Mads Nielsen

Mads Nielsen

Professor


  1. 2020
  2. Udgivet

    Lung Segmentation from Chest X-rays using Variational Data Imputation

    Selvan, Raghav, Dam, Erik Bjørnager, Rischel, S., Sheng, K., Nielsen, Mads & Pai, Akshay Sadananda Uppinakudru, 20 maj 2020, I : arXiv.

    Publikation: Bidrag til tidsskriftTidsskriftartikel

  3. E-pub ahead of print

    Chronic Obstructive Pulmonary Disease Quantification Using CT Texture Analysis and Densitometry: Results From the Danish Lung Cancer Screening Trial

    Sørensen, L., Nielsen, Mads, Petersen, Jens, Pedersen, J. H., Dirksen, A. & de Bruijne, Marleen, 7 apr. 2020, I : American Journal of Roentgenology. s. 1-11 11 s.

    Publikation: Bidrag til tidsskriftTidsskriftartikel

  4. 2019
  5. Udgivet

    The value of hippocampal volume, shape, and texture for 11-year prediction of dementia: a population-based study

    Achterberg, H. C., xfj310, xfj310, Wolters, F. J., Niessen, W. J., Vernooij, M. W., Ikram, M. A., Nielsen, Mads & de Bruijne, Marleen, 2019, I : Neurobiology of Aging. 81, s. 58-66

    Publikation: Bidrag til tidsskriftTidsskriftartikel

  6. Udgivet

    Measurement challenge: protocol for international case–control comparison of mammographic measures that predict breast cancer risk

    Dench, E., Bond-smith, D., Darcey, E., Lee, G., Aung, Y. K., Chan, A., Cuzick, J., Ding, Z. Y., Evans, C. F., Harvey, J., Highnam, R., Hsieh, M., Kontos, D., Li, S., Mariapun, S., Nickson, C., Nguyen, T. L., Pertuz, S., Procopio, P., Rajaram, N., Repich, K., Tan, M., Teo, S., Trinh, N. H., Ursin, G., Wang, C., Dos-santos-silva, I., Mccormack, V., Nielsen, Mads, Shepherd, J., Hopper, J. L. & Stone, J., 2019, I : BMJ Open. 9, 12, s. 1-6 e031041.

    Publikation: Bidrag til tidsskriftTidsskriftartikel

  7. Udgivet

    MRI Biomarkers Improve Disease Progression Modeling-Based Prediction of Cognitive Decline

    Mehdipour Ghazi, M., Nielsen, Mads, Pai, Akshay Sadananda Uppinakudru, Modat , M., Cardoso , J., Ourselin, S. & xfj310, xfj310, 2019. 1 s.

    Publikation: KonferencebidragKonferenceabstrakt til konferenceForskning

  8. Udgivet

    On the initialization of long short-term memory networks

    Mehdipour Ghazi, M., Nielsen, Mads, Pai, Akshay Sadananda Uppinakudru, Modat, M., Cardoso, M. J., Ourselin, S. & xfj310, xfj310, 2019, Neural Information Processing - 26th International Conference, ICONIP 2019, Proceedings. Gedeon, T., Wong, K. W. & Lee, M. (red.). Springer VS, s. 275-286 12 s. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), Bind 11953 LNCS).

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  9. Udgivet

    Training recurrent neural networks robust to incomplete data: application to Alzheimer’s disease progression modeling

    Mehdipour Ghazi, M., Nielsen, Mads, Pai, Akshay Sadananda Uppinakudru, Cardoso, M. J., Modat, M., Ourselin, S. & xfj310, xfj310, 2019, I : Medical Image Analysis. 53, s. 39-46

    Publikation: Bidrag til tidsskriftTidsskriftartikel

  10. Udgivet

    Change in mammographic density across birth cohorts of Dutch breast cancer screening participants

    Napolitano, George, Lynge, Elsebeth, Lillholm, Martin, Vejborg, I. M. M., van Gils, C. H., Nielsen, Mads & Karssemeijer, N., 2019, I : International Journal of Cancer. 145, 11, s. 2954-2962 9 s.

    Publikation: Bidrag til tidsskriftTidsskriftartikel

  11. Udgivet

    Knowledge Distillation for Semi-supervised Domain Adaptation

    Orbes-Arteaga, M., Cardoso, J., xfj310, xfj310, Igel, Christian, Ourselin, S., Modat, M., Nielsen, Mads & Pai, Akshay Sadananda Uppinakudru, 1 jan. 2019, OR 2.0 Context-Aware Operating Theaters and Machine Learning in Clinical Neuroimaging - 2nd International Workshop, OR 2.0 2019, and 2nd International Workshop, MLCN 2019, Held in Conjunction with MICCAI 2019, Proceedings. Zhou, L., Sarikaya, D., Kia, S. M., Speidel, S., Malpani, A., Hashimoto, D., Habes, M., Löfstedt, T., Ritter, K. & Wang, H. (red.). Springer VS, s. 68-76 9 s. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), Bind 11796 LNCS).

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  12. Udgivet

    Multi-domain adaptation in brain MRI through paired consistency and adversarial learning

    Orbes-Arteaga, M., Varsavsky, T., Sudre, C. H., Eaton-Rosen, Z., Haddow, L. J., xfj310, xfj310, Nielsen, Mads, Pai, Akshay Sadananda Uppinakudru, Ourselin, S., Modat, M., Nachev, P. & Cardoso, M. J., 2019, Domain Adaptation and Representation Transfer and Medical Image Learning with Less Labels and Imperfect Data First MICCAI Workshop, DART 2019 and First International Workshop, MIL3ID 2019 Shenzhen, Held in Conjunction with MICCAI 2019 Shenzhen, 2019 Proceedings. Wang, Q., Milletari, F., Rieke, N., Nguyen, H. V., Roysam, B., Albarqouni, S., Cardoso, M. J., Xu, Z., Kamnitsas, K., Patel, V., Jiang, S., Zhou, K., Luu, K. & Le, N. (red.). Springer VS, s. 54-62 9 s. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), Bind 11795 LNCS).

