Jens Petersen

Jens Petersen

Lektor

ORCID: 0000-0003-0138-0693

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  1. 2023
  2. Udgivet

    Graph cut-based segmentation

    Petersen, Jens, Oguz, I. & de Bruijne, Marleen, 2023, Medical Image Analysis. Academic Press, s. 247-273

    Publikation: Bidrag til bog/antologi/rapport › Bidrag til bog/antologi › Forskning › fagfællebedømt

  3. 2022
  4. Udgivet

    Interpreting Latent Spaces of Generative Models for Medical Images using Unsupervised Methods

    Schön, Julian Elisha, Selvan, Raghav & Petersen, Jens, 2022, Deep Generative Models: Second MICCAI Workshop, DGM4MICCAI 2022, Held in Conjunction with MICCAI 2022, Singapore, September 22, 2022, Proceedings. Springer, s. 24-33 (Lecture Notes in Computer Science, Bind 13609).

    Publikation: Bidrag til bog/antologi/rapport › Konferencebidrag i proceedings › Forskning › fagfællebedømt

  5. 2021
  6. Udgivet

    Segmenting Two-Dimensional Structures with Strided Tensor Networks

    Selvan, Raghav, Dam, Erik Bjørnager & Petersen, Jens, 2021, Information Processing in Medical Imaging - 27th International Conference, IPMI 2021, Proceedings. Feragen, A., Sommer, S., Schnabel, J. & Nielsen, M. (red.). Springer, s. 401-414 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), Bind 12729 LNCS).

    Publikation: Bidrag til bog/antologi/rapport › Konferencebidrag i proceedings › Forskning › fagfællebedømt

  7. 2019
  8. Udgivet

    A Cross-Center Smoothness Prior for Variational Bayesian Brain Tissue Segmentation

    Kouw, W. M., Ørting, S. N., Petersen, Jens, Steenstrup Pedersen, Kim & de Bruijne, Marleen, 1 jan. 2019, Information Processing in Medical Imaging : 26th International Conference, IPMI 2019, Proceedings. Bao, S., Chung, A. C. S., Gee, J. C. & Yushkevich, P. A. (red.). Springer, s. 360-371 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), Bind 11492 LNCS).

    Publikation: Bidrag til bog/antologi/rapport › Konferencebidrag i proceedings › Forskning › fagfællebedømt

  9. 2018
  10. Udgivet

    Detecting emphysema with multiple instance learning

    Orting, S. N., Petersen, Jens, Thomsen, L. H., Wille, M. M. W. & de Bruijne, Marleen, 23 maj 2018, 2018 IEEE 15th International Symposium on Biomedical Imaging, ISBI 2018. IEEE, s. 510-513

    Publikation: Bidrag til bog/antologi/rapport › Konferencebidrag i proceedings › Forskning › fagfællebedømt

  11. Udgivet

    Feature Learning Based on Visual Similarity Triplets in Medical Image Analysis: A Case Study of Emphysema in Chest CT Scans

    Nyboe Ørting, S., Petersen, Jens, Cheplygina, V., Thomsen, L. H., Wille, M. M. W. & de Bruijne, Marleen, 2018, Intravascular Imaging and Computer Assisted Stenting and Large-Scale Annotation of Biomedical Data and Expert Label Synthesis: 7th Joint International Workshop, CVII-STENT 2018 and Third International Workshop, LABELS 2018 Held in Conjunction with MICCAI 2018 Granada, Spain, September 16, 2018 Proceedings. Stoyanov, D., Taylor, Z., Balocco, S. & Sznitman, R. (red.). Springer, s. 140-149 Chapter 16. (Lecture Notes in Computer Science, Bind 11043).

    Publikation: Bidrag til bog/antologi/rapport › Konferencebidrag i proceedings › Forskning › fagfællebedømt

  12. Udgivet

    Mean Field Network Based Graph Refinement with Application to Airway Tree Extraction

    Selvan, Raghav, Welling, M., Pedersen, J. J. H., Petersen, Jens & de Bruijne, Marleen, 2018, Medical Image Computingand Computer AssistedIntervention – MICCAI 2018: 21st International Conference, Granada, Spain, September 16–20, 2018, Proceedings, Part II. Frangi, A. F., Schnabel, J. A., Davatzikos, C., Alberola-López, C. & Fichtinger, G. (red.). Springer, s. 750-758 (Lecture notes in computer science, Bind 11071).

