A clinically motivated self-supervised approach for content-based image retrieval of CT liver images

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Standard

A clinically motivated self-supervised approach for content-based image retrieval of CT liver images. / Wickstrøm, Kristoffer Knutsen; Østmo, Eirik Agnalt; Radiya, Keyur; Mikalsen, Karl Øyvind; Kampffmeyer, Michael Christian; Jenssen, Robert.

I: Computerized Medical Imaging and Graphics, Bind 107, 102239, 2023.

Publikation: Bidrag til tidsskriftTidsskriftartikelForskningfagfællebedømt

Harvard

Wickstrøm, KK, Østmo, EA, Radiya, K, Mikalsen, KØ, Kampffmeyer, MC & Jenssen, R 2023, 'A clinically motivated self-supervised approach for content-based image retrieval of CT liver images', Computerized Medical Imaging and Graphics, bind 107, 102239. https://doi.org/10.1016/j.compmedimag.2023.102239

APA

Wickstrøm, K. K., Østmo, E. A., Radiya, K., Mikalsen, K. Ø., Kampffmeyer, M. C., & Jenssen, R. (2023). A clinically motivated self-supervised approach for content-based image retrieval of CT liver images. Computerized Medical Imaging and Graphics, 107, [102239]. https://doi.org/10.1016/j.compmedimag.2023.102239

Vancouver

Wickstrøm KK, Østmo EA, Radiya K, Mikalsen KØ, Kampffmeyer MC, Jenssen R. A clinically motivated self-supervised approach for content-based image retrieval of CT liver images. Computerized Medical Imaging and Graphics. 2023;107. 102239. https://doi.org/10.1016/j.compmedimag.2023.102239

Author

Wickstrøm, Kristoffer Knutsen ; Østmo, Eirik Agnalt ; Radiya, Keyur ; Mikalsen, Karl Øyvind ; Kampffmeyer, Michael Christian ; Jenssen, Robert. / A clinically motivated self-supervised approach for content-based image retrieval of CT liver images. I: Computerized Medical Imaging and Graphics. 2023 ; Bind 107.

Bibtex

@article{a932305bdcfb4e18a9befd248622d4d3,
title = "A clinically motivated self-supervised approach for content-based image retrieval of CT liver images",
abstract = "Deep learning-based approaches for content-based image retrieval (CBIR) of computed tomography (CT) liver images is an active field of research, but suffer from some critical limitations. First, they are heavily reliant on labeled data, which can be challenging and costly to acquire. Second, they lack transparency and explainability, which limits the trustworthiness of deep CBIR systems. We address these limitations by: (1) Proposing a self-supervised learning framework that incorporates domain-knowledge into the training procedure, and, (2) by providing the first representation learning explainability analysis in the context of CBIR of CT liver images. Results demonstrate improved performance compared to the standard self-supervised approach across several metrics, as well as improved generalization across datasets. Further, we conduct the first representation learning explainability analysis in the context of CBIR, which reveals new insights into the feature extraction process. Lastly, we perform a case study with cross-examination CBIR that demonstrates the usability of our proposed framework. We believe that our proposed framework could play a vital role in creating trustworthy deep CBIR systems that can successfully take advantage of unlabeled data.",
keywords = "Content-based image retrieval, CT liver imaging, Explainability, Self-supervised learning",
author = "Wickstr{\o}m, {Kristoffer Knutsen} and {\O}stmo, {Eirik Agnalt} and Keyur Radiya and Mikalsen, {Karl {\O}yvind} and Kampffmeyer, {Michael Christian} and Robert Jenssen",
note = "Publisher Copyright: {\textcopyright} 2023 The Author(s)",
year = "2023",
doi = "10.1016/j.compmedimag.2023.102239",
language = "English",
volume = "107",
journal = "Computerized Medical Imaging and Graphics",
issn = "0895-6111",
publisher = "Elsevier Limited",

}

RIS

TY - JOUR

T1 - A clinically motivated self-supervised approach for content-based image retrieval of CT liver images

AU - Wickstrøm, Kristoffer Knutsen

AU - Østmo, Eirik Agnalt

AU - Radiya, Keyur

AU - Mikalsen, Karl Øyvind

AU - Kampffmeyer, Michael Christian

AU - Jenssen, Robert

N1 - Publisher Copyright: © 2023 The Author(s)

PY - 2023

Y1 - 2023

N2 - Deep learning-based approaches for content-based image retrieval (CBIR) of computed tomography (CT) liver images is an active field of research, but suffer from some critical limitations. First, they are heavily reliant on labeled data, which can be challenging and costly to acquire. Second, they lack transparency and explainability, which limits the trustworthiness of deep CBIR systems. We address these limitations by: (1) Proposing a self-supervised learning framework that incorporates domain-knowledge into the training procedure, and, (2) by providing the first representation learning explainability analysis in the context of CBIR of CT liver images. Results demonstrate improved performance compared to the standard self-supervised approach across several metrics, as well as improved generalization across datasets. Further, we conduct the first representation learning explainability analysis in the context of CBIR, which reveals new insights into the feature extraction process. Lastly, we perform a case study with cross-examination CBIR that demonstrates the usability of our proposed framework. We believe that our proposed framework could play a vital role in creating trustworthy deep CBIR systems that can successfully take advantage of unlabeled data.

AB - Deep learning-based approaches for content-based image retrieval (CBIR) of computed tomography (CT) liver images is an active field of research, but suffer from some critical limitations. First, they are heavily reliant on labeled data, which can be challenging and costly to acquire. Second, they lack transparency and explainability, which limits the trustworthiness of deep CBIR systems. We address these limitations by: (1) Proposing a self-supervised learning framework that incorporates domain-knowledge into the training procedure, and, (2) by providing the first representation learning explainability analysis in the context of CBIR of CT liver images. Results demonstrate improved performance compared to the standard self-supervised approach across several metrics, as well as improved generalization across datasets. Further, we conduct the first representation learning explainability analysis in the context of CBIR, which reveals new insights into the feature extraction process. Lastly, we perform a case study with cross-examination CBIR that demonstrates the usability of our proposed framework. We believe that our proposed framework could play a vital role in creating trustworthy deep CBIR systems that can successfully take advantage of unlabeled data.

KW - Content-based image retrieval

KW - CT liver imaging

KW - Explainability

KW - Self-supervised learning

UR - http://www.scopus.com/inward/record.url?scp=85159367596&partnerID=8YFLogxK

U2 - 10.1016/j.compmedimag.2023.102239

DO - 10.1016/j.compmedimag.2023.102239

M3 - Journal article

C2 - 37207397

AN - SCOPUS:85159367596

VL - 107

JO - Computerized Medical Imaging and Graphics

JF - Computerized Medical Imaging and Graphics

SN - 0895-6111

M1 - 102239

ER -

ID: 347977905