Mads Nielsen
Mads Nielsen

Professor


  1. Udgivet

    Reconstruction of Optical Thickness from Hoffman Modulation Contrast Images

    Olsen, N. H., Sporring, Jon, Nielsen, Mads, Hnida, C. & Ziebe, S., 2003, Image Analysis: 13th Scandinavian Conference, SCIA 2003 Halmstad, Sweden, June 29 – July 2, 2003 Proceedings. Springer, s. 445-454 (Lecture notes in computer science, Bind 2749/2003).

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  2. Lie group modeling of nonlinear point set shape variability

    Olsen, N. H. & Nielsen, Mads, 2000, Algebraic Frames for the Perception-Action Cycle. Springer Science+Business Media, s. 259-268 10 s.

    Publikation: Bidrag til bog/antologi/rapportBidrag til bog/antologiForskningfagfællebedømt

  3. Generic events for the gradient squared. Proc. 1 st Scale Space Conference

    Olsen, O. & Nielsen, Mads, 1997, Generic events for the gradient squared. Proc. 1 st Scale Space Conference. s. 101-112 12 s. (Lecture notes in computer science).

    Publikation: Bidrag til bog/antologi/rapportBidrag til bog/antologiForskningfagfællebedømt

  4. Multi-scale gradient magnitude watershed segmentation

    Olsen, O. F. & Nielsen, Mads, 1997, Image Analysis and Processing. Springer Science+Business Media, s. 6-13 8 s.

    Publikation: Bidrag til bog/antologi/rapportBidrag til bog/antologiForskningfagfællebedømt

  5. The Generic Structure of the Optic Flow Field

    Olsen, O. F. & Nielsen, Mads, 2006, I : Journal of Mathematical Imaging and Vision. 24, 1, s. 37-53

    Publikation: Bidrag til tidsskriftTidsskriftartikelForskningfagfællebedømt

  6. Udgivet

    PADDIT: Probabilistic Augmentation of Data using Diffeomorphic Image Transformation

    Orbes-Arteaga, M., xfj310, xfj310, Cardoso , J., Modat , M., Ourselin, S., Sommer, Stefan Horst, Nielsen, Mads, Igel, Christian & Pai, Akshay Sadananda Uppinakudru, 2019, Proceedings, SPIE 10949, Medical Imaging 2019: Image Processing . SPIE - International Society for Optical Engineering, 6 s.

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  7. Udgivet

    Simultaneous synthesis of FLAIR and segmentation of white matter hypointensities from T1 MRIs

    Orbes-Arteaga, M., Cardoso, M. J., xfj310, xfj310, Modat, M., Ourselin, S., Nielsen, Mads & Pai, Akshay Sadananda Uppinakudru, 2018. 8 s.

    Publikation: KonferencebidragPaperForskning

  8. Udgivet

    Knowledge Distillation for Semi-supervised Domain Adaptation

    Orbes-Arteaga, M., Cardoso, J., xfj310, xfj310, Igel, Christian, Ourselin, S., Modat, M., Nielsen, Mads & Pai, Akshay Sadananda Uppinakudru, 1 jan. 2019, OR 2.0 Context-Aware Operating Theaters and Machine Learning in Clinical Neuroimaging - 2nd International Workshop, OR 2.0 2019, and 2nd International Workshop, MLCN 2019, Held in Conjunction with MICCAI 2019, Proceedings. Zhou, L., Sarikaya, D., Kia, S. M., Speidel, S., Malpani, A., Hashimoto, D., Habes, M., Löfstedt, T., Ritter, K. & Wang, H. (red.). Springer VS, s. 68-76 9 s. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), Bind 11796 LNCS).

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  9. Udgivet

    Multi-domain adaptation in brain MRI through paired consistency and adversarial learning

    Orbes-Arteaga, M., Varsavsky, T., Sudre, C. H., Eaton-Rosen, Z., Haddow, L. J., xfj310, xfj310, Nielsen, Mads, Pai, Akshay Sadananda Uppinakudru, Ourselin, S., Modat, M., Nachev, P. & Cardoso, M. J., 2019, Domain Adaptation and Representation Transfer and Medical Image Learning with Less Labels and Imperfect Data First MICCAI Workshop, DART 2019 and First International Workshop, MIL3ID 2019 Shenzhen, Held in Conjunction with MICCAI 2019 Shenzhen, 2019 Proceedings. Wang, Q., Milletari, F., Rieke, N., Nguyen, H. V., Roysam, B., Albarqouni, S., Cardoso, M. J., Xu, Z., Kamnitsas, K., Patel, V., Jiang, S., Zhou, K., Luu, K. & Le, N. (red.). Springer VS, s. 54-62 9 s. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), Bind 11795 LNCS).