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  13. Udgivet

    PADDIT: Probabilistic Augmentation of Data using Diffeomorphic Image Transformation

    Orbes-Arteaga, M., xfj310, xfj310, Cardoso , J., Modat , M., Ourselin, S., Sommer, Stefan Horst, Nielsen, Mads, Igel, Christian & Pai, Akshay Sadananda Uppinakudru, 2019, Proceedings, SPIE 10949, Medical Imaging 2019: Image Processing . SPIE - International Society for Optical Engineering, 6 s.

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  14. Udgivet

    Increasing Accuracy of Optimal Surfaces Using Min-marginal Energies

    Petersen, Jens, Arias-Lorza, A. M., Selvan, Raghav, Bos, D., van der Lugt, A., Pedersen, J. H., Nielsen, Mads & de Bruijne, Marleen, 1 jan. 2019, I : IEEE transactions on medical imaging. 38, 7, s. 1559-1568 8599009.

    Publikation: Bidrag til tidsskriftTidsskriftartikel

  15. Udgivet

    UNSUPERVISED MACHINE LEARNING ON BASELINE BRAIN MRI IDENTIFIES MCI SUBGROUP WITH A FASTER DECLINE OVER TWO YEARS COMPARED TO CLASSICAL HIPPOCAMPAL SPARING AD SUBTYPE

    xfj310, xfj310, Pai, Akshay Sadananda Uppinakudru, Nielsen, Mads, Leverenz, J. B. & Pillai, J. A., 2019, I : Alzheimer's & Dementia. 15, 7, s. P1420 1 s., P4-326.

    Publikation: Bidrag til tidsskriftKonferenceabstrakt i tidsskrift

  16. Udgivet
  17. 2018
  18. Udgivet

    Robust training of recurrent neural networks to handle missing data for disease progression modeling

    Mehdipour Ghazi, M., Nielsen, Mads, Pai, Akshay Sadananda Uppinakudru, Cardoso, M. J., Modat, M., Ourselin, S. & xfj310, xfj310, 2018. 9 s.

    Publikation: KonferencebidragPaperForskning

  19. Udgivet

    Simultaneous synthesis of FLAIR and segmentation of white matter hypointensities from T1 MRIs

    Orbes-Arteaga, M., Cardoso, M. J., xfj310, xfj310, Modat, M., Ourselin, S., Nielsen, Mads & Pai, Akshay Sadananda Uppinakudru, 2018. 8 s.

    Publikation: KonferencebidragPaperForskning

  20. Udgivet

    Subclinical depressive symptoms during late midlife and structural brain alterations: A longitudinal study of Danish men born in 1953

    Osler, Merete, xfj310, xfj310, Rozing, M., Calvo, O. P., Nielsen, Mads & Rostrup, E., apr. 2018, I : Human Brain Mapping. 39, 4, s. 1789-1795

    Publikation: Bidrag til tidsskriftTidsskriftartikel

  21. Udgivet

    Ensemble support vector machine classification of dementia using structural MRI and mini-mental state examination

    xfj310, xfj310 & Nielsen, Mads, 2018, I : Journal of Neuroscience Methods. 302, SI, s. 66-74

    Publikation: Bidrag til tidsskriftTidsskriftartikel

  22. Udgivet

    The combined effect of mammographic texture and density on breast cancer risk: a cohort study

    Wanders, J. O. P., van Gils, C. H., Karssemeijer, N., Holland, K., Kallenberg, M., Peeters, P. H. M., Nielsen, Mads & Lillholm, Martin, 2018, I : Breast Cancer Research. 20, 10 s., 36.

    Publikation: Bidrag til tidsskriftTidsskriftartikel

  23. Udgivet

    Screening mammography: benefit of double reading by breast density

    von Euler-Chelpin, My Catarina, Lillholm, Martin, Napolitano, George, Vejborg, I., Nielsen, Mads & Lynge, Elsebeth, 2018, I : Breast Cancer Research and Treatment. 171, 3, s. 767-776 10 s.

    Publikation: Bidrag til tidsskriftTidsskriftartikel

  24. 2017
  25. Udgivet

    Graphs in Biomedical Image Analysis, Computational Anatomy and Imaging Genetics: First International Workshop, GRAIL 2017, 6th International Workshop, MFCA 2017, and Third International Workshop, MICGen 2017, Held in Conjunction with MICCAI 2017, Québec City, QC, Canada, September 10–14, 2017, Proceedings

    Cardoso, M. J. (red.), Arbel, T. (red.), Ferrante, E. (red.), Pennec, X. (red.), Dalca, A. V., Parisot, S. (red.), Joshi, S. (red.), Batmanghelich, N. K. (red.), Sotiras, A. (red.), Nielsen, Mads (red.), Sabuncu, M. R. (red.), Fletcher, T. (red.), Shen, L. (red.), Durrleman, S. (red.) & Sommer, Stefan Horst (red.), 2017, Springer. 248 s. (Lecture notes in computer science, Bind 10551).

    Publikation: Bog/antologi/afhandling/rapportAntologiForskningfagfællebedømt

  26. Udgivet

    Density-based non-rigid registration of diffusion-weighted images

    Jensen, H. G., Lauze, Francois Bernard, Nielsen, Mads & Darkner, Sune, apr. 2017.

