes in Computer Science, Vol. 11492).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  33. Published

    Experimental cerebral malaria is associated with profound loss of both glycan and protein components of the endothelial glycocalyx

    Hempel, C., Sporring, Jon & Kurtzhals, Jørgen, 2019, In: F A S E B Journal. 33, 2, p. 2058-2071

    Research output: Contribution to journal › Journal article › Research › peer-review

  34. Published

    Muscle fibre morphology and microarchitecture in cerebral palsy patients obtained by 3D synchrotron X-ray computed tomography

    Borg, L., Sporring, Jon, Dam, Erik Bjørnager, Dahl, V. A., Dyrby, T. B., Feidenhans'l, Robert Krarup, Dahl, A. B. & Pingel, Jessica, 2019, In: Computers in Biology and Medicine. 107, p. 265-269 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  35. 2018
  36. Published

    Collocation for diffeomorphic deformations in medical image registration

    Darkner, Sune, Pai, A. S. U., Liptrot, M. G. & Sporring, Jon, 2018, In: I E E E Transactions on Pattern Analysis and Machine Intelligence. 40, 7, p. 1570-1583

    Research output: Contribution to journal › Journal article › Research › peer-review

  37. Published

    Estimating the continuous entropy of a discrete set of orientations in R3

    Sporring, Jon, 2018, Copenhagen: Department of Computer Science, University of Copenhagen. 6 p. (Technical Report; No. 1, Vol. 2018).

    Research output: Book/Report › Report › Research

  38. 2017
  39. Published

    Reduction of variable-truncation artifacts from beam occlusion during in situ x-ray tomography

    Borg, L., Jørgensen, J. S., Frikel, J. & Sporring, Jon, Dec 2017, In: Measurement Science and Technology. 28, 12, 19 p., 124004.

    Research output: Contribution to journal › Journal article › Research › peer-review

  40. Published

    Synchrotron radiation μCT and histology evaluation of bone-to-implant contact

    Neldam, C. A., Sporring, Jon, Rack, A., Lauridsen, T., Hauge, E. M., Jørgensen, H. L., Jørgensen, Niklas Rye, Feidenhans'l, Robert Krarup & Pinholt, E. M., Sep 2017, In: Journal of Cranio-Maxillofacial Surgery. 45, 9, p. 1448-1457 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  41. Published

    Towards characterizing and reducing artifacts caused by varying projection truncation

    Borg, L., Jørgensen, J. S. & Sporring, Jon, 24 Feb 2017, Department of Computer Science, University of Copenhagen. 42 p. (Datalogisk Institut. Københavns Universitet. Technical Reports; No. 1, Vol. 2017).

    Research output: Book/Report › Report › Research

  42. Published

    3D analysis of synaptic vesicle density and distribution after acute foot-shock stress by using serial section transmission electron microscopy

    Khanmohammadi, M., Darkner, Sune, Nava, N., Nyengaard, J. R., Wegener, G., Popoli, M. & Sporring, Jon, 2017, In: Journal of Microscopy. 265, 1, p. 101–110 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  43. Published

    3D estimation of synaptic vesicle distributions in serial section transmission electron microscopy

    Khanmohammadi, M., Darkner, Sune, Nava, N., Nyengaard, J. R., Wegener, G., Popoli, M. & Sporring, Jon, 2017, In: Journal of Microscopy. 265, 1, p. 101–110 1 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  44. Published

    Estimation of sample spacing in stochastic processes

    Rønn-Nielsen, A., Sporring, Jon & Jensen, E. B. V., 2017, In: Image Analysis and Stereology. 36, 1, p. 43-49 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  45. Published

    Reducing artifacts from varying projection truncations

    Borg, L., Jørgensen, J. S., Frikel, J., Quinto, E. T. & Sporring, Jon, 2017. 2 p.

