Marleen de Bruijne
Professor
Image Analysis, Computational Modelling and Geometry
Universitetsparken 1
2100 København Ø
- 2020
- Published
Spectral Data Augmentation Techniques to Quantify Lung Pathology from CT-Images
Kayal, S., Dubost, F., Tiddens, H. A. W. M. & de Bruijne, Marleen, Apr 2020, ISBI 2020 - 2020 IEEE International Symposium on Biomedical Imaging. IEEE, p. 586-590 9098581Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
- Published
Weakly supervised object detection with 2D and 3D regression neural networks
Dubost, F., Adams, H., Yilmaz, P., Bortsova, G., Tulder, G. V., Ikram, M. A., Niessen, W., Vernooij, M. W. & de Bruijne, Marleen, Oct 2020, In: Medical Image Analysis. 65, 22 p., 101767.Research output: Contribution to journal › Journal article › Research › peer-review
- 2021
- Published
Adversarial attack vulnerability of medical image analysis systems: Unexplored factors
Bortsova, G., González-Gonzalo, C., Wetstein, S. C., Dubost, F., Katramados, I., Hogeweg, L., Liefers, B., van Ginneken, B., Pluim, J. P. W., Veta, M., Sánchez, C. I. & de Bruijne, Marleen, 2021, In: Medical Image Analysis. 73, 14 p., 102141.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Assessment of fully automatic segmentation of pulmonary artery and aorta on non-contrast CT with optimal surface graph cuts
Gamechi, Z. S., Arias-Lorza, A. M., Saghir, Z., Bos, D. & de Bruijne, Marleen, 2021, In: Medical Physics. 48, 12, p. 7837-7849Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Automatic airway segmentation from computed tomography using robust and efficient 3-D convolutional neural networks
Garcia-uceda, A., Selvan, Raghav, Saghir, Zaigham, Tiddens, H. A. W. M. & de Bruijne, Marleen, 2021, In: Scientific Reports. 11, 1, 15 p., 16001.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Chest MRI to diagnose early diaphragmatic weakness in Pompe disease
Harlaar, L., Ciet, P., van Tulder, G., Pittaro, A., van Kooten, H. A., van der Beek, N. A. M. E., Brusse, E., Wielopolski, P. A., de Bruijne, Marleen, van der Ploeg, A. T., Tiddens, H. A. W. M. & van Doorn, P. A., 2021, In: Orphanet Journal of Rare Diseases. 16, 1, p. 1-12 21.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Creating a training set for artificial intelligence from initial segmentations of airways
Dudurych, I., Garcia-Uceda, A., Saghir, Zaigham, Tiddens, H. A. W. M., Vliegenthart, R. & de Bruijne, Marleen, 2021, In: European radiology experimental. 5, 1, 7 p., 54.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Crowdsourcing airway annotations in chest computed tomography images
Cheplygina, V., Perez-Rovira, A., Kuo, W., Tiddens, H. A. W. M. & de Bruijne, Marleen, 2021, In: PLoS ONE. 16, e0249580.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Developing and validating COVID-19 adverse outcome risk prediction models from a bi-national European cohort of 5594 patients
Jimenez-Solem, E., Petersen, T. S., Hansen, C., Hansen, C., Lioma, C., Igel, C., Boomsma, W., Krause, O., Lorenzen, S., Selvan, R., Petersen, J., Nyeland, M. E., Ankarfeldt, M. Z., Virenfeldt, G. M., Winther-Jensen, M., Linneberg, A., Ghazi, M. M., Detlefsen, N., Lauritzen, A. D., Smith, A. G. & 15 others, , 2021, In: Scientific Reports. 11, 1, 12 p., 3246.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Intracranial arteriosclerosis is related to cerebral small vessel disease: a prospective cohort study
Vinke, E. J., Yilmaz, P., van der Toorn, J. E., Fakhry, R., Frenzen, K., Dubost, F., Licher, S., de Bruijne, Marleen, Kavousi, M., Ikram, M. A., Vernooij, M. W. & Bos, D., 2021, In: Neurobiology of Aging. 105, p. 16-24Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Learning from Imperfect Data: Weak Labels, Shifting Domains, and Small Datasets in Medical Imaging
