Marleen de Bruijne
Professor
Image Analysis, Computational Modelling and Geometry
Universitetsparken 1
2100 København Ø
- Published
A geometric framework for statistics on trees
Feragen, A., Nielsen, Mads, Hauberg, S., Lo, P. C. P., de Bruijne, Marleen & Lauze, Francois Bernard, 2011, Department of Computer Science, University of Copenhagen. 47 p. (Koebenhavns Universitet. Datalogisk Institut. Rapport; No. 11/02).Research output: Book/Report › Report › Research
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An airway tree-shape model for geodesic airway branch labeling
Feragen, A., Lo, P. C. P., Gorbunova, V., Nielsen, Mads, Dirksen, A., Reinhardt, J. M., Lauze, Francois Bernard & de Bruijne, Marleen, 2011, MFCA 2011: 3rd MICCAI Workshop on Mathematical Foundations of Computational Anatomy. Pennec, X., Joshi, S. & Nielsen, M. (eds.). p. 123-134 12 p.Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
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Geodesic atlas-based labeling of anatomical trees: application and evaluation on airways extracted from CT
Feragen, A., Petersen, Jens, Owen, M., Lo, P., Thomsen, L. H., Wille, M. M. W., Dirksen, A. & de Bruijne, Marleen, 2015, In: IEEE Transactions on Medical Imaging. 34, 6, p. 1212-1226 15 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Tree-space statistics and approximations for large-scale analysis of anatomical trees
Feragen, A., Owen, M., Petersen, Jens, Wille, M. M. W., Thomsen, L. H., Dirksen, A. & de Bruijne, Marleen, 2013, Information Processing in Medical Imaging: 23rd International Conference, IPMI 2013, Asilomar, CA, USA, June 28–July 3, 2013. Proceedings. Gee, J. C., Joshi, S., Pohl, K. M., Wells, W. M. & Zöllei, L. (eds.). Springer, p. 74-85 12 p. (Lecture notes in computer science, Vol. 7917).Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
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Toward a theory of statistical tree-shape analysis
Feragen, A., Lo, P. C. P., de Bruijne, Marleen, Nielsen, Mads & Lauze, Francois Bernard, 2013, In: I E E E Transactions on Pattern Analysis and Machine Intelligence. 35, 8, p. 2008-2021 14 p.Research output: Contribution to journal › Journal article › Research › peer-review
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A hierarchical scheme for geodesic anatomical labeling of airway trees
Feragen, A., Petersen, Jens, Owen, M., Lo, P. C. P., Thomsen, L., Wille, M. M. W., Dirksen, A. & de Bruijne, Marleen, 2012, Medical Image Computing and Computer-Assisted Intervention – MICCAI 2012: 15th International Conference, Nice, France, October 1-5, 2012, Proceedings, Part III. Ayache, N., Delingette, H., Golland, P. & Mori, K. (eds.). Springer, p. 147-155 9 p. (Lecture notes in computer science, Vol. 7512).Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
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Preface: Information Processing in Medical Imaging (IPMI 2023)
Frangi, A., de Bruijne, Marleen, Wassermann, D. & Navab, N., 2023, Information Processing in Medical Imaging: 28th International Conference, IPMI 2023, San Carlos de Bariloche, Argentina, June 18–23, 2023, Proceedings. Springer, p. v-vi (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), Vol. 13939 LNCS).Research output: Chapter in Book/Report/Conference proceeding › Preface/postscript › Research
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Assessment of fully automatic segmentation of pulmonary artery and aorta on non-contrast CT with optimal surface graph cuts
Gamechi, Z. S., Arias-Lorza, A. M., Saghir, Z., Bos, D. & de Bruijne, Marleen, 2021, In: Medical Physics. 48, 12, p. 7837-7849Research output: Contribution to journal › Journal article › Research › peer-review
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Multiple classifier systems in texton-based approach for the classification of CT images of Lung