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  10. Udgivet

    Subclinical depressive symptoms during late midlife and structural brain alterations: A longitudinal study of Danish men born in 1953

    Osler, Merete, xfj310, xfj310, Rozing, M., Calvo, O. P., Nielsen, Mads & Rostrup, E., apr. 2018, I : Human Brain Mapping. 39, 4, s. 1789-1795

    Publikation: Bidrag til tidsskriftTidsskriftartikelForskningfagfællebedømt

  11. Udgivet

    Do dementia biomarkers have a sigmoid trajectory? Insights from non-linear mixed effects modeling

    Pai, Akshay Sadananda Uppinakudru, Sommer, Stefan Horst, Raket, L. L., xfj310, xfj310 & Nielsen, Mads, 2016, I : Alzheimer's & Dementia. 12, 7, Supplement, s. P356 1 s., O4-09-06.

    Publikation: Bidrag til tidsskriftKonferenceabstrakt i tidsskriftForskningfagfællebedømt

  12. Udgivet

    White matter hypointensity growth rate correlates with rate of brain atrophy

    Pai, Akshay Sadananda Uppinakudru, xfj310, xfj310, Darkner, Sune, Sporring, Jon, Rostrup, E. & Nielsen, Mads, 2014, I : Alzheimer's & Dementia. 10, 4, Supplement, s. P414 1 s., P1-285.

    Publikation: Bidrag til tidsskriftKonferenceabstrakt i tidsskriftForskningfagfællebedømt

  13. Udgivet

    Diffeomorphic image registration with automatic time-step adjustment

    Pai, Akshay Sadananda Uppinakudru, Klein, S., Sommer, Stefan Horst, Darkner, Sune, Sporring, Jon & Nielsen, Mads, 2015, Biomedical Imaging (ISBI), 2015 IEEE 12th International Symposium on. IEEE, s. 1085-1088 4 s.

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  14. Udgivet
  15. Udgivet

    Evaluation of bias in brain atrophy estimation

    Pai, Akshay Sadananda Uppinakudru, Darkner, Sune, xfj310, xfj310, Erleben, L. L., Mysling, P., Sporring, Jon, Dam, E. & Nielsen, Mads, 2012, NIBAD '12: MICCAI 2012 Workshop on Novel Imaging Biomarkers for Alzheimer’s Disease and Related Disorders. Wang, L., Yushkevich, P. & Ourselin, S. (red.). MICCAI , s. 198-206 9 s.

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  16. Udgivet

    Characterization of errors in deep learning-based brain MRI segmentation

    Pai, Akshay Sadananda Uppinakudru, Teng, Y., Blair, Joseph Patrick Michele, Kallenberg, M. G. J., Dam, Erik Bjørnager, Sommer, Stefan Horst, Igel, Christian & Nielsen, Mads, 2017, Deep learning for medical image analysis. Zhou, S. K., Greenspan, H. & Shen, D. (red.). Academic Press, s. 223–242 20 s.

    Publikation: Bidrag til bog/antologi/rapportBidrag til bog/antologiForskningfagfællebedømt

  17. Udgivet

    Localized cerebral atrophy acceleration during Alzheimer’s disease

    Pai, Akshay Sadananda Uppinakudru, xfj310, xfj310, Darkner, Sune, Lillholm, Martin, Dam, E. B., Sporring, Jon & Nielsen, Mads, 2013, I : Alzheimer's & Dementia. 9, 4, Supplement, s. P151 1 s., O1-10-06.

    Publikation: Bidrag til tidsskriftKonferenceabstrakt i tidsskriftForskningfagfællebedømt

  18. Udgivet

    Hippocampal texture predicts rate of cognitive decline in mild cognitive impairment

    Pai, Akshay Sadananda Uppinakudru, Pillai, J. A., xfj310, xfj310, Darkner, Sune, Sommer, Stefan Horst & Nielsen, Mads, jul. 2017, I : Alzheimer's & Dementia. 13, 7, supplement, s. P1356 1 s., P4-225.

    Publikation: Bidrag til tidsskriftKonferenceabstrakt i tidsskriftForskning

  19. Udgivet

    Kernel bundle diffeomorphic image registration using stationary velocity fields and Wendland basis functions

    Pai, Akshay Sadananda Uppinakudru, Sommer, Stefan Horst, xfj310, xfj310, Darkner, Sune, Sporring, Jon & Nielsen, Mads, 2016, I : IEEE transactions on medical imaging. 35, 6, s. 1369-1380 12 s.