    Research output: Contribution to conference › Paper › Research › peer-review

  46. 2016
  47. Published

    Combining the boundary shift integral and tensor-based morphometry for brain atrophy estimation

    Michalkiewicz, M. D., Pai, A. S. U., Leung, K. K., Sommer, Stefan Horst, Darkner, Sune, Sørensen, L., Sporring, Jon & Nielsen, Mads, 2016, Medical imaging 2016: Image processing. Styner, M. A. & Angelini, E. D. (eds.). SPIE - International Society for Optical Engineering, 6 p. 978406. (Progress in Biomedical Optics and Imaging).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  48. Published

    Deformation-based atrophy computation by surface propagation and its application to Alzheimer’s disease

    Pai, A. S. U., Sporring, Jon, Darkner, Sune, Dam, Erik Bjørnager, Lillholm, Martin, Jørgensen, D., Oh, J., Chen, G., Suhy, J., Sørensen, L. & Nielsen, Mads, 2016, In: SPIE Journal of Medical Imaging. 3, 1, 11 p., 014005.

    Research output: Contribution to journal › Journal article › Research › peer-review

  49. Published

    Kernel bundle diffeomorphic image registration using stationary velocity fields and Wendland basis functions

    Pai, A. S. U., Sommer, Stefan Horst, Sørensen, L., Darkner, Sune, Sporring, Jon & Nielsen, Mads, 2016, In: IEEE Transactions on Medical Imaging. 35, 6, p. 1369-1380 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  50. Published

    Recovery of missing information in diffusion magnetic resonance imaging data

    Siddiqi, K., Piuze-Phaneuf, E. & Sporring, Jon, 2016, Patent No. US 2016/0335786 A1, 17 Nov 2016

    Research output: Patent

  51. 2015
  52. Published

    Adaptive time-stepping in dieomorphic image registration with bounded inverse consistency error

    Pai, A. S. U., Klein, S., Sommer, Stefan Horst, Sørensen, L., Darkner, Sune, Sporring, Jon & Nielsen, Mads, 2015, Proceedings of the fifth international workshop on Mathematical Foundations of Computational Anatomy (MFCA 2015) . INRIA, p. 35-47

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  53. Published

    Adaptive time-stepping in diffeomorphic image registration with bounded inverse consistency error

    Pai, A. S. U., Klein, S., Sommer, Stefan Horst, Sørensen, L. E. B. L., Darkner, Sune, Sporring, Jon & Nielsen, Mads, 2015, The 18th International Conference on Medical Image Computing and Computer Assisted Intervention: proceedings. Technische Universität München , p. 35-47 13 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  54. Published

    Analysis of shape and spatial interaction of synaptic vesicles using data from focused ion beam scanning electron microscopy (FIB-SEM)

    Khanmohammadi, M., Waagepetersen, R. P. & Sporring, Jon, 2015, In: Frontiers in Neuroanatomy. 9, 11 p., 116.

    Research output: Contribution to journal › Journal article › Research › peer-review

  55. Published

    Comparison of several computational pipelines for atrophy computation in longitudinal Alzheimers studies

    Pai, A. S. U., Sommer, Stefan Horst, Darkner, Sune, Sørensen, L. E. B. L., Sporring, Jon & Nielsen, Mads, 2015. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

  56. Published

    Connection forms for beating the heart

    Mensch, A., Piuze, E., Lehnert, L., Backermans, A. J., Sporring, Jon, Strijkers, G. J. & Siddiqi, K., 2015, Statistical Atlases and Computational Models of the Heart - Imaging and Modelling Challenges: 5th International Workshop, STACOM 2014, Held in Conjunction with MICCAI 2014, Boston, MA, USA, September 18, 2014, Revised Selected Papers. Camara, O., Mansi, T., Pop, M., Rhode, K., Sermesant, M. & Young, A. (eds.). Springer, p. 83-92 10 p. (Lecture notes in computer science, Vol. 8896).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  57. Published

    Diffeomorphic image registration with automatic time-step adjustment

    Pai, A. S. U., Klein, S., Sommer, Stefan Horst, Darkner, Sune, Sporring, Jon & Nielsen, Mads, 2015, 2015 IEEE 12th International Symposium on Biomedical Imaging (ISBI). IEEE, p. 1085-1088 4 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  58. Published

    Image registration using stationary velocity fields parameterized by norm-minimizing Wendland kernel

    Pai, A. S. U., Sommer, Stefan Horst, Sørensen, L., Darkner, Sune, Sporring, Jon & Nielsen, Mads, 2015, Medical Imaging 2015: Image Processing. SPIE - International Society for Optical Engineering, 7 p. (Proceedings of S P I E - International Society for Optical Engineering, Vol. 9413).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  59. Published

    Matematik på hjertet: bedre diagnosticering af hjertesygdomme

    Sporring, Jon, 2015, Naturen i computeren. Det Natur- og Biovidenskabelige Fakultet, Københavns Universitet, p. 12-13 2 p. (Temahæfte, Vol. 2015).

