Ansatte – Københavns Universitet

Simultaneous synthesis of FLAIR and segmentation of white matter hypointensities from T1 MRIs

Publikation: KonferencebidragPaperForskning

Mauricio Orbes-Arteaga, Manuel Jorge Cardoso, Lauge Sørensen, Marc Modat, Sebastien Ourselin, Mads Nielsen, Akshay Sadananda Uppinakudru Pai


Segmenting vascular pathologies such as white matter lesions in Brain magnetic resonance images (MRIs) require acquisition of multiple sequences such as T1-weighted (T1-w) --on which lesions appear hypointense-- and fluid attenuated inversion recovery (FLAIR) sequence --where lesions appear hyperintense--. However, most of the existing retrospective datasets do not consist of FLAIR sequences. Existing missing modality imputation methods separate the process of imputation, and the process of segmentation. In this paper, we propose a method to link both modality imputation and segmentation using convolutional neural networks. We show that by jointly optimizing the imputation network and the segmentation network, the method not only produces more realistic synthetic FLAIR images from T1-w images, but also improves the segmentation of WMH from T1-w images only.
OriginalsprogEngelsk
Publikationsdato2018
Antal sider8
StatusUdgivet - 2018
Begivenhed1st Conference on Medical Imaging with Deep Learning (MIDL 2018) - Amsterdam, Holland
Varighed: 4 jul. 20186 jul. 2018

Konference

Konference1st Conference on Medical Imaging with Deep Learning (MIDL 2018)
LandHolland
ByAmsterdam
Periode04/07/201806/07/2018

ID: 199025688