    Publikation: Bidrag til tidsskriftTidsskriftartikelForskningfagfællebedømt

  20. Udgivet

    White matter hypointensity growth rate correlates with rate of brain atrophy

    Pai, Akshay Sadananda Uppinakudru, xfj310, xfj310, Darkner, Sune, Sporring, Jon, Rostrup, E. & Nielsen, Mads, 2014, I : Alzheimer's & Dementia. 10, 4, Supplement, s. P75-P76 2 s., IC-P-131.

    Publikation: Bidrag til tidsskriftKonferenceabstrakt i tidsskriftForskningfagfællebedømt

  21. Udgivet

    Stepwise inverse consistent Euler’s scheme for diffeomorphic image registration

    Pai, Akshay Sadananda Uppinakudru, Sommer, Stefan Horst, Darkner, Sune, xfj310, xfj310, Sporring, Jon & Nielsen, Mads, 2014, Biomedical Image Registration: 6th International Workshop, WBIR 2014, London, UK, July 7-8, 2014. Proceedings. Ourselin, S. & Modat, M. (red.). Springer, s. 223-230 8 s. (Lecture notes in computer science, Bind 8545).

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  22. Udgivet

    Cube propagation for focal brain atrophy estimation

    Pai, Akshay Sadananda Uppinakudru, xfj310, xfj310, Darkner, Sune, Mysling, P., Jørgensen, D. R., Dam, E. B., Lillholm, Martin, Oh, J., Chen, G., Suhy, J., Sporring, Jon & Nielsen, Mads, 2013, 2013 IEEE 10th International Symposium on Biomedical Imaging. IEEE, s. 402-405 4 s.

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  23. Udgivet
  24. Udgivet

    Deformation-based atrophy computation by surface propagation and its application to Alzheimer’s disease

    Pai, Akshay Sadananda Uppinakudru, Sporring, Jon, Darkner, Sune, Dam, Erik Bjørnager, Lillholm, Martin, Jørgensen, D., Oh, J., Chen, G., Suhy, J., xfj310, xfj310 & Nielsen, Mads, 2016, I : SPIE Journal of Medical Imaging. 3, 1, 11 s., 014005.

    Publikation: Bidrag til tidsskriftTidsskriftartikelForskningfagfællebedømt

  25. Udgivet

    A statistical model for simultaneous template estimation, bias correction, and registration of 3D brain images

    Pai, Akshay Sadananda Uppinakudru, Sommer, Stefan Horst, Raket, L. L., Kühnel, Line, Darkner, Sune, xfj310, xfj310 & Nielsen, Mads, 2017, Medical Computer Vision and Bayesian and Graphical Models for Biomedical Imaging: MICCAI 2016 International Workshops, MCV and BAMBI, Athens, Greece, October 21, 2016, Revised Selected Papers. Müller, H., Kelm, B. M., Arbel, T., Cai, W., Cardoso, M. J., Langs, G., Menze, B., Metaxas, D., Montillo, A., Wells, W. M., Zhang, S., Chung, A. C. S., Jenkinson, M. & Ribbens, A. (red.). Springer, s. 151-159 9 s. (Lecture notes in computer science, Bind 10081).

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  26. Udgivet

    Adaptive time-stepping in dieomorphic image registration with bounded inverse consistency error

    Pai, Akshay Sadananda Uppinakudru, Klein, S., Sommer, Stefan Horst, xfj310, xfj310, Darkner, Sune, Sporring, Jon & Nielsen, Mads, 2015, Proceedings of the fifth international workshop on Mathematical Foundations of Computational Anatomy (MFCA 2015) . INRIA, s. 35-47

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  27. Udgivet
  28. Udgivet

    Adaptive time-stepping in diffeomorphic image registration with bounded inverse consistency error

    Pai, Akshay Sadananda Uppinakudru, Klein, S., Sommer, Stefan Horst, xfj310, xfj310, Darkner, Sune, Sporring, Jon & Nielsen, Mads, 2015, The 18th International Conference on Medical Image Computing and Computer Assisted Intervention: proceedings. Technische Universität München , s. 35-47 13 s.

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  29. Udgivet
  30. Udgivet

    Localized cerebral atrophy acceleration during Alzheimer’s disease

    Pai, Akshay Sadananda Uppinakudru, xfj310, xfj310, Darkner, Sune, Lillholm, Martin, Dam, E. B., Sporring, Jon & Nielsen, Mads, 2013, I : Alzheimer's & Dementia. 9, 4, Supplement, s. P36–P37 2 s., IC-P-059.