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Education

  60. Published

    Maurer-cartan forms for fields on surfaces: application to heart fiber geometry

    Piuze, E., Sporring, Jon & Siddiqi, K., 2015, In: IEEE Transactions on Pattern Analysis and Machine Intelligence. 37, 12, p. 2492-2504 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  61. Published

    Method of modelling and characterising heart fiber geometry, involves determining whether new fitting energy meets predetermined threshold when predetermined threshold is met iterative process is terminated

    Siddiqi, K., Piuze-Phaneuf, E., Sporring, Jon, Savadjiev, P., Strijkers, G. & Zucker, S., 2015, IPC No. G06T-011/00, Patent No. US2015332483-A1, 19 Nov 2015, Priority date 15 May 2014, Priority No. US993600P

    Research output: Patent

  62. Published

    Moving frames for heart fiber reconstruction

    Piuze, E., Sporring, Jon & Siddiqi, K., 2015, Information Processing in Medical Imaging: 24th international conference, IPMI 2015, Sabhal Mor Ostaig, Isle of Skye, UK, June 28 - July 3, 2015, Proceedings. Ourselin, S., Alexander, D. C., Westin, C-F. & Cardoso, M. J. (eds.). Springer, p. 527-539 13 p. (Lecture notes in computer science, Vol. 9123).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  63. Published

    Novel approach to measure the size of plasma-membrane nanodomains in single molecule localization microscopy

    Ziomkiewicz, I., Sporring, Jon, Pomorski, Thomas Guenther & Schulz, Alexander, 2015, In: Cytometry. Part A. 87, 9, p. 868-877

    Research output: Contribution to journal › Journal article › Research › peer-review

  64. 2014
  65. Published

    Analysing the distribution of synaptic vesicles using a spatial point process model

    Khanmohammadi, M., Waagepetersen, R., Nava, N., Nyengaard, J. & Sporring, Jon, 2014, Proceedings of the 5th ACM Conference on Bioinformatics, Computational Biology, and Health Informatics. Association for Computing Machinery, p. 73-78 6 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  66. Published

    Estimating the thickness of ultra thin sections for electron microscopy by image statistics

    Sporring, Jon, Khanmohammadi, M., Darkner, Sune, Nava, N., Nyengaard, J. R. & Jensen, E. B. V., 2014, 2014 IEEE International Symposium on Biomedical Imaging. IEEE, p. 157-160 4 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  67. Published

    Photon differential splatting for rendering caustics

    Frisvad, J. R., Schjøth, L., Erleben, Kenny & Sporring, Jon, 2014, In: Computer Graphics Forum. 33, 6, p. 252-263 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  68. Published

    Stepwise inverse consistent Euler’s scheme for diffeomorphic image registration

    Pai, A. S. U., Sommer, Stefan Horst, Darkner, Sune, Sørensen, L., Sporring, Jon & Nielsen, Mads, 2014, Biomedical Image Registration: 6th International Workshop, WBIR 2014, London, UK, July 7-8, 2014. Proceedings. Ourselin, S. & Modat, M. (eds.). Springer, p. 223-230 8 p. (Lecture notes in computer science, Vol. 8545).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  69. Published

    White matter hypointensity growth rate correlates with rate of brain atrophy

    Pai, A. S. U., Sørensen, L., Darkner, Sune, Sporring, Jon, Rostrup, E. & Nielsen, Mads, 2014, In: Alzheimer's & Dementia. 10, 4, Supplement, p. P75-P76 2 p., IC-P-131.

