Mads Nielsen

Mads Nielsen

Professor

ORCID: 0000-0003-1535-068X

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  1. 2024
  2. Udgivet

    Heterogeneous Learning for Brain Lesion Segmentation, Detection, and Classification

    Llambias, Sebastian Nørgaard, Nielsen, Mads & Mehdipour Ghazi, Mostafa, 2024, Proceedings of the 5th Northern Lights Deep Learning Conference ({NLDL}). PMLR, s. 138-144 (Proceedings of Machine Learning Research, Bind 233).

    Publikation: Bidrag til bog/antologi/rapport › Konferencebidrag i proceedings › Forskning › fagfællebedømt

  3. Udgivet

    Local Gamma Augmentation for Ischemic Stroke Lesion Segmentation on MRI

    Middleton, Jon Anthony, Bauer, Marko, Johansen, Jacob, Perslev, Mathias, Sheng, K., Ingala, S., Nielsen, Mads & Pai, A., 2024, Proceedings of the 5th Northern Lights Deep Learning Conference ({NLDL}). PMLR, s. 158-164 (Proceedings of Machine Learning Research, Bind 233).

    Publikation: Bidrag til bog/antologi/rapport › Konferencebidrag i proceedings › Forskning › fagfællebedømt

  4. 2023
  5. Udgivet

    Deep Learning-Based Assessment of Cerebral Microbleeds in COVID-19

    Ferrer, N. R., Vendela Sagar, M., Klein, Kiril Vadimovic, Kruuse, Christina Rostrup, Nielsen, Mads & Mehdipour Ghazi, Mostafa, 2023, 2023 IEEE International Symposium on Biomedical Imaging, ISBI 2023. IEEE Computer Society Press, s. 1-4 4 s. (Proceedings - International Symposium on Biomedical Imaging, Bind 2023-April).

    Publikation: Bidrag til bog/antologi/rapport › Konferencebidrag i proceedings › Forskning › fagfællebedømt

  6. Udgivet

    An Analysis of Spatial-Spectral Dependence in Hyperspectral Autoencoders

    Laprade, W. M., Westergaard, Jesper Cairo, Nielsen, J., Nielsen, Mads & Dahl, A. B., 2023, Image Analysis - 23rd Scandinavian Conference, SCIA 2023, Proceedings. Gade, R., Felsberg, M. & Kämäräinen, J-K. (red.). Springer, s. 191-202 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), Bind 13886 LNCS).

    Publikation: Bidrag til bog/antologi/rapport › Konferencebidrag i proceedings › Forskning › fagfællebedømt

  7. Udgivet

    Instance-Specific Augmentation of Brain MRIs with Variational Autoencoders

    Middleton, Jon Anthony, Bauer, Marko, Johansen, Jacob, Nielsen, Mads, Sommer, Stefan Horst & Pai, A. S. U., 2023, Medical Applications with Disentanglements : First MICCAI Workshop, MAD 2022, Held in Conjunction with MICCAI 2022, Singapore, September 22, 2022, Proceedings. Springer, s. 49-58 (Lecture Notes in Computer Science, Bind 13823).

    Publikation: Bidrag til bog/antologi/rapport › Konferencebidrag i proceedings › Forskning › fagfællebedømt

  8. Udgivet

    Leveraging Shape and Spatial Information for Spontaneous Preterm Birth Prediction

    Pegios, P., Sejer, E. P. F., Lin, M., Bashir, Z., Svendsen, M. B. S., Nielsen, Mads, Petersen, E., Christensen, A. N., xgz472, xgz472 & Feragen, A., 2023, Simplifying Medical Ultrasound - 4th International Workshop, ASMUS 2023, Held in Conjunction with MICCAI 2023, Proceedings. Kainz, B., Müller, J. P., Kainz, B., Noble, A., Schnabel, J., Khanal, B. & Day, T. (red.). Springer, s. 57-67 11 s. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), Bind 14337 LNCS).