    Publikation: KonferencebidragKonferenceabstrakt til konferenceForskningfagfællebedømt

  27. Udgivet

    Convolutional neural networks for segmentation and object detection of human semen

    Nissen, M. S., Krause, Oswin, Almstrup, K., Kjærulff, S., Nielsen, T. T. & Nielsen, Mads, 2017, Image Analysis: 20th Scandinavian Conference, SCIA 2017, Tromsø, Norway, June 12–14, 2017, Proceedings, Part I. Sharma, P. & Bianchi, F. M. (red.). Springer, Bind Part 1. s. 397-406 10 s. (Lecture notes in computer science, Bind 10269).

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  28. Udgivet

    A statistical model for simultaneous template estimation, bias correction, and registration of 3D brain images

    Pai, Akshay Sadananda Uppinakudru, Sommer, Stefan Horst, Raket, L. L., Kühnel, Line, Darkner, Sune, xfj310, xfj310 & Nielsen, Mads, 2017, Medical Computer Vision and Bayesian and Graphical Models for Biomedical Imaging: MICCAI 2016 International Workshops, MCV and BAMBI, Athens, Greece, October 21, 2016, Revised Selected Papers. Müller, H., Kelm, B. M., Arbel, T., Cai, W., Cardoso, M. J., Langs, G., Menze, B., Metaxas, D., Montillo, A., Wells, W. M., Zhang, S., Chung, A. C. S., Jenkinson, M. & Ribbens, A. (red.). Springer, s. 151-159 9 s. (Lecture notes in computer science, Bind 10081).

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  29. Udgivet

    Characterization of errors in deep learning-based brain MRI segmentation

    Pai, Akshay Sadananda Uppinakudru, Teng, Y., Blair, Joseph Patrick Michele, Kallenberg, M. G. J., Dam, Erik Bjørnager, Sommer, Stefan Horst, Igel, Christian & Nielsen, Mads, 2017, Deep learning for medical image analysis. Zhou, S. K., Greenspan, H. & Shen, D. (red.). Academic Press, s. 223–242 20 s.

    Publikation: Bidrag til bog/antologi/rapportBidrag til bog/antologiForskningfagfællebedømt

  30. Udgivet

    Hippocampal texture predicts rate of cognitive decline in mild cognitive impairment

    Pai, Akshay Sadananda Uppinakudru, Pillai, J. A., xfj310, xfj310, Darkner, Sune, Sommer, Stefan Horst & Nielsen, Mads, jul. 2017, I : Alzheimer's & Dementia. 13, 7, supplement, s. P1356 1 s., P4-225.

    Publikation: Bidrag til tidsskriftKonferenceabstrakt i tidsskrift

  31. Udgivet
  32. Udgivet

    Risk stratification of women with false-positive test results in mammography screening based on mammographic morphology and density: a case control study

    Winkel, R. R., von Euler-Chelpin, My Catarina, Lynge, Elsebeth, Diao, Pengfei, Lillholm, Martin, Kallenberg, M., Forman, Julie Lyng, Nielsen, Michael Bachmann, Uldall, W. Y., Nielsen, Mads & Vejborg, I. M. M., aug. 2017, I : Cancer Epidemiology. 49, s. 53-60 8 s.

    Publikation: Bidrag til tidsskriftTidsskriftartikel

  33. 2016
  34. Udgivet

    Learning density independent texture features

    Kallenberg, M. G. J., Nielsen, Mads, Holland, K., Karssemeijer, N., Igel, Christian & Lillholm, Martin, 2016, Breast Imaging: 13th International Workshop, IWDM 2016, Malmö, Sweden, June 19-22, 2016, Proceedings. Tingberg, A., Lång, K. & Timberg, P. (red.). Springer, s. 299-306 8 s. (Lecture notes in computer science, Bind 9699).

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  35. Udgivet

    Unsupervised deep learning applied to breast density segmentation and mammographic risk scoring

    Kallenberg, M. G. J., Petersen, P. K., Nielsen, Mads, Ng, A. Y., Diao, Pengfei, Igel, Christian, Vachon, C. M., Holland, K., Winkel, R. R., Karssemeijer, N. & Lillholm, Martin, 2016, I : IEEE Transactions on Medical Imaging. 35, 5, s. 1322-1331 10 s.

    Publikation: Bidrag til tidsskriftTidsskriftartikel

  36. Udgivet

    Supervised hub-detection for brain connectivity

    Kasenburg, N., Liptrot, M. G., Reislev, N. L., Garde, E., Nielsen, Mads & Feragen, Aasa, 2016, Medical Imaging 2016: Image Processing. Styner, M. A. & Angelini, E. D. (red.). SPIE - International Society for Optical Engineering, 9 s. 978409. (Progress in Biomedical Optics and Imaging; Nr. 39, Bind 17).

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  37. Udgivet

    Training shortest-path tractography: automatic learning of spatial priors

    Kasenburg, N., Liptrot, M. G., Reislev, N. L., Ørting, Silas Nyboe, Nielsen, Mads, Garde, E. & Feragen, Aasa, 2016, I : NeuroImage. 130, s. 63-76 14 s.

    Publikation: Bidrag til tidsskriftTidsskriftartikel

  38. Udgivet

    Combining the boundary shift integral and tensor-based morphometry for brain atrophy estimation

    Michalkiewicz, M. D., Pai, Akshay Sadananda Uppinakudru, Leung, K. K., Sommer, Stefan Horst, Darkner, Sune, xfj310, xfj310, Sporring, Jon & Nielsen, Mads, 2016, Medical imaging 2016: Image processing. Styner, M. A. & Angelini, E. D. (red.). SPIE - International Society for Optical Engineering, 6 s. 978406. (Progress in Biomedical Optics and Imaging).

