Wouter Boomsma
Professor
Machine Learning
Universitetsparken 1
2100 København Ø
- 2023
- Published
Adaptive Cholesky Gaussian Processes
Bartels, S., Stensbo-Smidt, K., Moreno-Muñoz, P., Boomsma, Wouter, Frellsen, J. & Hauberg, S., 2023, In: Proceedings of Machine Learning Research. 206, p. 408--452 44 p.Research output: Contribution to journal › Conference article › Research › peer-review
- Published
Kernel-Matrix Determinant Estimates from stopped Cholesky Decomposition
Bartels, S., Boomsma, Wouter, Frellsen, J. & Garreau, D., 2023, In: Journal of Machine Learning Research. 24, p. 1-57 71.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Lysine deserts prevent adventitious ubiquitylation of ubiquitin-proteasome components
Kampmeyer, Caroline, Grønbæk-Thygesen, Martin, Oelerich, N., Tatham, M. H., Cagiada, Matteo, Lindorff-Larsen, K., Boomsma, Wouter, Hofmann, K. & Hartmann-Petersen, Rasmus, 2023, In: Cellular and Molecular Life Sciences. 80, 6, 18 p., 143.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Phosphorylation of Schizosaccharomyces pombe Dss1 mediates direct binding to the ubiquitin-ligase Dma1 in vitro
Jacobsen, Nina Louise, Bloch, Magnus Borup, Millard, P. S., Ruidiaz, Sarah Frederiksen, Elsborg, Jonas Damgaard, Boomsma, Wouter, Hendus-Altenburger, R., Hartmann-Petersen, Rasmus & Kragelund, Birthe Brandt, 2023, In: Protein Science. 32, 9, 16 p., e4733.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Rapid protein stability prediction using deep learning representations
Blaabjerg, Lasse Møller, Kassem, M. M., Good, L. L., Jonsson, Nicolas, Cagiada, Matteo, Johansson, Kristoffer Enøe, Boomsma, Wouter, Stein, Amelie & Lindorff-Larsen, Kresten, 2023, In: eLife. 12, 19 p., e82593.Research output: Contribution to journal › Journal article › Research › peer-review
- 2022
- Published
A context-dependent and disordered ubiquitin-binding motif
Dreier, Jesper Elmsted, Prestel, Andreas, Martins, J. M., Brøndum, S. S., Nielsen, Olaf, Garbers, Anna Engstrøm, Suga, H., Boomsma, Wouter, Rogers, Joseph Matthew, Hartmann-Petersen, Rasmus & Kragelund, Birthe Brandt, 2022, In: Cellular and molecular life sciences : CMLS. 79, 9, 21 p., 484.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Learning meaningful representations of protein sequences
Detlefsen, N. S., Hauberg, S. & Boomsma, Wouter, 2022, In: Nature Communications. 13, 1, p. 1-12 1914.Research output: Contribution to journal › Journal article › Research › peer-review
- 2021
- Published
Developing and validating COVID-19 adverse outcome risk prediction models from a bi-national European cohort of 5594 patients
Jimenez-Solem, E., Petersen, Tonny Studsgaard, Hansen, C., Hansen, C., Lioma, Christina, Igel, Christian, Boomsma, Wouter, Krause, Oswin, Lorenzen, S., Selvan, Raghav, Petersen, Janne, Nyeland, M. E., Ankarfeldt, Mikkel Zöllner, Virenfeldt, G. M., Winther-Jensen, M., Linneberg, Allan René, Mehdipour Ghazi, Mostafa, Detlefsen, N., Lauritzen, Andreas, Smith, Abraham George, de Bruijne, Marleen, Ibragimov, Bulat, Petersen, Jens, Lillholm, Martin, Middleton, Jon Anthony, Mogensen, S. H., Thorsen-Meyer, H., Perner, Anders, Helleberg, M., Kaas-Hansen, Benjamin Skov, Bonde, M., Bonde, A., Pai, A., Nielsen, Mads & Sillesen, Martin Hylleholt, 2021, In: Scientific Reports. 11, 1, 12 p., 3246.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Single-particle diffusional fingerprinting: A machine-learning framework for quantitative analysis of heterogeneous diffusion
Pinholt, H. D., Bohr, S. S. R., Iversen, J. F., Boomsma, Wouter & Hatzakis, Nikos, 2021, In: Proceedings of the National Academy of Sciences of the United States of America. 118, 31, 7 p., e2104624118.Research output: Contribution to journal › Journal article › Research › peer-review
- 2020
- Published
Orchestration of signaling by structural disorder in class 1 cytokine receptors
Seiffert, P., Bugge, K., Nygaard, M., Haxholm, G. W., Martinsen, J. H., Pedersen, M. N., Arleth, Lise, Boomsma, Wouter & Kragelund, Birthe Brandt, 24 Aug 2020, In: Cell Communication and Signaling. 18, 1, 30 p., 132.Research output: Contribution to journal › Journal article › Research › peer-review
ID: 40103911
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2281
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Protein structure validation and refinement using amide proton chemical shifts derived from quantum mechanics
Research output: Contribution to journal › Journal article › Research › peer-review
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1421
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Inference of structure ensembles of flexible biomolecules from sparse, averaged data
Research output: Contribution to journal › Journal article › Research › peer-review
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1399
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Potentials of mean force for protein structure prediction vindicated, formalized and generalized
Research output: Contribution to journal › Journal article › Research › peer-review
Published