    Publikation: Bidrag til bog/antologi/rapport › Konferencebidrag i proceedings › Forskning › fagfællebedømt

  9. Udgivet

    Active Transfer Learning for 3D Hippocampus Segmentation

    Wu, J., Kang, Zhongfeng, Llambias, Sebastian Nørgaard, Mehdipour Ghazi, Mostafa & Nielsen, Mads, 2023, Medical Image Learning with Limited and Noisy Data - 2nd International Workshop, MILLanD 2023, Held in Conjunction with MICCAI 2023, Proceedings. Xue, Z., Antani, S., Zamzmi, G., Yang, F., Rajaraman, S., Liang, Z., Huang, S. X. & Linguraru, M. G. (red.). Springer, s. 224-234 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), Bind 14307 LNCS).

    Publikation: Bidrag til bog/antologi/rapport › Konferencebidrag i proceedings › Forskning › fagfællebedømt

  10. 2021

  11. Lesion-wise evaluation for effective performance monitoring of small object segmentation

    Groothuis, I., Sudre, C. H., Ingala, S., Barnes, J., Gispert, J. D., Sørensen, L., Pai, A., Nielsen, Mads, Ourselin, S., Cardoso, M. J., Barkhof, F. & Modat, M., 2021, Medical Imaging 2021: Image Processing. Isgum, I. & Landman, B. A. (red.). SPIE, s. 1-8 1159608. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE, Bind 11596).

    Publikation: Bidrag til bog/antologi/rapport › Konferencebidrag i proceedings › Forskning › fagfællebedømt

  12. 2020
  13. Udgivet

    Lung Segmentation from Chest X-rays using Variational Data Imputation

    Selvan, Raghav, Dam, Erik Bjørnager, Rischel, S., Sheng, K., Nielsen, Mads & Pai, A., 20 maj 2020, I: OpenReview.net. 7 s.

    Publikation: Bidrag til tidsskrift › Konferenceartikel › Forskning

  14. 2019
  15. Udgivet

    MRI Biomarkers Improve Disease Progression Modeling-Based Prediction of Cognitive Decline

    Mehdipour Ghazi, Mostafa, Nielsen, Mads, Pai, A. S. U., Modat , M., Cardoso , J., Ourselin, S. & Sorensen, L., 2019. 1 s.

    Publikation: Konferencebidrag › Konferenceabstrakt til konference › Forskning

  16. Udgivet

    On the initialization of long short-term memory networks

    Mehdipour Ghazi, Mostafa, Nielsen, Mads, Pai, A., Modat, M., Cardoso, M. J., Ourselin, S. & Sørensen, L., 2019, Neural Information Processing - 26th International Conference, ICONIP 2019, Proceedings. Gedeon, T., Wong, K. W. & Lee, M. (red.). Springer VS, s. 275-286 12 s. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), Bind 11953 LNCS).

    Publikation: Bidrag til bog/antologi/rapport › Konferencebidrag i proceedings › Forskning › fagfællebedømt

  17. Udgivet

    Knowledge Distillation for Semi-supervised Domain Adaptation

    Orbes-Arteaga, M., Cardoso, J., Sørensen, L., Igel, Christian, Ourselin, S., Modat, M., Nielsen, Mads & Pai, A., 1 jan. 2019, OR 2.0 Context-Aware Operating Theaters and Machine Learning in Clinical Neuroimaging - 2nd International Workshop, OR 2.0 2019, and 2nd International Workshop, MLCN 2019, Held in Conjunction with MICCAI 2019, Proceedings. Zhou, L., Sarikaya, D., Kia, S. M., Speidel, S., Malpani, A., Hashimoto, D., Habes, M., Löfstedt, T., Ritter, K. & Wang, H. (red.). Springer VS, s. 68-76 9 s. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), Bind 11796 LNCS).