    Publikation: Bidrag til bog/antologi/rapport › Konferencebidrag i proceedings › Forskning › fagfællebedømt

  13. 2017
  14. Udgivet

    Crowdsourced emphysema assessment

    Ørting, S. N., Cheplygina, V., Petersen, Jens, Thomsen, L. H., Wille, M. M. W. & de Bruijne, Marleen, 2017, Intravascular Imaging and Computer Assisted Stenting, and Large-Scale Annotation of Biomedical Data and Expert Label Synthesis: 6th Joint International Workshops, CVII-STENT 2017 and Second International Workshop, LABELS 2017, Held in Conjunction with MICCAI 2017, Québec City, QC, Canada, September 10–14, 2017, Proceedings. Cardoso, M. J., Arbel, T., Lee, S-L., Cheplygina, V., Balocco, S., Mateus, D., Zahnd, G., Maier-Hein, L., Dermirci, S., Granger, E., Duong, L., Carbonneau, M-A., Albarquoni, S. & Carneiro, G. (red.). Springer, s. 126-135 10 s. (Lecture notes in computer science, Bind 10552).

    Publikation: Bidrag til bog/antologi/rapport › Konferencebidrag i proceedings › Forskning › fagfællebedømt

  15. Udgivet

    Extraction of Airways with Probabilistic State-Space Models and Bayesian Smoothing

    Selvan, Raghav, Petersen, Jens, Pedersen, J. J. H. & de Bruijne, Marleen, 2017, Graphs in Biomedical Image Analysis, Computational Anatomy and Imaging Genetics: First International Workshop, GRAIL 2017, 6th International Workshop, MFCA 2017, and Third International Workshop, MICGen 2017, Held in Conjunction with MICCAI 2017, Québec City, QC, Canada, September 10–14, 2017, Proceedings. Cardoso, M. J., Arbel, T., Ferrante, E., Pennec, X., Dalca, A. V., Parisot, S., Joshi, S., Batmanghelich, N. K., Sotiras, A., Nielsen, M., Sabuncu, M. R., Fletcher, T., Shen, L., Durrleman, S. & Sommer, S. (red.). Springer, s. 53-63 (Lecture notes in computer science, Bind 10551).

    Publikation: Bidrag til bog/antologi/rapport › Konferencebidrag i proceedings › Forskning › fagfællebedømt

  16. 2016
  17. Udgivet

    Extraction of airway trees using multiple hypothesis tracking and template matching

    Selvan, Raghav, Petersen, Jens, Pedersen, J. J. H. & de Bruijne, Marleen, 2016, The Sixth International Workshop on Pulmonary Image Analysis: Athens, Greece - October 21, 2016. Beichel, R. R., Farahani, K., Jacobs, C., Kabus, S., Kiraly, A. P., Kuhnigk, J-M., McClelland, J. R., Mori, K., Petersen, J. & Rit, S. (red.). Create Space Independent Publishing Platform, s. 43-54 12 s.

    Publikation: Bidrag til bog/antologi/rapport › Konferencebidrag i proceedings › Forskning › fagfællebedømt

  18. Udgivet

    Quantifying emphysema extent from weakly labeled CT scans of the lungs using label proportions learning

    Ørting, S. N., Petersen, Jens, Wille, M., Thomsen, L. & de Bruijne, Marleen, 2016, The Sixth International Workshop on Pulmonary Image Analysis. Beichel, R. R., Farahani, K., Jacobs, C., Kabus, S., Kiraly, A. P., Kuhnigk, J-M., McClelland, J. R., Mori, K., Petersen, J. & S. R. (red.). CreateSpace Independent Publishing Platform , s. 31-42 11 s.

    Publikation: Bidrag til bog/antologi/rapport › Konferencebidrag i proceedings › Forskning › fagfællebedømt

  19. 2015
  20. Udgivet

    Quantification and visualization of variation in anatomical trees

    Amenta, N., Datar, M., Dirksen, A., de Bruijne, Marleen, Feragen, A., Ge, X., Pedersen, J., Howard, M., Owen, M., Petersen, Jens, Shi, J. & Xu, Q., 2015, Research in shape modeling. Leonard, K. & Tari, S. (red.). Springer, s. 57-79 23 s. (Association for Women in Mathematics Series, Bind 1).

