Marleen de Bruijne
Professor
Image Analysis, Computational Modelling and Geometry
Universitetsparken 1
2100 København Ø
- 2010
- Published
The Third International Workshop on Pulmonary Image Analysis
Brown, M. (ed.), de Bruijne, Marleen (ed.), Ding, K. (ed.), van Ginneken, B. (ed.), Kiraly, A. (ed.), Kuhnigk, J. (ed.), McClelland, J. R. (ed.), Mori, K. (ed.) & Reinhardt, J. M. (ed.), 2010, CreateSpace Independent Publishing Platform . 170 p.Research output: Book/Report › Anthology › Research › peer-review
- Published
Tracheomalacia assessment in pediatric patients with MRI: preliminary report
Ciet, P., Wielopolski, P. A., Lever, S., de Bruijne, Marleen, Lequin, M. H. & Tiddens, H. A., 2010.Research output: Contribution to conference › Conference abstract for conference › Research › peer-review
- Published
Vessel tree extraction using locally optimal paths
Lo, P. C. P., van Ginneken, B. & de Bruijne, Marleen, 2010, 2010 IEEE International Symposium on Biomedical Imaging: from nano to Macro. IEEE, p. 680-683Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
- Published
Vessel-guided airway tree segmentation: a voxel classification approach
Lo, P. C. P., Sporring, Jon, Ashraf, H., Pedersen, J. J. H. & de Bruijne, Marleen, 2010, In: Medical Image Analysis. 14, 4, p. 527-538 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- 2011
- Published
2D-3D shape reconstruction of the distal femur from stereo X-Ray imaging using statistical shape models
Baka, N., Kaptein, B. L., de Bruijne, Marleen, van Walsum, T., Giphart, J. E., Niessen, W. J. & Lelieveldt, B. P. F., 2011, In: Medical Image Analysis. 15, 6, p. 840-850 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A bottom-up approach for labeling of human airway trees
Lo, P., van Rikxoort, E. M., Goldin, J., Abtin, F., de Bruijne, Marleen & Brown, M., 2011, The Fourth International Workshop on Pulmonary Image Analysis . Beichel, R., de Bruijne, M., Kabus, S., Kiraly, A., Kuhnigk, J-M., McClelland, J., Mori, K., van Rikxoort, E. & Rit, S. (eds.). CreateSpace, p. 23-34 12 p.Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
- Published
A computer-aided diagnosis system for the early and differential diagnosis of neurodegenerative disease
Vrooman, H. A., Jasperse, M. M. S., Koek, M., Achterberg, F. V. D. L. A. H. C., de Bruijne, Marleen, Lugt, A. V. D. & Niessen, W. J., 2011, ECR Conference Proceedings 2011.Research output: Chapter in Book/Report/Conference proceeding › Conference abstract in proceedings › Research › peer-review
- Published
A geometric framework for statistics on trees
Feragen, A., Nielsen, Mads, Hauberg, S., Lo, P. C. P., de Bruijne, Marleen & Lauze, Francois Bernard, 2011, Department of Computer Science, University of Copenhagen. 47 p. (Koebenhavns Universitet. Datalogisk Institut. Rapport; No. 11/02).Research output: Book/Report › Report › Research
- Published
An airway tree-shape model for geodesic airway branch labeling
Feragen, A., Lo, P. C. P., Gorbunova, V., Nielsen, Mads, Dirksen, A., Reinhardt, J. M., Lauze, Francois Bernard & de Bruijne, Marleen, 2011, MFCA 2011: 3rd MICCAI Workshop on Mathematical Foundations of Computational Anatomy. Pennec, X., Joshi, S. & Nielsen, M. (eds.). p. 123-134 12 p.Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
CT scores correlate with survival in cystic fibrosis patients awaiting lung transplantation
Loeve, M., Hal, P. V., Robinson, P., Aitkin, M., de Bruijne, Marleen, Hop, W., Tiddens , H. A. W. M. & CT CFS Study Group, 2011, In: Journal of Cystic Fibrosis. 10, Supplement 1, p. S58 1 p., 227.Research output: Contribution to journal › Conference abstract in journal › Research › peer-review
- Published
Comparison of shape regression methods under landmark position uncertainty
Baka, N., Metz, C., Schaap, M., Lelieveldt, B., Niessen, W. & de Bruijne, Marleen, 2011, Medical Image Computing and Computer-Assisted Intervention – MICCAI 2011: 14th International Conference, Toronto, Canada, September 18-22, 2011, Proceedings, Part II. Fichtinger, G., Martel, A. & Peters, T. (eds.). Springer, Vol. Part II. p. 434-441 8 p. (Lecture notes in computer science, Vol. 6892).Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