Gangeh, M. J., Sørensen, L., Shaker, S. B., Kamel, M. S. & de Bruijne, Marleen, 2011, Medical Computer Vision. Recognition Techniques and Applications in Medical Imaging: International MICCAI Workshop, MCV 2010, Beijing, China, September 20, 2010, Revised Selected Papers. Menze, B., Langs, G., Tu, Z. & Criminsi, A. (eds.). Springer, p. 153-163 11 p. (Lecture notes in computer science, Vol. 6533).Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
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A texton-based approach for the classification of lung parenchyma in CT images
Gangeh, M. J., Sørensen, L., Shaker, S. B., Kamel, M. S., de Bruijne, Marleen & Loog, M., 2010, Medical Image Computing and Computer-Assisted Intervention - MICCAI 2010: 13th International Conference, Beijing, China, September 20-24, 2010, Proceedings, Part III. Jiang, T., Navab, N., Pluim, J. P. W. & Viergever, M. A. (eds.). Springer, Vol. Part III. p. 595-602 8 p. (Lecture notes in computer science; No. 6363).Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
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Distribution, size, and shape of abdominal aortic calcified deposits and their relationship to mortality in postmenopausal women
Ganz, Melanie, de Bruijne, Marleen, Dam, E. B., Pettersen, P., Karsdal, M. A., Christiansen, C. & Nielsen, Mads, 2012, In: International Journal of Biomedical Imaging. 2012, 8 p., 459286.Research output: Contribution to journal › Journal article › Research › peer-review
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MACD - an imaging marker for cardiovascular disease
Ganz, Melanie, de Bruijne, Marleen & Nielsen, Mads, 2010, Medical Imaging 2010: computer-aided diagnosis. Karssemeijer, N. & Summers, R. M. (eds.). SPIE - International Society for Optical Engineering, 9 p. 76240Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
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Automatic airway segmentation from computed tomography using robust and efficient 3-D convolutional neural networks
Garcia-uceda, A., Selvan, Raghav, Saghir, Zaigham, Tiddens, H. A. W. M. & de Bruijne, Marleen, 2021, In: Scientific Reports. 11, 1, 15 p., 16001.Research output: Contribution to journal › Journal article › Research › peer-review
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A computer aided detection system for cerebral microbleeds in brain MRI
Ghafaryasl, B., van der Lijn, F., Poels, M., Vrooman, H., Ikram, M. A., Niessen, W. J., van der Lugt, A., Vernooij, M. & de Bruijne, Marleen, 2012, 2012 9th IEEE International Symposium on Biomedical Imaging: from nano to macro. IEEE, p. 138-141 4 p.Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
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Estimating risk of future fracture or deformity of vertebrae of spine, by comparing processed data representing appearance of vertebra of spine with statistical model and deriving similarity between vertebra of spine and model
Ghosh, A., Nielsen, Mads, Karsdal, M. A., Christiansen, C., de Bruijne, Marleen & Petterson, P., 2011, IPC No. G06T-007/00, Patent No. WO2009124995-A1, 15 Oct 2009, Priority date 10 Apr 2008, Priority No. GB006509Research output: Patent
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Curve- and Surface-based Registration of Lung CT images via Currents
Gorbunova, V., Durrleman, S., Lo, P., Pennec, X. & de Bruijne, Marleen, 2009, The Second International Workshop on Pulmonary Image Analysis. Brown, M., de Bruijne, M., van Ginneken, B., Kiraly, A., Kuhnigk, J-M., Lorenz, C., McClelland, J. R., Mori, K., Reeves, A. & Reinhardt, J. M. (eds.). CreateSpace, p. 15-25 11 p.Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
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Weight preserving image registration for monitoring disease progression in lung CT.