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  39. Udgivet

    Deformation-based atrophy computation by surface propagation and its application to Alzheimer’s disease

    Pai, Akshay Sadananda Uppinakudru, Sporring, Jon, Darkner, Sune, Dam, Erik Bjørnager, Lillholm, Martin, Jørgensen, D., Oh, J., Chen, G., Suhy, J., xfj310, xfj310 & Nielsen, Mads, 2016, I : SPIE Journal of Medical Imaging. 3, 1, 11 s., 014005.

    Publikation: Bidrag til tidsskriftTidsskriftartikel

  40. Udgivet

    Do dementia biomarkers have a sigmoid trajectory? Insights from non-linear mixed effects modeling

    Pai, Akshay Sadananda Uppinakudru, Sommer, Stefan Horst, Raket, L. L., xfj310, xfj310 & Nielsen, Mads, 2016, I : Alzheimer's & Dementia. 12, 7, Supplement, s. P356 1 s., O4-09-06.

    Publikation: Bidrag til tidsskriftKonferenceabstrakt i tidsskrift

  41. Udgivet
  42. Udgivet

    Early detection of Alzheimer's disease using MRI hippocampal texture

    xfj310, xfj310, Igel, Christian, Hansen, N. L., Osler, Merete, Lauritzen, Martin, Rostrup, E. & Nielsen, Mads, 2016, I : Human Brain Mapping. 37, 3, s. 1148-1161 14 s.

    Publikation: Bidrag til tidsskriftTidsskriftartikel

  43. Udgivet

    MCI trial enrichment using MRI hippocampus texture

    xfj310, xfj310, Igel, Christian & Nielsen, Mads, 2016, I : Alzheimer's & Dementia. 12, 7, Supplement, s. P108–P109 2 s., IC-P-146.

    Publikation: Bidrag til tidsskriftKonferenceabstrakt i tidsskrift

  44. Udgivet
  45. 2015
  46. Udgivet

    Standardized evaluation of algorithms for computer-aided diagnosis of dementia based on structural MRI: The CADDementia challenge

    Bron, E. E., Smits, M., van der Flier, W. M., Vrenken, H., Barkhof, F., Scheltens, P., Papma, J. M., Steketee, R. M. E., Méndez Orellana, C., Meijboom, R., Pinto, M., Meireles, J. R., Garrett, C., Bastos-Leite, A. J., Abdulkadir, A., Ronneberger, O., Amoroso, N., Bellotti, R., Cárdenas-Peña, D., Álvarez-Meza, A. M., Dolph, C. V., Iftekharuddin, K. M., Eskildsen, S. F., Coupé, P., Fonov, V. S., Franke, K., Gaser, C., Ledig, C., Guerrero, R., Tong, T., Gray, K. R., Moradi, E., Tohka, J., Routier, A., Durrleman, S., Sarica, A., Di Fatta, G., Sensi, F., Chincarini, A., Smith, G. M., Stoyanov, Z. V., xfj310, xfj310, Nielsen, Mads, Tangaro, S., Inglese, P., Wachinger, C., Reuter, M., van Swieten, J. C., Niessen, W. J. & Klein, S., 2015, I : NeuroImage. 111, s. 562-579 18 s.

    Publikation: Bidrag til tidsskriftTidsskriftartikel

  47. Udgivet

    Automatic segmentation of high-and low-field knee MRIs using knee image quantification with data from the osteoarthritis initiative

    Dam, Erik Bjørnager, Lillholm, Martin, Marques, J. & Nielsen, Mads, 2015, I : SPIE Journal of Medical Imaging. 2, 2, 13 s., 024001.

    Publikation: Bidrag til tidsskriftTidsskriftartikel

  48. Udgivet

    Locally orderless registration for diffusion weighted images

    Jensen, H. G., Lauze, Francois Bernard, Nielsen, Mads & Darkner, Sune, 2015, Medical Image Computing and Computer-Assisted Intervention -- MICCAI 2015: 18th international conference, Munich, Germany, October 5-9, 2015, Proceedings, Part II. Navab, N., Hornegger, J., Wells, W. M. & Frangi, A. F. (red.). Springer, s. 305-312 8 s. (Lecture notes in computer science, Bind 9350).

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  49. Udgivet

    Multimodal brain extraction from structural MRI using co-registered FDG-PET

    Jensen, H. G., Federspiel, F. V. K., Ptito, M., Nielsen, Mads, Gjedde, Albert, Keller, S. H., Law, Ian, Kupers, Ron & Darkner, Sune, 2015. 12 s.

    Publikation: KonferencebidragPaperForskning

  50. Udgivet

    Assessing breast cancer masking risk in full field digital mammography with automated texture analysis

    Kallenberg, M. G. J., Lillholm, Martin, Diao, Pengfei, Holland, K., Karssemeijer, N., Igel, Christian & Nielsen, Mads, 2015, 7th International Workshop on Breast Densitometry and Cancer Risk Assessment (Non-CME). University of California, s. 109 1 s.

    Publikation: Bidrag til bog/antologi/rapportKonferenceabstrakt i proceedingsForskningfagfællebedømt

  51. Udgivet

    Assessing breast cancer masking risk with automated texture analysis in full field digital mammography

    Kallenberg, M. G. J., Lillholm, Martin, Diao, Pengfei, Petersen, K., Holland, K., Karssemeijer, N., Igel, Christian & Nielsen, Mads, 2015, Breast Imaging and Interventional. Radiological Society of North America, Inc, s. 218 1 s.