    Publikation: Bidrag til bog/antologi/rapport › Konferencebidrag i proceedings › Forskning › fagfællebedømt

  18. Udgivet

    Multi-domain adaptation in brain MRI through paired consistency and adversarial learning

    Orbes-Arteaga, M., Varsavsky, T., Sudre, C. H., Eaton-Rosen, Z., Haddow, L. J., Sørensen, L., Nielsen, Mads, Pai, A., Ourselin, S., Modat, M., Nachev, P. & Cardoso, M. J., 2019, Domain Adaptation and Representation Transfer and Medical Image Learning with Less Labels and Imperfect Data First MICCAI Workshop, DART 2019 and First International Workshop, MIL3ID 2019 Shenzhen, Held in Conjunction with MICCAI 2019 Shenzhen, 2019 Proceedings. Wang, Q., Milletari, F., Rieke, N., Nguyen, H. V., Roysam, B., Albarqouni, S., Cardoso, M. J., Xu, Z., Kamnitsas, K., Patel, V., Jiang, S., Zhou, K., Luu, K. & Le, N. (red.). Springer VS, s. 54-62 9 s. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), Bind 11795 LNCS).

    Publikation: Bidrag til bog/antologi/rapport › Konferencebidrag i proceedings › Forskning › fagfællebedømt

  19. Udgivet

    PADDIT: Probabilistic Augmentation of Data using Diffeomorphic Image Transformation

    Orbes-Arteaga, M., Sørensen, L., Cardoso , J., Modat , M., Ourselin, S., Sommer, Stefan Horst, Nielsen, Mads, Igel, Christian & Pai, A. S. U., 2019, Proceedings, SPIE 10949, Medical Imaging 2019: Image Processing . SPIE - International Society for Optical Engineering, 6 s.

    Publikation: Bidrag til bog/antologi/rapport › Konferencebidrag i proceedings › Forskning › fagfællebedømt

  20. Udgivet

    UNSUPERVISED MACHINE LEARNING ON BASELINE BRAIN MRI IDENTIFIES MCI SUBGROUP WITH A FASTER DECLINE OVER TWO YEARS COMPARED TO CLASSICAL HIPPOCAMPAL SPARING AD SUBTYPE

    Sørensen, L., Pai, A., Nielsen, Mads, Leverenz, J. B. & Pillai, J. A., 2019, I: Alzheimer's & Dementia. 15, 7, s. P1420 1 s., P4-326.

    Publikation: Bidrag til tidsskrift › Konferenceabstrakt i tidsskrift › Forskning › fagfællebedømt

  21. 2018
  22. Udgivet

    Robust training of recurrent neural networks to handle missing data for disease progression modeling

    Mehdipour Ghazi, Mostafa, Nielsen, Mads, Pai, A. S. U., Cardoso, M. J., Modat, M., Ourselin, S. & Sørensen, L., 2018. 9 s.

    Publikation: Konferencebidrag › Paper › Forskning

  23. Udgivet

    Simultaneous synthesis of FLAIR and segmentation of white matter hypointensities from T1 MRIs

    Orbes-Arteaga, M., Cardoso, M. J., Sørensen, L., Modat, M., Ourselin, S., Nielsen, Mads & Pai, A. S. U., 2018. 8 s.

    Publikation: Konferencebidrag › Paper › Forskning

  24. 2017
  25. Udgivet

    Density-based non-rigid registration of diffusion-weighted images

    Jensen, H. G., Lauze, Francois Bernard, Nielsen, Mads & Darkner, Sune, apr. 2017.

    Publikation: Konferencebidrag › Konferenceabstrakt til konference › Forskning › fagfællebedømt

  26. Udgivet

    Convolutional neural networks for segmentation and object detection of human semen

    Nissen, M. S., Krause, Oswin, Almstrup, Kristian, Kjærulff, S., Nielsen, T. T. & Nielsen, Mads, 2017, Image Analysis: 20th Scandinavian Conference, SCIA 2017, Tromsø, Norway, June 12–14, 2017, Proceedings, Part I. Sharma, P. & Bianchi, F. M. (red.). Springer, Bind Part 1. s. 397-406 10 s. (Lecture notes in computer science, Bind 10269).