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  70. Published

    White matter hypointensity growth rate correlates with rate of brain atrophy

    Pai, A. S. U., Sørensen, L., Darkner, Sune, Sporring, Jon, Rostrup, E. & Nielsen, Mads, 2014, In: Alzheimer's & Dementia. 10, 4, Supplement, p. P414 1 p., P1-285.

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  71. 2013
  72. Published

    Atlases of cardiac fiber differential geometry

    Piuze, E., Lombaert, H., Sporring, Jon, Strijkers, G. J., Bakermans, A. J. & Siddiqi, K., 2013, Functional Imaging and Modeling of the Heart: 7th International Conference, FIMH 2013, London, UK, June 20-22, 2013. Proceedings. Ourselin, S., Rueckert, D. & Smith, N. (eds.). Springer, p. 442-449 8 p. (Lecture notes in computer science, Vol. 7945).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  73. Published

    Automatic measurement of wrist synovitis from contrast-enhanced MRI: a registration-centered approach

    Mysling, P., Darkner, Sune, Sporring, Jon, Dam, E. & Lillholm, Martin, 2013, Medical Imaging 2013: Image Processing. Ourselin, S. & Haynor, D. R. (eds.). SPIE - International Society for Optical Engineering, 6 p. 86692U. (Progress in Biomedical Optics and Imaging; No. 36, Vol. 14).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  74. Published

    Cardiac fiber inpainting using cartan forms

    Piuze, E., Lombaert, H., Sporring, Jon & Siddiqi, K., 2013, Medical Image Computing and Computer-Assisted Intervention – MICCAI 2013: 16th International Conference, Nagoya, Japan, September 22-26, 2013, Proceedings, Part II. Moru, K., Sakuma, I., Sato, Y., Barillot, C. & Navab, N. (eds.). Springer, p. 509-517 9 p. (Lecture notes in computer science, Vol. 8150).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  75. Published

    Cube propagation for focal brain atrophy estimation

    Pai, A. S. U., Sørensen, L., Darkner, Sune, Mysling, P., Jørgensen, D. R., Dam, E. B., Lillholm, Martin, Oh, J., Chen, G., Suhy, J., Sporring, Jon & Nielsen, Mads, 2013, 2013 IEEE 10th International Symposium on Biomedical Imaging. IEEE, p. 402-405 4 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  76. Published

    Diffeomorphic spectral matching of cortical surfaces

    Lombaert, H., Sporring, Jon & Siddiqi, K., 2013, Information Processing in Medical Imaging: 23rd International Conference, IPMI 2013, Asilomar, CA, USA, June 28–July 3, 2013. Proceedings. Gee, J. C., Joshi, S., Pohl, K. M., Wells, W. M. & Zöllei, L. (eds.). Springer, p. 376-389 14 p. (Lecture notes in computer science, Vol. 7917).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  77. Published

    Evaluation of WBAA with registration-based cube propagation for brain atrophy quantification

    Lillholm, Martin, Pai, A. S. U., Sørensen, L., Nielsen, Mads, Sporring, Jon, Darkner, Sune & Dam, E., 2013. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

  78. Published

    Hippocampus atrophy in early Alzheimer's disease quantified using non-rigid registration with cube propagation

    Pai, A. S. U., Sørensen, L. E. B. L., Mysling, P., Erleben, L. L., Sporring, Jon, Dam, E., Lillholm, M., Jørgensen, D. R., Chen, G., Oh, J., Suhy, J. & Nielsen, Mads, 2013.

    Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

  79. Published

    Localized cerebral atrophy acceleration during Alzheimer’s disease

    Pai, A. S. U., Sørensen, L., Darkner, Sune, Lillholm, Martin, Dam, E. B., Sporring, Jon & Nielsen, Mads, 2013, In: Alzheimer's & Dementia. 9, 4, Supplement, p. P36–P37 2 p., IC-P-059.

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  80. Published

    Localized cerebral atrophy acceleration during Alzheimer’s disease

    Pai, A. S. U., Sørensen, L., Darkner, Sune, Lillholm, Martin, Dam, E. B., Sporring, Jon & Nielsen, Mads, 2013, In: Alzheimer's & Dementia. 9, 4, Supplement, p. P151 1 p., O1-10-06.