    Publikation: Bidrag til bog/antologi/rapportKonferenceabstrakt i proceedingsForskningfagfællebedømt

  52. Udgivet

    Automated texture scoring for assessing breast cancer masking risk in full field digital mammography

    Kallenberg, M. G. J., Petersen, P. K., Lillholm, Martin, Jørgensen, D. R., Diao, Pengfei, Holland, K., Karssemeijer, N., Igel, Christian & Nielsen, Mads, 2015, I : Insights into Imaging. 6, 1, Supplement, 1 s., B-0212.

    Publikation: Bidrag til tidsskriftKonferenceabstrakt i tidsskrift

  53. Udgivet

    Hippocampal texture predicts ad conversion in amyloid positive mild cognitively impaired subjects

    Nielsen, Mads, Igel, Christian & xfj310, xfj310, 2015, I : Neurodegenerative Diseases. 15, Suppl. 1, s. 262 1 s., ADPD5-0947.

    Publikation: Bidrag til tidsskriftKonferenceabstrakt i tidsskrift

  54. Udgivet
  55. Udgivet

    Relevance sampling

    Nielsen, Mads, Markussen, Bo & Loog, M., 2015, Proceedings of the Eight Workshop on Information Theoretic Methods in Science and Engineering. Rissanen, J., Harremoës, P., Forchhammer, S., Roos, T. & Myllymäki, P. (red.). Department of Computer Science, University of Helsinki , s. 35-38 4 s. (Series of Publications B, Bind B-2015-1).

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  56. Udgivet

    Adaptive time-stepping in dieomorphic image registration with bounded inverse consistency error

    Pai, Akshay Sadananda Uppinakudru, Klein, S., Sommer, Stefan Horst, xfj310, xfj310, Darkner, Sune, Sporring, Jon & Nielsen, Mads, 2015, Proceedings of the fifth international workshop on Mathematical Foundations of Computational Anatomy (MFCA 2015) . INRIA, s. 35-47

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  57. Udgivet

    Adaptive time-stepping in diffeomorphic image registration with bounded inverse consistency error

    Pai, Akshay Sadananda Uppinakudru, Klein, S., Sommer, Stefan Horst, xfj310, xfj310, Darkner, Sune, Sporring, Jon & Nielsen, Mads, 2015, The 18th International Conference on Medical Image Computing and Computer Assisted Intervention: proceedings. Technische Universität München , s. 35-47 13 s.

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  58. Udgivet
  59. Udgivet

    Diffeomorphic image registration with automatic time-step adjustment

    Pai, Akshay Sadananda Uppinakudru, Klein, S., Sommer, Stefan Horst, Darkner, Sune, Sporring, Jon & Nielsen, Mads, 2015, Biomedical Imaging (ISBI), 2015 IEEE 12th International Symposium on. IEEE, s. 1085-1088 4 s.

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  60. Udgivet
  61. Udgivet

    Proceedings of the fifth international workshop on Mathematical Foundations of Computational Anatomy (MFCA 2015)

    Pennec, X. (red.), Joshi, S. (red.), Nielsen, Mads (red.), Fletcher, T. P. (red.), Durrleman, S. (red.) & Sommer, Stefan Horst (red.), 2015, INRIA. 173 s.

    Publikation: Bog/antologi/afhandling/rapportAntologiForskning

  62. Udgivet

    Hippocampal MRI texture is related to hippocampal glucose metabolism

    xfj310, xfj310, Pai, Akshay Sadananda Uppinakudru, Igel, Christian & Nielsen, Mads, 2015, I : Alzheimer's & Dementia. 11, 7, Supplement, s. P55-P56 2 s., IC-P-077.

    Publikation: Bidrag til tidsskriftKonferenceabstrakt i tidsskrift

  63. Udgivet

    Improved Alzheimer's disease diagnostic performance using structural MRI: validation of the MRI combination biomarker that won the CADDementia challenge

    xfj310, xfj310, Lillholm, Martin, Pai, Akshay Sadananda Uppinakudru, Balas, I., Anker, C., Igel, Christian & Nielsen, Mads, 2015, I : Insights into Imaging. 6, Supplement 1, 1 s., B-0077.

    Publikation: Bidrag til tidsskriftKonferenceabstrakt i tidsskrift

  64. Udgivet
  65. 2014
  66. Udgivet

    Alzheimer's disease diagnostic performance of a multi-atlas hippocampal segmentation method using the harmonized hippocampal protocol

    Anker, C., xfj310, xfj310, Pai, Akshay Sadananda Uppinakudru, Lyksborg, M., Lillholm, Martin, Conradsen, K., Larsen, R. & Nielsen, Mads, 2014. 1 s.

    Publikation: KonferencebidragKonferenceabstrakt til konferenceForskningfagfællebedømt

  67. Udgivet

    Automated hippocampal segmentation using new standardized manual segmentations from the harmonized hippocampal protocol

    Anker, C., Pai, Akshay Sadananda Uppinakudru, xfj310, xfj310, Lyksborg, M., Conradsen, K., Larsen, R. & Nielsen, Mads, 2014, I : Alzheimer's & Dementia. 10, 4, Supplement, s. P415-P416 2 s., P1-288.

    Publikation: Bidrag til tidsskriftKonferenceabstrakt i tidsskrift

  68. Udgivet

    Automated hippocampal segmentation using new standardized manual segmentations from the harmonized hippocampal protocol

    Anker, C., Pai, Akshay Sadananda Uppinakudru, xfj310, xfj310, Lyksborg, M., Conradsen, K., Larsen, R. & Nielsen, Mads, 2014, I : Alzheimer's & Dementia. 10, 4, Supplement, s. P33 1 s., IC-P-058.