de Bruijne, Marleen, 2021, Bildverarbeitung für die Medizin 2021: Proceedings, German Workshop on Medical Image Computing, Regensburg, March 7-9, 2021. Springer, p. 1 1 p.Research output: Chapter in Book/Report/Conference proceeding › Conference abstract in proceedings › Research
- Published
Preface
Ernst, F., Heinrich, M., Lellmann, J., Schlaefer, A., Dou, Q. & de Bruijne, Marleen, 2021, e Proceedings of the Fourth International Conference on Medical Imaging with Deep Learning – MIDL 2021. PMLR, p. 1-4 (Proceedings of Machine Learning Research, Vol. 143).Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research
- Published
Preface (vols 1-8)
de Bruijne, Marleen, Cattin, P. C., Cotin, S., Padoy, N., Speidel, S., Zheng, Y. & Essert, C., 2021, Medical Image Computing and Computer Assisted Intervention – MICCAI 2021: 24th International Conference, Strasbourg, France, September 27 – October 1, 2021, Proceedings, Part VII. Springer, Vol. 12905 LNCS. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)).Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research
- Published
Uncertainty-Based Segmentation of Myocardial Infarction Areas on Cardiac MR Images
Camarasa, R., Faure, A., Crozier, T., Bos, D. & de Bruijne, Marleen, 2021, Statistical Atlases and Computational Models of the Heart. MandMs and EMIDEC Challenges - 11th International Workshop, STACOM 2020, Held in Conjunction with MICCAI 2020, Revised Selected Papers. Puyol Anton, E., Pop, M., Sermesant, M., Campello, V., Lalande, A., Lekadir, K., Suinesiaputra, A., Camara, O. & Young, A. (eds.). Springer, p. 385-391 7 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), Vol. 12592 LNCS).Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
- Published
Automated Segmentation and Volume Measurement of Intracranial Internal Carotid Artery Calcification at Noncontrast CT
Bortsova, G., Bos, D., Dubost, F., Vernooij, M. W., Ikram, M. K., van Tulder, G. & de Bruijne, Marleen, Sep 2021, In: Radiology: Artificial Intelligence. 3, 5, 10 p., e200226.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A Quantitative Comparison of Epistemic Uncertainty Maps Applied to Multi-Class Segmentation
Camarasa, R., Bos, D., Hendrikse, J., Nederkoorn, P., Kooi, M. E., Lugt, A. V. D. & de Bruijne, Marleen, 22 Sep 2021, In: The Journal of Machine Learning for Biomedical Imaging. 2021, p. 1-39 013.Research output: Contribution to journal › Journal article › Research › peer-review
- 2022
- Published
Bronchial wall parameters on CT in healthy never-smoking, smoking, COPD, and asthma populations: a systematic review and meta-analysis
Dudurych, I., Muiser, S., McVeigh, N., Kerstjens, H. A. M., van den Berge, M., de Bruijne, Marleen & Vliegenthart, R., 2022, In: European Radiology. 32, p. 5308–5318Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Deep learning methods for automatic evaluation of delayed enhancement-MRI. The results of the EMIDEC challenge
Lalande, A., Chen, Z., Pommier, T., Decourselle, T., Qayyum, A., Salomon, M., Ginhac, D., Skandarani, Y., Boucher, A., Brahim, K., de Bruijne, M., Camarasa, R., Correia, T. M., Feng, X., Girum, K. B., Hennemuth, A., Huellebrand, M., Hussain, R., Ivantsits, M., Ma, J. & 13 others, , 2022, In: Medical Image Analysis. 79, p. 1-12 102428.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Diaphragmatic dysfunction in neuromuscular disease, an MRI study
Harlaar, L., Ciet, P., van Tulder, G., Brusse, E., Timmermans, R. G. M., Janssen, W. G. M., de Bruijne, Marleen, van der Ploeg, A. T., Tiddens, H. A. W. M., van Doorn, P. A. & van der Beek, N. A. M. E., 2022, In: Neuromuscular Disorders. 32, 1, p. 15-24Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Differentiable Boundary Point Extraction for Weakly Supervised Star-shaped Object Segmentation