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  81. Published

    Locally orderless registration

    Darkner, Sune & Sporring, Jon, 2013, In: I E E E Transactions on Pattern Analysis and Machine Intelligence. 35, 6, p. 1437-1450 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  82. Published

    Moving frames for heart fiber geometry

    Piuze, E., Sporring, Jon & Siddiqi, K., 2013, Information Processing in Medical Imaging: 23rd International Conference, IPMI 2013, Asilomar, CA, USA, Proceedings. Gee, J. C., Joshi, S., Pohl, K. M., Wells, W. M. & Zöllei, L. (eds.). Springer, p. 524-535 12 p. (Lecture notes in computer science, Vol. 7917).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  83. Published

    Truncation error for simplex propagation

    Sporring, Jon, 2013, Datalogisk Institut. 8 p. (Koebenhavns Universitet. Datalogisk Institut. Rapport; No. 01/2013).

    Research output: Book/Report › Report › Research

  84. 2012
  85. Published

    Evaluation of bias in brain atrophy estimation

    Pai, A. S. U., Darkner, Sune, Sørensen, L., Erleben, L. L., Mysling, P., Sporring, Jon, Dam, E. & Nielsen, Mads, 2012, NIBAD '12: MICCAI 2012 Workshop on Novel Imaging Biomarkers for Alzheimer’s Disease and Related Disorders. Wang, L., Yushkevich, P. & Ourselin, S. (eds.). MICCAI , p. 198-206 9 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  86. Published

    Locally Orderless Registration

    Darkner, Sune & Sporring, Jon, 2012, arxiv.org, 14 p.

    Research output: Working paper › Preprint › Research

  87. Published

    Locally orderless registration code: fast normalized mutual information and P-Norm for MATLAB

    Darkner, Sune & Sporring, Jon, 2012

    Research output: Non-textual form › Computer programme › Research

  88. Published

    Mass preserving image registration for lung CT

    Gorbunova, V., Sporring, Jon, Lo, P. C. P., Loeve, M., Tiddens, H. A., Nielsen, Mads, Dirksen, A. & de Bruijne, Marleen, 2012, In: Medical Image Analysis. 16, 4, p. 786-795 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  89. Published

    Maximum a posteriori covariance estimation using a power inverse wishart prior

    Nielsen, S. F. & Sporring, Jon, 2012, 29 p. (arXiv.org: Statistics).

    Research output: Book/Report › Report › Research

  90. 2011
  91. Published

    Evaluation of registration methods on thoracic CT: the EMPIRE10 challenge

    Murphy, K., van Ginneken, B., Reinhardt, J., Kabus, S., Ding, K., Deng, X., Cao, K., Du, K., Christensen, G., Garcia, V., Vercauteren, T., Ayache, N., Commowick, O., Malandain, G., Glocker, B., Paragios, N., Navab, N., Gorbunova, V., Sporring, J., de Bruijne, M. & 34 others, Han, X., Heinrich, M., Schnabel, J., Jenkinson, M., Lorenz, C., Modat, M., McClelland, J., Ourselin, S., Muenzing, S., Viergever, M., De Nigris, D., Collins, D., Arbel, T., Peroni, M., Li, R., Sharp, G., Schmidt-Richberg, A., Ehrhardt, J., Werner, R., Smeets, D., Loeckx, D., Song, G., Tustison, N., Avants, B., Gee, J., Staring, M., Klein, S., Stoel, B., Urschler, M., Werlberger, M., Vandemeulebroucke, J., Rit, S., Sarrut, D. & Pluim, J., 2011, In: IEEE Transactions on Medical Imaging. 30, 11, p. 1901-1920 20 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  92. Published

    Generalized Partial Volume: an inferior density estimator to Parzen Windows for normalized mutual information

    Darkner, Sune & Sporring, Jon, 2011, Information Processing in Medical Imaging: 22nd International Conference, IPMI 2011, Kloster Irsee, Germany, July 3-8, 2011. Proceedings. Székely, G. & Hahn, H. K. (eds.). Springer, p. 436-447 12 p. (Lecture notes in computer science, Vol. 6801).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  93. Published

    Jacobians for Lebesgue registration for a range of similarity measures

    Sporring, Jon & Darkner, Sune, 2011, Department of Computer Science, University of Copenhagen. 8 p. (Koebenhavns Universitet. Datalogisk Institut. Rapport; No. 04/2011).