    Publikation: Bidrag til tidsskriftKonferenceabstrakt i tidsskrift

  69. Udgivet

    Breast tissue segmentation from x-ray radiographs

    Chen, C., Nielsen, Mads, Karssemeijer, N. & Brandt, Sami Sebastian, 2014, I : Physics in Medicine and Biology. 59, 10, s. 2445-2456 12 s.

    Publikation: Bidrag til tidsskriftTidsskriftartikel

  70. Udgivet

    Brain region's relative proximity as marker for Alzheimer's disease based on structural MRI

    Erleben, L. L., xfj310, xfj310, Pai, Akshay Sadananda Uppinakudru, Dam, Erik Bjørnager, Nielsen, Mads & Initiative, A. D. N., 2014, I : BMC Medical Imaging. 14, 1, 12 s., 21.

    Publikation: Bidrag til tidsskriftTidsskriftartikel

  71. Udgivet

    Geometry and statistics: manifolds and stratified spaces

    Feragen, Aasa, Nielsen, Mads, Jensen, E. B. V., Plessis, A. D. & Lauze, Francois Bernard, 2014, I : Journal of Mathematical Imaging and Vision. 50, 1, s. 1-4 4 s.

    Publikation: Bidrag til tidsskriftLeder

  72. Udgivet

    A method to determine the mammographic regions that show early changes due to the development of breast cancer

    Karemore, Gopal, Nielsen, Mads, Karssemeijer, N. & Brandt, Sami Sebastian, 2014, I : Physics in Medicine and Biology. 59, 22, s. 6759-6773 15 s.

    Publikation: Bidrag til tidsskriftTidsskriftartikel

  73. Udgivet

    Graph-based fibre tractography computing shortest paths between regions of interest

    Kasenburg, N., Liptrot, M. G., Borgwardt, K., Ørting, Silas Nyboe, Nielsen, Mads & Feragen, Aasa, 2014. 1 s.

    Publikation: KonferencebidragKonferenceabstrakt til konferenceForskningfagfællebedømt

  74. Udgivet

    Mammographic texture resemblance generalizes as an independent risk factor for breast cancer

    Nielsen, Mads, Vachon, C. M., Scott, C. G., Chernoff, K., Karemore, Gopal, Karssemeijer, N., Lillholm, Martin & Karsdal, M., 2014, I : Breast Cancer Research (Online Edition). 16, 2, 8 s., R37.

    Publikation: Bidrag til tidsskriftTidsskriftartikel

  75. Udgivet
  76. Udgivet
  77. Udgivet

    Stepwise inverse consistent Euler’s scheme for diffeomorphic image registration

    Pai, Akshay Sadananda Uppinakudru, Sommer, Stefan Horst, Darkner, Sune, xfj310, xfj310, Sporring, Jon & Nielsen, Mads, 2014, Biomedical Image Registration: 6th International Workshop, WBIR 2014, London, UK, July 7-8, 2014. Proceedings. Ourselin, S. & Modat, M. (red.). Springer, s. 223-230 8 s. (Lecture notes in computer science, Bind 8545).

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  78. Udgivet

    White matter hypointensity growth rate correlates with rate of brain atrophy

    Pai, Akshay Sadananda Uppinakudru, xfj310, xfj310, Darkner, Sune, Sporring, Jon, Rostrup, E. & Nielsen, Mads, 2014, I : Alzheimer's & Dementia. 10, 4, Supplement, s. P75-P76 2 s., IC-P-131.

    Publikation: Bidrag til tidsskriftKonferenceabstrakt i tidsskrift

  79. Udgivet

    White matter hypointensity growth rate correlates with rate of brain atrophy

    Pai, Akshay Sadananda Uppinakudru, xfj310, xfj310, Darkner, Sune, Sporring, Jon, Rostrup, E. & Nielsen, Mads, 2014, I : Alzheimer's & Dementia. 10, 4, Supplement, s. P414 1 s., P1-285.

    Publikation: Bidrag til tidsskriftKonferenceabstrakt i tidsskrift

  80. Udgivet

    Effect of inspiration on airway dimensions measured in maximal inspiration CT images of subjects without airflow limitation

    Petersen, Jens, Wille, M. M. W., Raket, L. L., Feragen, Aasa, Pedersen, J. H., Nielsen, Mads, Dirksen, A. & de Bruijne, Marleen, 2014, I : European Radiology. 24, 9, s. 2319-2325 7 s.

    Publikation: Bidrag til tidsskriftTidsskriftartikel

  81. Udgivet

    Optimal surface segmentation using flow lines to quantify airway abnormalities in chronic obstructive pulmonary disease

    Petersen, Jens, Nielsen, Mads, Lo, P. C. P., Nordenmark, L. H., Pedersen, J. J. H., Wille, M. M. W., Dirksen, A. & de Bruijne, Marleen, 2014, I : Medical Image Analysis. 18, 3, s. 531-541 11 s.

    Publikation: Bidrag til tidsskriftTidsskriftartikel

  82. Udgivet

    Breast tissue segmentation and mammographic risk scoring using deep learning

    Petersen, P. K., Nielsen, Mads, Diao, Pengfei, Karssemeijer, N. & Lillholm, Martin, 2014, Breast imaging: 12th International Workshop, IWDM 2014, Gifu City, Japan, June 29 – July 2, 2014. Proceedings. Fujita, H., Hara, T. & Muramatsu, C. (red.). Springer Science+Business Media, s. 88-94 7 s. (Lecture notes in computer science, Bind 8539).