- Published
Decline in lung density is accelerated in active smokers
Shaker, S. B., Dirksen, A., Lo, P. C. P., Skovgaard, Lene Theil, de Bruijne, Marleen & Pedersen, J. J. H., 2011. 1 p.Research output: Contribution to conference › Conference abstract for conference › Research › peer-review
- Published
Dissimilarity-based classification of anatomical tree structures
Sørensen, L., Lo, P. C. P., Dirksen, A., Petersen, Jens & de Bruijne, Marleen, 2011, Information Processing in Medical Imaging: 22nd International Conference, IPMI 2011, Kloster Irsee, Germany, July 3-8, 2011. Proceedings. Székely, G. & Hahn, H. K. (eds.). Springer, p. 475-485 11 p. (Lecture notes in computer science, Vol. 6801).Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
- Published
Distribution, size, and shape of abdominal aortic calcified deposits and their relationship to mortality in postmenopausal women
Nielsen, Mads, Ganz, Melanie, de Bruijne, Marleen, Dam , E., Karsdal , M. & Christiansen , C., 2011. 1 p.Research output: Contribution to conference › Conference abstract for conference › Research › peer-review
- Published
Estimating risk of future fracture or deformity of vertebrae of spine, by comparing processed data representing appearance of vertebra of spine with statistical model and deriving similarity between vertebra of spine and model
Ghosh, A., Nielsen, Mads, Karsdal, M. A., Christiansen, C., de Bruijne, Marleen & Petterson, P., 2011, IPC No. G06T-007/00, Patent No. WO2009124995-A1, 15 Oct 2009, Priority date 10 Apr 2008, Priority No. GB006509Research output: Patent
- Published
Evaluation of registration methods on thoracic CT: the EMPIRE10 challenge
Murphy, K., van Ginneken, B., Reinhardt, J., Kabus, S., Ding, K., Deng, X., Cao, K., Du, K., Christensen, G., Garcia, V., Vercauteren, T., Ayache, N., Commowick, O., Malandain, G., Glocker, B., Paragios, N., Navab, N., Gorbunova, V., Sporring, J., de Bruijne, M. & 34 others, , 2011, In: IEEE Transactions on Medical Imaging. 30, 11, p. 1901-1920 20 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Geometries on spaces of treelike shapes
Feragen, A., Lauze, Francois Bernard, Lo, P. C. P., de Bruijne, Marleen & Nielsen, Mads, 2011, Computer Vision – ACCV 2010 : 10th Asian Conference on Computer Vision, Queenstown, New Zealand, November 8-12, 2010, Revised Selected Papers, Part II. Kimmel, R., Klette, R. & Sugimoto, A. (eds.). Springer, p. 160-173 14 p. (Lecture notes in computer science, Vol. 6493).Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
- Published
Hippocampal shape predicts development of dementia in the general population
Achterberg, H., de Bruijne, Marleen, Lijn, F. V. D., den Heijer , T., Vernooij , M., Ikram, M. A. & Niessen, W., 2011. 1 p.Research output: Contribution to conference › Conference abstract for conference › Research › peer-review
- Published
Improved tissue segmentation by including an MR acquisition model
Poot, D. H. J., de Bruijne, Marleen, Vernooij, M. W., Ikram, M. A. & Niessen, W. J., 2011, Multimodal Brain Image Analysis: First International Workshop, MBIA 2011, Held in Conjunction with MICCAI 2011, Toronto, Canada, September 18, 2011. Proceedings. Liu, T., Shen, D., Ibanez, L. & Tao, X. (eds.). Springer, p. 152-159 8 p. (Lecture notes in computer science, Vol. 7012).Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
- Published
Longitudinal analysis of airways using registration
Petersen, Jens, Gorbunova, V., Nielsen, Mads, Dirksen, A., Lo, P. C. P. & de Bruijne, Marleen, 2011, The Fourth International Workshop on Pulmonary Image Analysis. Beichel, R., de Bruijne, M., van Ginneken, B., Kabus, S., Kiraly, A., Kuhnigk, J-M., McClelland, J., Mori, K., van Rikxoort, E. & Rit, S. (eds.). CreateSpace Independent Publishing Platform , p. 11-22 12 p.Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
- Published
Lung tissue classification in severe advanced cystic fibrosis from CT scans