    Publikation: Bidrag til tidsskriftKonferenceabstrakt i tidsskriftForskningfagfællebedømt

  31. Udgivet

    Hippocampus atrophy in early Alzheimer's disease quantified using non-rigid registration with cube propagation

    Pai, Akshay Sadananda Uppinakudru, xfj310, xfj310, Mysling, P., Erleben, L. L., Sporring, Jon, Dam, E., Lillholm, M., Jørgensen, D. R., Chen, G., Oh, J., Suhy, J. & Nielsen, Mads, 2013.

    Publikation: KonferencebidragKonferenceabstrakt til konferenceForskningfagfællebedømt

  32. Integrated SO-MZI for pattern effect free amplification

    Patent, E. A., Tol, J. V. D., Nielsen, Mads, Binsma, J., Oei, Y., Mørk, J. & Smit, M., 2005, I : I E E E Electron Device Letters. 41, 4, s. 51-52 2 s.

    Publikation: Bidrag til tidsskriftTidsskriftartikelForskningfagfællebedømt

  33. Computing optic flow by scale-space integration of normal flow

    Pedersen, K. S. & Nielsen, Mads, 2006, I : Scale-Space and Morphology in Computer Vision: Third International Conference, Scale-Space 2001 Vancouver, Canada, July 7--8, 2001 Proceedings. s. 14-25 12 s.

    Publikation: Bidrag til tidsskriftTidsskriftartikelForskningfagfællebedømt

  34. The hausdorff dimension and scale-space normalization of natural images

    Pedersen, K. S. & Nielsen, Mads, 2000, I : Journal of Visual Communication and Image Representation. 11, 2, s. 266-277 12 s.

    Publikation: Bidrag til tidsskriftTidsskriftartikelForskningfagfællebedømt

  35. Udgivet

    Computing Optic Flow by Scale-Space Integration of Normal Flow

    Pedersen, Kim Steenstrup & Nielsen, Mads, 2001, Proceedings of DSAGM'01, Den 10. Danske Konference om Mønstergenkendelse og Billedanalyse. s. 124-135 (DIKU teknisk rapport; Nr. 01-04).

    Publikation: Bidrag til bog/antologi/rapportKonferenceabstrakt i proceedingsForskning

  36. On α kernels, Lévy processes, and natural image statistics

    Pedersen, K. S., Duits, R. & Nielsen, Mads, 2005, Scale Space and PDE Methods in Computer Vision. Springer Science+Business Media, s. 468-479 12 s.

    Publikation: Bidrag til bog/antologi/rapportBidrag til bog/antologiForskningfagfællebedømt

  37. Udgivet

    The Hausdorff Dimension and Scale-Space Normalization of 'Natural Images'

    Pedersen, Kim Steenstrup & Nielsen, Mads, 1999.

    Publikation: KonferencebidragKonferenceabstrakt til konferenceForskning

  38. Udgivet

    Mathematical methods for medical imaging

    Pennec, X., Joshi, S. & Nielsen, Mads, 2013, I : International Journal of Computer Vision. 105, 2, s. 109-110 2 s.

    Publikation: Bidrag til tidsskriftLederForskning

  39. Udgivet

    Proceedings of the Fourth International Workshop on Mathematical Foundations of Computational Anatomy - Geometrical and Statistical Methods for Biological Shape Variability Modeling (MFCA 2013), Nagoya, Japan

    Pennec, X. (red.), Joshi, S. (red.), Nielsen, Mads (red.), Fletcher, T. P. (red.), Durrleman, S. (red.) & Sommer, Stefan Horst (red.), 2013, INRIA. 134 s.

    Publikation: Bog/antologi/afhandling/rapportBogForskningfagfællebedømt

  40. Udgivet

    Proceedings of the Third International Workshop on Mathematical Foundations of Computational Anatomy: geometrical and statistical methods for modelling biological shape variability

    Pennec, X. (red.), Joshi, S. (red.) & Nielsen, Mads (red.), 2011, HAL. 200 s.

    Publikation: Bog/antologi/afhandling/rapportBogForskningfagfællebedømt

  41. Udgivet

    Proceedings of the fifth international workshop on Mathematical Foundations of Computational Anatomy (MFCA 2015)

    Pennec, X. (red.), Joshi, S. (red.), Nielsen, Mads (red.), Fletcher, T. P. (red.), Durrleman, S. (red.) & Sommer, Stefan Horst (red.), 2015, INRIA. 173 s.