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  83. Udgivet

    Persistent hippocampal predominant atrophy in pre dementia as a marker for slower functional decline

    Pillai, J., Pai, Akshay Sadananda Uppinakudru, xfj310, xfj310 & Nielsen, Mads, 2014, I : Alzheimer's & Dementia. 10, 4, Supplement, s. P538-P539 2 s., P2-186.

    Publikation: Bidrag til tidsskriftKonferenceabstrakt i tidsskrift

  84. Udgivet

    Persistent hippocampal predominant atrophy in pre dementia as a marker for slower functional decline

    Pillai, J., Pai, Akshay Sadananda Uppinakudru, xfj310, xfj310 & Nielsen, Mads, 2014, I : Alzheimer's & Dementia. 10, 4, Supplement, s. P34-P35 2 s., IC-P-061.

    Publikation: Bidrag til tidsskriftKonferenceabstrakt i tidsskrift

  85. Udgivet

    Optimization over geodesics for exact principal geodesic analysis

    Sommer, Stefan Horst, Lauze, Francois Bernard & Nielsen, Mads, 2014, I : Advances in Computational Mathematics. 40, 2, s. 283-313 31 s.

    Publikation: Bidrag til tidsskriftTidsskriftartikel

  86. Udgivet

    Dementia diagnosis using MRI cortical thickness, shape, texture, and volumetry

    xfj310, xfj310, Pai, Akshay Sadananda Uppinakudru, Anker, C., Balas, I., Lillholm, Martin, Igel, Christian & Nielsen, Mads, 2014, MICCAI 2014 Workshop Proceedings: Challenge on Computer-Aided Diagnosis of Dementia Based on Structural MRI Data. Bron, E. E., Smits, M., van Swieten, J. C., Niessen, W. J. & Klein, S. (red.). Erasmus Universiteit Rotterdam, s. 111-118 8 s.

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  87. Udgivet

    Validation of hippocampal texture for early Alzheimer’s disease detection: generalization to independent cohorts and extrapolation to very early signs of dementia

    xfj310, xfj310, Igel, Christian, Hansen, N. L., Lauritzen, Martin, Osler, Merete, Rostrup, E. & Nielsen, Mads, 2014, I : Alzheimer's & Dementia. 10, 4, Supplement, s. P133 1 s.

    Publikation: Bidrag til tidsskriftKonferenceabstrakt i tidsskrift

  88. Udgivet

    Simultaneous registration and bilateral differential bias correction in brain MRI

    Zou, B., Pai, Akshay Sadananda Uppinakudru, xfj310, xfj310 & Nielsen, Mads, 2014, Intelligent Imaging: Linking MR Acquisition and Processing.

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  89. 2013
  90. Udgivet

    Morphometric connectivity analysis to distinguish normal, mild cognitive impaired, and Alzheimer subjects based on brain MRI

    Erleben, L. L., xfj310, xfj310, Mysling, P., Pai, Akshay Sadananda Uppinakudru, Dam, E. B. & Nielsen, Mads, 2013, Medical Imaging 2013: image processing . Ourselin, S. & Haynor, D. R. (red.). SPIE - International Society for Optical Engineering, 6 s. 866926. (Progress in Biomedical Optics and Imaging; Nr. 36, Bind 14).

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  91. Udgivet

    Toward a theory of statistical tree-shape analysis

    Feragen, Aasa, Lo, P. C. P., de Bruijne, Marleen, Nielsen, Mads & Lauze, Francois Bernard, 2013, I : I E E E Transactions on Pattern Analysis and Machine Intelligence. 35, 8, s. 2008-2021 14 s.

    Publikation: Bidrag til tidsskriftTidsskriftartikel

  92. Udgivet

    Evaluation of WBAA with registration-based cube propagation for brain atrophy quantification

    Lillholm, Martin, Pai, Akshay Sadananda Uppinakudru, xfj310, xfj310, Nielsen, Mads, Sporring, Jon, Darkner, Sune & Dam, E., 2013. 1 s.

    Publikation: KonferencebidragKonferenceabstrakt til konferenceForskningfagfællebedømt

  93. Udgivet

    A unifying framework for automatic and semi-automatic segmentation of vertebrae from radiographs using sample-driven active shape models

    Mysling, P., Petersen, P. K., Nielsen, Mads & Lillholm, Martin, 2013, I : Machine Vision & Applications. 24, 7, s. 1421–1434 14 s.

    Publikation: Bidrag til tidsskriftTidsskriftartikel

  94. Udgivet

    Cube propagation for focal brain atrophy estimation

    Pai, Akshay Sadananda Uppinakudru, xfj310, xfj310, Darkner, Sune, Mysling, P., Jørgensen, D. R., Dam, E. B., Lillholm, Martin, Oh, J., Chen, G., Suhy, J., Sporring, Jon & Nielsen, Mads, 2013, 2013 IEEE 10th International Symposium on Biomedical Imaging. IEEE, s. 402-405 4 s.

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  95. Udgivet

    Hippocampus atrophy in early Alzheimer's disease quantified using non-rigid registration with cube propagation

    Pai, Akshay Sadananda Uppinakudru, xfj310, xfj310, Mysling, P., Erleben, L. L., Sporring, Jon, Dam, E., Lillholm, M., Jørgensen, D. R., Chen, G., Oh, J., Suhy, J. & Nielsen, Mads, 2013.