    Research output: Book/Report › Report › Research

  94. Published

    Maximum a posteriori estimation of linear shape variation with application to vertebra and cartilage modeling

    Crimi, A., Lillholm, Martin, Nielsen, Mads, Ghosh, A., de Bruijne, Marleen, Dam, E. B. & Sporring, Jon, 2011, In: IEEE Transactions on Medical Imaging. 30, 8, p. 1514-1526 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  95. 2010
  96. Published

    Anisotropic diffusion tensor applied to temporal mammograms: an application to breast cancer risk assessment

    Karemore, G., Brandt, S., Sporring, Jon & Nielsen, Mads, 2010, 2010 Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC). IEEE, p. 3178-3181 4 p. (I E E E Engineering in Medicine and Biology Society. Conference Proceedings).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  97. Published

    Mass preserving image registration: results of Evaluation of Methods for Pulmonary Image Registration 2010 Challenge

    Gorbunova, V., Sporring, Jon, Lo, P. C. P., Dirksen, A. & de Bruijne, Marleen, 2010, Medical image analysis for the clinic: a grand challenge: workshop proceedings from the 13th International Conference on Medical Image Computing And Computer Assisted Intervention. van Ginneken, B., Murphy, K., Heimann, T., Pekar, V. & Deng, X. (eds.). CreateSpace Independent Publishing Platform , p. 155-164 10 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  98. Published

    Photon differentials in space and time

    Schjøth, L., Frisvad, J. R., Erleben, Kenny & Sporring, Jon, 2010, Computer Vision, Imaging and Computer Graphics. Theory and Applications: International Joint Conference, VISIGRAPP 2010, Angers, France, May 17-21, 2010. Revised Selected Papers. Richard, P. & Braz, J. (eds.). Springer, p. 274-286 13 p. (Communications in Computer and Information Science, Vol. 229).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  99. Published

    Vessel-guided airway tree segmentation: a voxel classification approach

    Lo, P. C. P., Sporring, Jon, Ashraf, H., Pedersen, J. J. H. & de Bruijne, Marleen, 2010, In: Medical Image Analysis. 14, 4, p. 527-538 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  100. 2009
  101. Published

    Bayes estimation of shape model with application to vertebrae boundaries

    Crimi, A., Ghosh, A., Sporring, Jon & Nielsen, Mads, 2009, Medical Imaging 2009: Image Processing (Proceedings Volume). Vol. 7259. 8 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  102. Published

    Airway Tree Extraction with Locally Optimal Paths

    Lo, P. C. P., Sporring, Jon, Pedersen, J. J. H. & de Bruijne, Marleen, 2009, MICCAI 2009. p. 51-58 8 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  103. Published

    Content-Aware Video Editing in the Temporal Domain

    Slot, K., Truelsen, R. & Sporring, Jon, 2009, Scandinavian Conference on Image Analysis (SCIA '09). 9 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  104. Published

    Learning COPD Sensitive Filters in Pulmonary CT

    Sørensen, L. E. B. L., Lo, P. C. P., Ashraf, H., Sporring, Jon, Nielsen, Mads & de Bruijne, Marleen, 2009, Medical Image Computing and Computer-Assisted Intervention - MICCAI 2009. 7 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  105. Published

    Mass Preserving Registration for lung CT

    Gorbunova, V., Lo, P. C. P., Loeve, M., Tiddens, H., Sporring, Jon, Nielsen, Mads & de Bruijne, Marleen, 2009, Proceedings of the SPIE: Medical Imaging 2009: Image Processing. Vol. 7259. 10 p. (Proceedings of the SPIE, Vol. 7259).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  106. Published