    Publikation: Bog/antologi/afhandling/rapportAntologiForskning

  42. Udgivet

    Longitudinal analysis of airways using registration

    Petersen, Jens, Gorbunova, V., Nielsen, Mads, Dirksen, A., Lo, P. C. P. & de Bruijne, Marleen, 2011, The Fourth International Workshop on Pulmonary Image Analysis. Beichel, R., de Bruijne, M., van Ginneken, B., Kabus, S., Kiraly, A., Kuhnigk, J-M., McClelland, J., Mori, K., van Rikxoort, E. & Rit, S. (red.). CreateSpace Independent Publishing Platform , s. 11-22 12 s.

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  43. Udgivet

    Optimal graph based segmentation using flow lines with application to airway wall segmentation

    Petersen, Jens, Nielsen, Mads, Lo, P. C. P., Saghir, Z., Dirksen, A. & de Bruijne, Marleen, 2011, Information Processing in Medical Imaging: 22nd International Conference, IPMI 2011, Kloster Irsee, Germany, July 3-8, 2011. Proceedings. Székely, G. & Hahn, H. K. (red.). Springer, s. 49-60 12 s. (Lecture notes in computer science, Bind 6801).

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  44. Udgivet

    Optimal surface segmentation using flow lines to quantify airway abnormalities in chronic obstructive pulmonary disease

    Petersen, Jens, Nielsen, Mads, Lo, P. C. P., Nordenmark, L. H., Pedersen, J. J. H., Wille, M. M. W., Dirksen, A. & de Bruijne, Marleen, 2014, I : Medical Image Analysis. 18, 3, s. 531-541 11 s.

    Publikation: Bidrag til tidsskriftTidsskriftartikelForskningfagfællebedømt

  45. Udgivet

    Effect of inspiration on airway dimensions measured in maximal inspiration CT images of subjects without airflow limitation

    Petersen, Jens, Wille, M. M. W., Raket, L. L., Feragen, Aasa, Pedersen, J. H., Nielsen, Mads, Dirksen, A. & de Bruijne, Marleen, 2014, I : European Radiology. 24, 9, s. 2319-2325 7 s.

    Publikation: Bidrag til tidsskriftTidsskriftartikelForskningfagfællebedømt

  46. Udgivet

    Quantitative analysis of airway abnormalities in CT

    Petersen, Jens, Lo, P. C. P., Nielsen, Mads, Edula, G., Ashraf, H., Dirksen, A. & de Bruijne, Marleen, 2010, Medical Imaging 2010: computer-aided Diagnosis. Karssemeijer, N. & Summers, R. M. (red.). SPIE - International Society for Optical Engineering, 12 s. 76241S. (Progress in Biomedical Optics and Imaging; Nr. 34, Bind 11).

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  47. Udgivet

    Increasing Accuracy of Optimal Surfaces Using Min-marginal Energies

    Petersen, Jens, Arias-Lorza, A. M., Selvan, Raghav, Bos, D., van der Lugt, A., Pedersen, J. H., Nielsen, Mads & de Bruijne, Marleen, 1 jan. 2019, I : IEEE transactions on medical imaging. 38, 7, s. 1559-1568 8599009.

    Publikation: Bidrag til tidsskriftTidsskriftartikelForskningfagfællebedømt

  48. Fully automatic estimation of film-based breast percentage density separate out postmenopausal hormone replacement treatment effects as well as expert's estimation

    Petersen, K., Chernoff, K., Karemore, G. R., Christiansen, C. & Nielsen, Mads, 2012, I : European Journal of Cancer. 48, Supplement 1, s. S145 1 s., 351.

    Publikation: Bidrag til tidsskriftKonferenceabstrakt i tidsskriftForskningfagfællebedømt

  49. Udgivet

    A static SMC sampler on shapes for the automated segmentation of aortic calcifications

    Petersen, P. K., Nielsen, Mads & Brandt, S. S., 2010, Computer Vision – ECCV 2010: 11th European Conference on Computer Vision, Heraklion, Crete, Greece, September 5-11, 2010, Proceedings, Part IV. Daniilidis, K., Maragos, P. & Paragios, N. (red.). Springer, s. 666-679 14 s. (Lecture notes in computer science, Bind 6314).

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  50. Udgivet

    Conditional point distribution models

    Petersen, P. K., Nielsen, Mads & Brandt, S. S., 2011, Medical Computer Vision. Recognition Techniques and Applications in Medical Imaging: International MICCAI Workshop, MCV 2010, Beijing, China, September 20, 2010, Revised Selected Papers. Menze, B., Langs, G., Tu, Z. & Criminisi, A. (red.). Springer, s. 1-10 10 s. (Lecture notes in computer science, Bind 6533).

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

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