Ciompi, F., Palaioroutas, A., Loeve, M., Pujol, O., Radeva, P., Tiddens, H. & de Bruijne, Marleen, 2011, The Fourth International Workshop on Pulmonary Image Analysis. Beichel, R., de Bruine, M., van Ginneken, B., Kabus, S., Kiraly, A., Kuhnigk, J-M., McClelland, J., Mori, K., van Rikxoort, E. & Rit, S. (eds.). CreateSpace Independent Publishing Platform , p. 57-68 12 p.Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
- Published
MRI tracheomalacia (TM) assessment in pediatric patients: feasibility study
Ciet, P., Wielopolski, P., Lever, S., Manniesing, R., de Bruijne, Marleen, Lequin, M. H. & Tiddens, H. A. W. M., 2011.Research output: Contribution to conference › Conference abstract for conference › Research › peer-review
- Published
Maximum a posteriori estimation of linear shape variation with application to vertebra and cartilage modeling
Crimi, A., Lillholm, Martin, Nielsen, Mads, Ghosh, A., de Bruijne, Marleen, Dam, E. B. & Sporring, Jon, 2011, In: IEEE Transactions on Medical Imaging. 30, 8, p. 1514-1526 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Method for computerized classification of e.g. computed tomography image, of lung of patient suffering from e.g. non-focal lung disease, involves combining probabilities within regions of interest to obtain quantitative fused probability
Nielsen, Mads, de Bruijne, Marleen & Sørensen, L., 2011, IPC No. G06K-009/00, Patent No. US2011280457-A1, 17 Nov 2011, Priority date 11 May 2010, Priority No. US333513PResearch output: Patent
- Published
Multiple classifier systems in texton-based approach for the classification of CT images of Lung
Gangeh, M. J., Sørensen, L., Shaker, S. B., Kamel, M. S. & de Bruijne, Marleen, 2011, Medical Computer Vision. Recognition Techniques and Applications in Medical Imaging: International MICCAI Workshop, MCV 2010, Beijing, China, September 20, 2010, Revised Selected Papers. Menze, B., Langs, G., Tu, Z. & Criminsi, A. (eds.). Springer, p. 153-163 11 p. (Lecture notes in computer science, Vol. 6533).Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
- Published
Optimal graph based segmentation using flow lines with application to airway wall segmentation
Petersen, Jens, Nielsen, Mads, Lo, P. C. P., Saghir, Z., Dirksen, A. & de Bruijne, Marleen, 2011, Information Processing in Medical Imaging: 22nd International Conference, IPMI 2011, Kloster Irsee, Germany, July 3-8, 2011. Proceedings. Székely, G. & Hahn, H. K. (eds.). Springer, p. 49-60 12 p. (Lecture notes in computer science, Vol. 6801).Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
- Published
Plaque characterization in ex vivo MRI evaluated by dense 3D correspondence with histology
van Engelen, A., de Bruijne, Marleen, Klein, S., Groen, H., Wentzel, J., van der Lugt, A. & Niessen, W., 2011.Research output: Contribution to conference › Conference abstract for conference › Research
- Published
Plaque characterization in ex vivo MRI evaluated by dense 3D correspondence with histology
van Engelen, A., de Bruijne, Marleen, Klein, S., Verhagen, H., Groen, H., Wentzel, J., van der Lugt, A. & Niessen, W., 2011, Medical Imaging 2011: computer-aided diagnosis. Summers, R. M. & van Ginneken, B. (eds.). SPIE - International Society for Optical Engineering, Vol. Part One. 11 p. 796329. (Progress in Biomedical Optics and Imaging; No. 32, Vol. 12).Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
- Published
Prediction of dementia by hippocampal shape analysis
Achterberg, H., van der Lijn, F., den Heijer, T., van der Lugt, A., Breteler, M., Niessen, W. & de Bruijne, Marleen, 2011.Research output: Contribution to conference › Conference abstract for conference › Research
- Published
Reversibility of trapped air on CT scans of cystic fibrosis patients, an automated approach
Loeve, M., de Bruijne, Marleen, Gorbunova, V., Hop, W. C. & Tiddens, H. A. W. M., 2011, In: Journal of Cystic Fibrosis. 10 , Supplement 1 , p. S51 1 p., 201.Research output: Contribution to journal › Conference abstract in journal › Research › peer-review
- Published