Gorbunova, V., Lo, P. C. P., Haseem, A., Dirksen, A., Nielsen, Mads & de Bruijne, Marleen, 2008, Mecical Image Computing and Computer-Assisted Intervention - MICCAI 2008: 11th International Conference, New York, NY, USA, September 6-10, 2008, proceedings, Part II. Metaxas, D., Axel, L., Fichtinger, G. & Szekely, G. (eds.). Springer, p. 863-871 8 p. (Lecture notes in computer science; No. 5242).Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
- Published
Mass preserving image registration for lung CT
Gorbunova, V., Sporring, Jon, Lo, P. C. P., Loeve, M., Tiddens, H. A., Nielsen, Mads, Dirksen, A. & de Bruijne, Marleen, 2012, In: Medical Image Analysis. 16, 4, p. 786-795 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Mass Preserving Registration for lung CT
Gorbunova, V., Lo, P. C. P., Loeve, M., Tiddens, H., Sporring, Jon, Nielsen, Mads & de Bruijne, Marleen, 2009, Proceedings of the SPIE: Medical Imaging 2009: Image Processing. Vol. 7259. 10 p. (Proceedings of the SPIE, Vol. 7259).Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
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Mass preserving image registration: results of Evaluation of Methods for Pulmonary Image Registration 2010 Challenge
Gorbunova, V., Sporring, Jon, Lo, P. C. P., Dirksen, A. & de Bruijne, Marleen, 2010, Medical image analysis for the clinic: a grand challenge: workshop proceedings from the 13th International Conference on Medical Image Computing And Computer Assisted Intervention. van Ginneken, B., Murphy, K., Heimann, T., Pekar, V. & Deng, X. (eds.). CreateSpace Independent Publishing Platform , p. 155-164 10 p.Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
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Lung CT registration combining intensity, curves and surfaces
Gorbunova, V., Durrieman, S., Lo, P. C. P., Pennec, X. & de Bruijne, Marleen, 2010, Proceedings - 2010 7th IEEE International Symposium on Biomedical Imaging: from nano to macro. IEEE, p. 340-343 4 p.Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
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Early detection of emphysema progression
Gorbunova, V., Jacobs, S. S. A. M., Lo, P. C. P., Dirksen, A., Nielsen, Mads, Bab-Hadiashar, A. & de Bruijne, Marleen, 2010, Medical Image Computing and Computer-Assisted Intervention - MICCAI 2010: 13th International Conference, Beijing, China, September 20-24, 2010, Proceedings, Part II. Jiang, T., Navab, N., Pluim, J. P. W. & Viergever, M. A. (eds.). Springer, Vol. Part II. p. 193-200 8 p. (Lecture notes in computer science; No. 6362).Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
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Imaging of respiratory muscles in neuromuscular disease: A review
Harlaar, L., Ciet, P., van der Ploeg, A. T., Brusse, E., van der Beek, N. A. M. E., Wielopolski, P. A., de Bruijne, Marleen, Tiddens, H. A. W. M. & van Doorn, P. A., 1 Mar 2018, In: Neuromuscular Disorders. 28, 3, p. 246-256 11 p.Research output: Contribution to journal › Review › Research › peer-review
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MRI changes in diaphragmatic motion and curvature in Pompe disease over time
Harlaar, L., Ciet, P., van Tulder, G., van Kooten, H. A., van der Beek, N. A. M. E., Brusse, E., de Bruijne, Marleen, Tiddens, H. A. W. M., van der Ploeg, A. T. & van Doorn, P. A., 2022, In: European Radiology. 32, p. 8681–8691Research output: Contribution to journal › Journal article › Research › peer-review
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Chest MRI to diagnose early diaphragmatic weakness in Pompe disease
Harlaar, L., Ciet, P., van Tulder, G., Pittaro, A., van Kooten, H. A., van der Beek, N. A. M. E., Brusse, E., Wielopolski, P. A., de Bruijne, Marleen, van der Ploeg, A. T., Tiddens, H. A. W. M. & van Doorn, P. A., 2021, In: Orphanet Journal of Rare Diseases. 16, 1, p. 1-12 21.Research output: Contribution to journal › Journal article › Research › peer-review
ID: 545222
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Evaluation of registration methods on thoracic CT: the EMPIRE10 challenge
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Atherosclerotic plaque component segmentation in combined carotid MRI and CTA data incorporating class label uncertainty
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2150
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Distribution, size, shape, growth potential and extent of abdominal aortic calcified deposits predict mortality in postmenopausal women
Research output: Contribution to journal › Journal article › Research › peer-review
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