    Publikation: KonferencebidragKonferenceabstrakt til konferenceForskningfagfællebedømt

  96. Udgivet

    Localized cerebral atrophy acceleration during Alzheimer’s disease

    Pai, Akshay Sadananda Uppinakudru, xfj310, xfj310, Darkner, Sune, Lillholm, Martin, Dam, E. B., Sporring, Jon & Nielsen, Mads, 2013, I : Alzheimer's & Dementia. 9, 4, Supplement, s. P36–P37 2 s., IC-P-059.

    Publikation: Bidrag til tidsskriftKonferenceabstrakt i tidsskrift

  97. Udgivet

    Localized cerebral atrophy acceleration during Alzheimer’s disease

    Pai, Akshay Sadananda Uppinakudru, xfj310, xfj310, Darkner, Sune, Lillholm, Martin, Dam, E. B., Sporring, Jon & Nielsen, Mads, 2013, I : Alzheimer's & Dementia. 9, 4, Supplement, s. P151 1 s., O1-10-06.

    Publikation: Bidrag til tidsskriftKonferenceabstrakt i tidsskrift

  98. Udgivet

    Mathematical methods for medical imaging

    Pennec, X., Joshi, S. & Nielsen, Mads, 2013, I : International Journal of Computer Vision. 105, 2, s. 109-110 2 s.

    Publikation: Bidrag til tidsskriftLeder

  99. Udgivet

    Proceedings of the Fourth International Workshop on Mathematical Foundations of Computational Anatomy - Geometrical and Statistical Methods for Biological Shape Variability Modeling (MFCA 2013), Nagoya, Japan

    Pennec, X. (red.), Joshi, S. (red.), Nielsen, Mads (red.), Fletcher, T. P. (red.), Durrleman, S. (red.) & Sommer, Stefan Horst (red.), 2013, INRIA. 134 s.

    Publikation: Bog/antologi/afhandling/rapportBogForskningfagfællebedømt

  100. Udgivet

    Deep feature learning for knee cartilage segmentation using a triplanar convolutional neural network

    Prasoon, A., Petersen, P. K., Igel, Christian, Lauze, Francois Bernard, Dam, Erik Bjørnager & Nielsen, Mads, 2013, Medical Image Computing and Computer-Assisted Intervention – MICCAI 2013: 16th International Conference, Nagoya, Japan, September 22-26, 2013, Proceedings, Part II. Mori, K., Sakuma, I., Sato, Y., Barillot, C. & Navab, N. (red.). Springer, s. 246-253 8 s. (Lecture notes in computer science, Bind 8150).

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  101. Udgivet

    Femoral cartilage segmentation in knee MRI scans using two stage voxel classification

    Prasoon, A., Igel, Christian, Loog, M., Lauze, Francois Bernard, Dam, E. & Nielsen, Mads, 2013, 35th Annual International Conference of the IEEE; Engineering in Medicine and Biology Society (EMBC), 2013. IEEE, s. 5469-5472 4 s.

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  102. Udgivet

    Higher-order momentum distributions and locally affine LDDMM registration

    Sommer, Stefan Horst, Nielsen, Mads, Darkner, Sune & Pennec, X., 2013, I : S I A M Journal on Imaging Sciences. 6, 1, s. 341-367 27 s.

    Publikation: Bidrag til tidsskriftTidsskriftartikel

  103. Udgivet

    Sparse multi-scale diffeomorphic registration: the kernel bundle framework

    Sommer, Stefan Horst, Lauze, Francois Bernard, Nielsen, Mads & Pennec, X., 2013, I : Journal of Mathematical Imaging and Vision. 46, 3, s. 292-308 17 s.

    Publikation: Bidrag til tidsskriftTidsskriftartikel

  104. Udgivet

    Hippocampal texture predicts conversion from MCI to Alzheimer's disease

    xfj310, xfj310, Igel, Christian & Nielsen, Mads, 2013, I : Alzheimer's & Dementia. 9, 4, Supplement, s. P52 1 s.

    Publikation: Bidrag til tidsskriftKonferenceabstrakt i tidsskrift

  105. Udgivet

    Hippocampal texture predicts conversion from MCI to Alzheimer's disease

    xfj310, xfj310, Pai, Akshay Sadananda Uppinakudru, Igel, Christian & Nielsen, Mads, 2013, I : Alzheimer's & Dementia. 9, 4, Supplement, s. P581 1 s.

    Publikation: Bidrag til tidsskriftKonferenceabstrakt i tidsskrift

  106. Udgivet

    Hippocampal texture predicts one-year hippocampal atrophy in mild cognitively impaired subjects

    xfj310, xfj310, Pai, Akshay Sadananda Uppinakudru, Mysling, P., Darkner, Sune, Chen, G., Oh, J., Suhy, J., Igel, Christian & Nielsen, Mads, 2013. 1 s.

    Publikation: KonferencebidragPosterForskningfagfællebedømt

  107. 2012
  108. Udgivet

    Towards exaggerated emphysema stereotypes

    Chen, C., xfj310, xfj310, Lauze, Francois Bernard, Igel, Christian, Loog, M., Feragen, Aasa, de Bruijne, Marleen & Nielsen, Mads, 2012, Medical Imaging 2012: Computer-Aided Diagnosis. van Ginneken, B. & Novak, C. L. (red.). SPIE - International Society for Optical Engineering, 13 s. 83150Q. (Proceedings of S P I E - International Society for Optical Engineering, Bind 7964). (Progress in Biomedical Optics and Imaging; Nr. 31, Bind 13).

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  109. Udgivet

    Metric learning by directly minimizing the k-NN training error

    Chernoff, K., Loog, M. & Nielsen, Mads, 2012, 2012 21st International Conference on Pattern Recognition (ICPR). IEEE, s. 1265-1268 4 s.

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

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