Robust shape regression for supervised vessel segmentation and its application to coronary segmentation in CTA
Schaap, M., van Walsum, T., Neefjes, L., Metz, C., Capuano, E., de Bruijne, Marleen & Niessen, W., 2011, In: IEEE Transactions on Medical Imaging. 30, 11, p. 1974-1986 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Short-term effect of changes in smoking behaviour on emphysema quantification by CT
Ashraf, H., Lo, P. C. P., Shaker, S. B., de Bruijne, Marleen, Dirksen, A., Tønnesen, P., Dahlbäck, M. & Pedersen, J. J. H., 2011, In: Thorax. 66, 1, p. 55-60Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Texture classification in pulmonary CT
Sørensen, L., J. Gangeh, M., B. Shaker, S. & de Bruijne, Marleen, 2011, Lung imaging and computer-aided diagnosis. El-Baz, A. & Suri, J. S. . (eds.). CRC Press, p. 343–367 25 p.Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review
- Published
The Fourth International Workshop on Pulmonary Image Analysis
Beichel, R. (ed.), de Bruijne, Marleen (ed.), van Ginneken, B. (ed.), Kabus, S. (ed.), Kiraly, A. (ed.), Kuhnigk, J. (ed.), McClelland, J. (ed.), Mori, K. (ed.), van Rikxoort, E. (ed.) & Rit, S. (ed.), 2011, CreateSpace Independent Publishing Platform . 270 p.Research output: Book/Report › Anthology › Research
- Published
Vertebral fracture risk (VFR) score for fracture prediction in postmenopausal Women
Lillholm, Martin, Ghosh, A., Pettersen, P. C., de Bruijne, Marleen, Dam, E. B., Karsdal, M. A., Christiansen, C., Genant, H. K. & Nielsen, Mads, 2011, In: Osteoporosis International. 22, 7, p. 2119-2128 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- 2012
- Published
3D+t/2D+t CTA-XA registration using population-based motion estimates
Baka, N., Metz, C. T., Schultz, C., Neefjes, L., van Geuns, R. J., Lelieveldt, B. P. F., Niessen, W. J., de Bruijne, Marleen & van Walsum, T., 2012, Proceedings, MICCAI-STENT'12: 1st MICCAI-Workshop on Computer Assisted Stenting . Demirci, L. & Radeva, U. (eds.). MICCAI , p. 64-71 8 p.Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
- Published
A computer aided detection system for cerebral microbleeds in brain MRI
Ghafaryasl, B., van der Lijn, F., Poels, M., Vrooman, H., Ikram, M. A., Niessen, W. J., van der Lugt, A., Vernooij, M. & de Bruijne, Marleen, 2012, 2012 9th IEEE International Symposium on Biomedical Imaging: from nano to macro. IEEE, p. 138-141 4 p.Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
A genome-wide association study identifies five loci influencing facial morphology in Europeans
Liu, F., van der Lijn, F., Schurmann, C., Zhu, G., Chakravarty, M. M., Hysi, P. G., Wollstein, A., Lao, O., de Bruijne, M., Ikram, M. A., van der Lugt, A., Rivadeneira, F., Uitterlinden, A. G., Hofman, A., Niessen, W. J., Homuth, G., de Zubicaray, G., McMahon, K. L., Thompson, P. M., Daboul, A. & 14 others, , 2012, In: P L o S Genetics. 8, 9, 13 p., e1002932.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A hierarchical scheme for geodesic anatomical labeling of airway trees
Feragen, A., Petersen, Jens, Owen, M., Lo, P. C. P., Thomsen, L., Wille, M. M. W., Dirksen, A. & de Bruijne, Marleen, 2012, Medical Image Computing and Computer-Assisted Intervention – MICCAI 2012: 15th International Conference, Nice, France, October 1-5, 2012, Proceedings, Part III. Ayache, N., Delingette, H., Golland, P. & Mori, K. (eds.). Springer, p. 147-155 9 p. (Lecture notes in computer science, Vol. 7512).Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
- Published
Automated brain structure segmentation based on atlas registration and appearance models
van der Lijn, F., de Bruijne, Marleen, Klein, S., den Heijer, T., Hoogendam, Y. Y., van der Lugt, A., Breteler, M. M. B. & Niessen, W. J., 2012, In: IEEE Transactions on Medical Imaging. 31, 2, p. 276-286 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Automated measurement of local white matter lesion volume