    Publikation: Bidrag til bog/antologi/rapport › Bidrag til bog/antologi › Forskning › fagfællebedømt

  21. 2013
  22. Udgivet

    Carotid artery lumen segmentation in 3D free-hand ultrasound images using surface graph cuts

    Lorza, A. M. A., Carvalho, D. D. B., Petersen, Jens, Dijk, A. C. V., Lugt, A. V. D., Niessen, W. J., Klein, S. & de Bruijne, Marleen, 2013, Medical Image Computing and Computer-Assisted Intervention – MICCAI 2013: 16th International Conference, Nagoya, Japan, September 22-26, 2013, Proceedings, Part II. Mori, K., Sakuma, I., Sato, Y., Barillot, C. & Navab, N. (red.). Springer, s. 542-549 8 s. (Lecture notes in computer science, Bind 8150).

    Publikation: Bidrag til bog/antologi/rapport › Konferencebidrag i proceedings › Forskning › fagfællebedømt

  23. Udgivet

    Carotid artery wall segmentation by coupled surface graph cuts

    Arias, A., Petersen, Jens, van Engelen, A., Tang, H., Selwaness, M., Witteman, J. C. M., van der Lugt, A., Niessen, W. & de Bruijne, Marleen, 2013, Medical Computer Vision. Recognition techniques and applications in medical imaging: Second International MICCAI Workshop, MCV 2012, Nice, France, Revised Selected Papers. Menze, B. H., Langs, G., Lu, L., Montillo, A., Tu, Z. & Criminisi, A. (red.). Springer, s. 38-47 10 s. (Lecture notes in computer science, Bind 7766).

    Publikation: Bidrag til bog/antologi/rapport › Konferencebidrag i proceedings › Forskning › fagfællebedømt

  24. Udgivet

    Geometric tree kernels: classification of COPD from airway tree geometry

    Feragen, A., Petersen, Jens, Grimm, D., Dirksen, A., Pedersen, J. J. H., Borgwardt, K. & de Bruijne, Marleen, 2013, Information Processing in Medical Imaging: 23rd International Conference, IPMI 2013, Asilomar, CA, USA, June 28–July 3, 2013. Proceedings. Gee, J. C., Joshi, S., Pohl, K. M., Wells, W. M. & Zöllei, L. (red.). Springer, s. 171-183 13 s. (Lecture notes in computer science, Bind 7917).

    Publikation: Bidrag til bog/antologi/rapport › Konferencebidrag i proceedings › Forskning › fagfællebedømt

  25. Udgivet

    Quantitative airway analysis in longitudinal studies using groupwise registration and 4D optimal surfaces

    Petersen, Jens, Modat, M., Cardoso, M. J., Dirksen, A., Ourselin, S. & de Bruijne, Marleen, 2013, Medical Image Computing and Computer-Assisted Intervention – MICCAI 2013: 16th International Conference, Nagoya, Japan, September 22-26, 2013, Proceedings, Part II. Mori, K., Sakuma, I., Sato, Y., Barillot, C. & Navab, N. (red.). Springer, Bind 2. s. 287-294 8 s. (Lecture notes in computer science, Bind 8150).

    Publikation: Bidrag til bog/antologi/rapport › Konferencebidrag i proceedings › Forskning › fagfællebedømt

  26. Udgivet

    Scalable kernels for graphs with continuous attributes

    Feragen, A., Kasenburg, N., Petersen, Jens, de Bruijne, Marleen & Borgwardt, K., 2013, 27th Annual Conference on Neural Information Processing Systems 2013: NIPS 2013. Burges, C. J. C., Bottou, L., Welling, M., Ghahramani, Z. & Weinberger, K. Q. (red.). Curran Associates, Inc., s. 216-224 9 s. (Advances in Neural Information Processing Systems, Bind 26).