    Multiscale Vessel-guided Airway Tree Segmentation

    Lo, P. C. P., Sporring, Jon & de Bruijne, Marleen, 2009, Proceedings of Second International Workshop on Pulmonary Image Analysis. Brown, M., de Bruijne, M., van Ginneken, B., Kiraly, A., Kuhnigk, J-M., Lorenz, C., McClelland, J. R., Mori, K., Reeves, A. & Reinhardt, J. M. (eds.). CreateSpace, p. 323-332 10 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  107. Published

    Prior knowledge regularization in statistical medical image tasks

    Crimi, A., Sporring, Jon, de Bruijne, Marleen, Lillholm, Martin & Nielsen, Mads, 2009, Proceedings of the MICCAI Workshop on Probabilistic Models for Medical Image Analysis. 12 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  108. Published

    Spatial and Temporal Ray Differentials

    Sporring, Jon, Schjøth, L. & Erleben, Kenny, 2009, Department of Computer Science: Department of Computer Science, University of Copenhagen. 14 p. (Technical Report; No. 04, Vol. 2009).

    Research output: Book/Report › Report › Research

  109. 2008
  110. Published

    Bayes PCA Revisited

    Sporring, Jon, 2008, Department of Computer Science: Museum Tusculanum. 12 p. (Department of Computer Science. University of Copenhagen. Technical Report; No. 08-09).

    Research output: Book/Report › Report › Research

  111. Published

    Bayes reconstruction of missing teeth

    Sporring, Jon & Jensen, K. H., 2008, In: Journal of Mathematical Imaging and Vision. 13, 2-3, p. 245-254

    Research output: Contribution to journal › Journal article › Research › peer-review

  112. Published

    Diffusion Based Photon Mapping

    Schjøth, L., Sporring, Jon & Fogh Olsen, O., 2008, In: Computer Graphics Forum. 27, 8, p. 2114-2127 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  113. Published

    Guessing tangents in normal flows

    Markussen, Bo, Sporring, Jon & Erleben, Kenny, 2008, In: Journal of Mathematical Imaging and Vision. 31, 2-3, p. 195-205 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  114. Published

    Special Issue on Tribute Workshop for Peter Johansen

    Nielsen, Mads, de Bruijne, Marleen, Jørgensen, Camilla Holm, Olsen, Søren Ingvor, Steenstrup Pedersen, Kim & Sporring, Jon, 2008, In: Journal of Mathematical Imaging and Vision. 31, 2-3, p. 119-120

    Research output: Contribution to journal › Editorial › Research

  115. Published

    Tribute Workshop for Peter Johansen

    Nielsen, Mads (ed.), de Bruijne, Marleen (ed.), Jørgensen, Camilla Holm (ed.), Olsen, Søren Ingvor (ed.), Steenstrup Pedersen, Kim (ed.) & Sporring, Jon (ed.), 2008, Berlin: Springer. 151 p. (Journal of Mathematical Imaging and Vision; No. 31(2-3)p.119-269).

    Research output: Book/Report › Anthology › Research

  116. Published

    Vessel-guided airway segmentation based on voxel classification

    Lo, P. C. P., Sporring, Jon, Ashraf, H., Holst Pedersen, J. J. & de Bruijne, Marleen, 2008, The first International Workshop on Pulmonary Image Analysis: New York, September 6, 2008. Brown, M., de Bruijne, M., van Ginneken, B., Kiraly, A., Kuhnigk, J-M., Lorenz, C., Mori, K. & Reinhardt, J. (eds.). Lulu.com, p. 113-122

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  117. Published

    Voxel Classification Based Vessel-guided Airway Segmentation

    Lo, P. C. P., Sporring, Jon, Ashraf, H., Pedersen, J. H. J. & de Bruijne, Marleen, 2008, Proceedings of the Danish Conference on Pattern Recognition and Image Analysis: Organised by Danish Society for Automatic Pattern Recognition (Dansk Selskab for automatisk genkendelse af mønstre), Departmen of Computer Science, University of Copenhagen, Thursday 21 August 2008. Olsen, S. I. (ed.). Museum Tusculanum, p. 8-9 (Datalogisk Institut. Københavns Universitet. Technical Reports; No. 08-10).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research

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