    Publikation: Bidrag til bog/antologi/rapport › Konferencebidrag i proceedings › Forskning › fagfællebedømt

  27. Udgivet

    A statistical model for simultaneous template estimation, bias correction, and registration of 3D brain images

    Pai, A. S. U., Sommer, Stefan Horst, Raket, L. L., Kühnel, L., Darkner, Sune, Sørensen, L. & Nielsen, Mads, 2017, Medical Computer Vision and Bayesian and Graphical Models for Biomedical Imaging: MICCAI 2016 International Workshops, MCV and BAMBI, Athens, Greece, October 21, 2016, Revised Selected Papers. Müller, H., Kelm, B. M., Arbel, T., Cai, W., Cardoso, M. J., Langs, G., Menze, B., Metaxas, D., Montillo, A., Wells, W. M., Zhang, S., Chung, A. C. S., Jenkinson, M. & Ribbens, A. (red.). Springer, s. 151-159 9 s. (Lecture notes in computer science, Bind 10081).

    Publikation: Bidrag til bog/antologi/rapport › Konferencebidrag i proceedings › Forskning › fagfællebedømt

  28. Udgivet

    Hippocampal texture predicts rate of cognitive decline in mild cognitive impairment

    Pai, A. S. U., Pillai, J. A., Sørensen, L., Darkner, Sune, Sommer, Stefan Horst & Nielsen, Mads, jul. 2017, I: Alzheimer's & Dementia. 13, 7, supplement, s. P1356 1 s., P4-225.

    Publikation: Bidrag til tidsskrift › Konferenceabstrakt i tidsskrift › Forskning

  29. 2016
  30. Udgivet

    Learning density independent texture features

    Kallenberg, M. G. J., Nielsen, Mads, Holland, K., Karssemeijer, N., Igel, Christian & Lillholm, Martin, 2016, Breast Imaging: 13th International Workshop, IWDM 2016, Malmö, Sweden, June 19-22, 2016, Proceedings. Tingberg, A., Lång, K. & Timberg, P. (red.). Springer, s. 299-306 8 s. (Lecture notes in computer science, Bind 9699).

    Publikation: Bidrag til bog/antologi/rapport › Konferencebidrag i proceedings › Forskning › fagfællebedømt

  31. Udgivet

    Supervised hub-detection for brain connectivity

    Kasenburg, N., Liptrot, M. G., Reislev, N. L., Garde, Ellen, Nielsen, Mads & Feragen, A., 2016, Medical Imaging 2016: Image Processing. Styner, M. A. & Angelini, E. D. (red.). SPIE - International Society for Optical Engineering, 9 s. 978409. (Progress in Biomedical Optics and Imaging; Nr. 39, Bind 17).

    Publikation: Bidrag til bog/antologi/rapport › Konferencebidrag i proceedings › Forskning › fagfællebedømt

  32. Udgivet

    Combining the boundary shift integral and tensor-based morphometry for brain atrophy estimation

    Michalkiewicz, M. D., Pai, A. S. U., Leung, K. K., Sommer, Stefan Horst, Darkner, Sune, Sørensen, L., Sporring, Jon & Nielsen, Mads, 2016, Medical imaging 2016: Image processing. Styner, M. A. & Angelini, E. D. (red.). SPIE - International Society for Optical Engineering, 6 s. 978406. (Progress in Biomedical Optics and Imaging).

    Publikation: Bidrag til bog/antologi/rapport › Konferencebidrag i proceedings › Forskning › fagfællebedømt

  33. Udgivet

    Do dementia biomarkers have a sigmoid trajectory? Insights from non-linear mixed effects modeling

    Pai, A. S. U., Sommer, Stefan Horst, Raket, L. L., Sørensen, L. & Nielsen, Mads, 2016, I: Alzheimer's & Dementia. 12, 7, Supplement, s. P356 1 s., O4-09-06.

    Publikation: Bidrag til tidsskrift › Konferenceabstrakt i tidsskrift › Forskning › fagfællebedømt

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