    Publikation: Bidrag til bog/antologi/rapport › Konferencebidrag i proceedings › Forskning › fagfællebedømt

  27. Udgivet

    Tree-space statistics and approximations for large-scale analysis of anatomical trees

    Feragen, A., Owen, M., Petersen, Jens, Wille, M. M. W., Thomsen, L. H., Dirksen, A. & de Bruijne, Marleen, 2013, Information Processing in Medical Imaging: 23rd International Conference, IPMI 2013, Asilomar, CA, USA, June 28–July 3, 2013. Proceedings. Gee, J. C., Joshi, S., Pohl, K. M., Wells, W. M. & Zöllei, L. (red.). Springer, s. 74-85 12 s. (Lecture notes in computer science, Bind 7917).

    Publikation: Bidrag til bog/antologi/rapport › Konferencebidrag i proceedings › Forskning › fagfællebedømt

  28. 2012
  29. Udgivet

    A hierarchical scheme for geodesic anatomical labeling of airway trees

    Feragen, A., Petersen, Jens, Owen, M., Lo, P. C. P., Thomsen, L., Wille, M. M. W., Dirksen, A. & de Bruijne, Marleen, 2012, Medical Image Computing and Computer-Assisted Intervention – MICCAI 2012: 15th International Conference, Nice, France, October 1-5, 2012, Proceedings, Part III. Ayache, N., Delingette, H., Golland, P. & Mori, K. (red.). Springer, s. 147-155 9 s. (Lecture notes in computer science, Bind 7512).

    Publikation: Bidrag til bog/antologi/rapport › Konferencebidrag i proceedings › Forskning › fagfællebedømt

  30. 2011
  31. Udgivet

    Dissimilarity-based classification of anatomical tree structures

    Sørensen, L., Lo, P. C. P., Dirksen, A., Petersen, Jens & de Bruijne, Marleen, 2011, Information Processing in Medical Imaging: 22nd International Conference, IPMI 2011, Kloster Irsee, Germany, July 3-8, 2011. Proceedings. Székely, G. & Hahn, H. K. (red.). Springer, s. 475-485 11 s. (Lecture notes in computer science, Bind 6801).

    Publikation: Bidrag til bog/antologi/rapport › Konferencebidrag i proceedings › Forskning › fagfællebedømt

  32. Udgivet

    Longitudinal analysis of airways using registration

    Petersen, Jens, Gorbunova, V., Nielsen, Mads, Dirksen, A., Lo, P. C. P. & de Bruijne, Marleen, 2011, The Fourth International Workshop on Pulmonary Image Analysis. Beichel, R., de Bruijne, M., van Ginneken, B., Kabus, S., Kiraly, A., Kuhnigk, J-M., McClelland, J., Mori, K., van Rikxoort, E. & Rit, S. (red.). CreateSpace Independent Publishing Platform , s. 11-22 12 s.

    Publikation: Bidrag til bog/antologi/rapport › Konferencebidrag i proceedings › Forskning › fagfællebedømt

  33. Udgivet

    Optimal graph based segmentation using flow lines with application to airway wall segmentation

    Petersen, Jens, Nielsen, Mads, Lo, P. C. P., Saghir, Z., Dirksen, A. & de Bruijne, Marleen, 2011, Information Processing in Medical Imaging: 22nd International Conference, IPMI 2011, Kloster Irsee, Germany, July 3-8, 2011. Proceedings. Székely, G. & Hahn, H. K. (red.). Springer, s. 49-60 12 s. (Lecture notes in computer science, Bind 6801).

    Publikation: Bidrag til bog/antologi/rapport › Konferencebidrag i proceedings › Forskning › fagfællebedømt

  34. 2010
  35. Udgivet

    Quantitative analysis of airway abnormalities in CT

    Petersen, Jens, Lo, P. C. P., Nielsen, Mads, Edula, G., Ashraf, H., Dirksen, A. & de Bruijne, Marleen, 2010, Medical Imaging 2010: computer-aided Diagnosis. Karssemeijer, N. & Summers, R. M. (red.). SPIE - International Society for Optical Engineering, 12 s. 76241S. (Progress in Biomedical Optics and Imaging; Nr. 34, Bind 11).

    Publikation: Bidrag til bog/antologi/rapport › Konferencebidrag i proceedings › Forskning › fagfællebedømt

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