van der Lijn, F., Verhaaren, B. F. J., Ikram, M. A., Klein, S., de Bruijne, Marleen, Vrooman, H. A., Vernooij, M. W., Hammers, A., Rueckert, D., van der Lugt, A., Breteler, M. M. B. & Niessen, W. J., 2012, In: NeuroImage. 59, 4, p. 3901-3908 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
CT scores are predictive of survival in CF patients awaiting lung transplantation
Loeve, M., Hop, W. C. J., de Bruijne, Marleen, van Hal, P. T. W., Robinson, P., Aitken, M. L., Dodd, J. D. & Tiddens, H. A. W. M., 2012, In: Journal of Heart and Lung Transplantation. 31, 4, Supplement, p. s244 1 p., 713.Research output: Contribution to journal › Conference abstract in journal › Research › peer-review
- Published
Chest computed tomography scores are predictive of survival in patients with cystic fibrosis awaiting lung transplantation
Loeve, M., Hop, W. C. J., de Bruijne, Marleen, van Hal, P. T. W., Robinson, P., Aitken, M. L., Dodd, J. D. & Tiddens, H. A. W. M., 2012, In: American Journal of Respiratory and Critical Care Medicine. 185, 10, p. 1096–1103 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Distribution, size, and shape of abdominal aortic calcified deposits and their relationship to mortality in postmenopausal women
Ganz, Melanie, de Bruijne, Marleen, Dam, E. B., Pettersen, P., Karsdal, M. A., Christiansen, C. & Nielsen, Mads, 2012, In: International Journal of Biomedical Imaging. 2012, 8 p., 459286.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Extraction of airways from CT (EXACT’09)
Lo, P. C. P., Ginneken, B. V., Reinhardt, J. M., Yavarna, T., Jong, P. A. D., Irving, B., Fetita, C., Ortner, M., Pinho, R., Sijbers, J., Feuerstein, M., Fabijanska, A., Bauer, C., Beichel, R., Mendoza, C. S., Wiemker, R., Lee, J., Reeves, A. P., Born, S., Weinheimer, O. & 10 others, , 2012, In: I E E E Transactions on Medical Imaging. 31, 11, p. 2093-2107 15 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Factors influencing the decline in lung density in a Danish lung cancer screening cohort
Shaker, S. B., Dirksen, A., Lo, P. C. P., Skovgaard, Lene Theil, de Bruijne, Marleen & Pedersen, J. H., 2012, In: European Respiratory Journal. 40, 5, p. 1142-1148 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Fluoroscopic assessment of femoral kinematics using a statistical shape model
Baka, N., de Bruijne, Marleen, van Walsum, T., Kaptein, B., Giphart, E., Schaap, M., Niessen, W. & Lelieveldt, B., 2012, EORS 2012 Amsterdam: European Orthopaedic Research Society 20th annual meeting. EORS , p. 147148 2 p. 5B.2Research output: Chapter in Book/Report/Conference proceeding › Conference abstract in proceedings › Research › peer-review
- Published
Fully automated measurement of radiological angles in hip dysplasia using CT images
de Raedt, S., de Bruijne, Marleen, Mechlenburg, I., Stilling, M., Rømer, L. & Søballe, K., 2012. 1 p.Research output: Contribution to conference › Conference abstract for conference › Research › peer-review
- Published
Mass preserving image registration for lung CT
Gorbunova, V., Sporring, Jon, Lo, P. C. P., Loeve, M., Tiddens, H. A., Nielsen, Mads, Dirksen, A. & de Bruijne, Marleen, 2012, In: Medical Image Analysis. 16, 4, p. 786-795 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Multi-feature-based plaque characterization in ex vivo MRI trained by registration to 3D histology
Engelen, A. V., Niessen, W. J., Klein, S., Groen, H. C., Verhagen, H. J. M., Wentzel, J. J., Lugt, A. V. D. & de Bruijne, Marleen, 2012, In: Physics in Medicine and Biology. 57, 1, p. 241-256 16 p.Research output: Contribution to journal › Journal article › Research › peer-review
ID: 545222
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Evaluation of registration methods on thoracic CT: the EMPIRE10 challenge
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Atherosclerotic plaque component segmentation in combined carotid MRI and CTA data incorporating class label uncertainty
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Distribution, size, shape, growth potential and extent of abdominal aortic calcified deposits predict mortality in postmenopausal women
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