Camarasa, R., Kervadec, H., Bos, D. & de Bruijne, Marleen, 2022, In: Proceedings of Machine Learning Research. 172, p. 188-198Research output: Contribution to journal › Conference article › Research › peer-review
- Published
MRI changes in diaphragmatic motion and curvature in Pompe disease over time
Harlaar, L., Ciet, P., van Tulder, G., van Kooten, H. A., van der Beek, N. A. M. E., Brusse, E., de Bruijne, Marleen, Tiddens, H. A. W. M., van der Ploeg, A. T. & van Doorn, P. A., 2022, In: European Radiology. 32, p. 8681–8691Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Sleep and perivascular spaces in the middle-aged and elderly population
Lysen, T. S., Yilmaz, P., Dubost, F., Ikram, M. A., de Bruijne, Marleen, Vernooij, M. W. & Luik, A. I., 2022, In: Journal of Sleep Research. 31, 2, p. 1-* e13485.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
An end-to-end approach to segmentation in medical images with CNN and posterior-CRF
Chen, S., Sedghi Gamechi, Z., Dubost, F., van Tulder, G. & de Bruijne, Marleen, Feb 2022, In: Medical Image Analysis. 76, p. 1-12 102311.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
DS6, Deformation-Aware Semi-Supervised Learning: Application to Small Vessel Segmentation with Noisy Training Data
Chatterjee, S., Prabhu, K., Pattadkal, M., Bortsova, G., Sarasaen, C., Dubost, F., Mattern, H., de Bruijne, Marleen, Speck, O. & Nürnberger, A., 22 Sep 2022, In: Journal of Imaging. 8, 10, p. 1-22 259.Research output: Contribution to journal › Journal article › Research › peer-review
- 2023
- Published
Determinants of Perivascular Spaces in the General Population: A Pooled Cohort Analysis of Individual Participant Data
Evans, T. E., Knol, M. J., Schwingenschuh, P., Wittfeld, K., Hilal, S., Ikram, M. A., Dubost, F., Van Wijnen, K. M. H., Katschnig, P., Yilmaz, P., de Bruijne, Marleen, Habes, M., Chen, C., Langer, S., Völzke, H., Ikram, M. K., Grabe, H. J., Schmidt, R., Adams, H. H. H. & Vernooij, M. W., 2023, In: Neurology. 100, 2, p. E107-E122Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Graph cut-based segmentation
Petersen, Jens, Oguz, I. & de Bruijne, Marleen, 2023, Medical Image Analysis. Academic Press, p. 247-273Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review
- Published
Nested star-shaped objects segmentation using diameter annotations
Camarasa, R., Kervadec, H., Kooi, M. E., Hendrikse, J., Nederkoorn, P. J., Bos, D. & de Bruijne, Marleen, 2023, In: Medical Image Analysis. 90, 11 p., 102934.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Preface: Information Processing in Medical Imaging (IPMI 2023)
Frangi, A., de Bruijne, Marleen, Wassermann, D. & Navab, N., 2023, Information Processing in Medical Imaging: 28th International Conference, IPMI 2023, San Carlos de Bariloche, Argentina, June 18–23, 2023, Proceedings. Springer, p. v-vi (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), Vol. 13939 LNCS).Research output: Chapter in Book/Report/Conference proceeding › Preface/postscript › Research
- Published
Reproducibility of a combined artificial intelligence and optimal-surface graph-cut method to automate bronchial parameter extraction
Dudurych, I., Garcia-Uceda, A., Petersen, Jens, Du, Y., Vliegenthart, R. & de Bruijne, Marleen, 2023, In: European Radiology. 33, p. 6718–6725Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The effect of CFTR modulators on structural lung disease in cystic fibrosis
Mok, L. C., Garcia-Uceda, A., Cooper, M. N., Kemner-Van De Corput, M., de Bruijne, Marleen, Feyaerts, N., Rosenow, T., De Boeck, K., Stick, S. & Tiddens, H. A. W. M., 2023, In: Frontiers in Pharmacology. 14, 10 p., 1147348.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Unpaired, unsupervised domain adaptation assumes your domains are already similar
van Tulder, G. & de Bruijne, Marleen, 2023, In: Medical Image Analysis. 87, 17 p., 102825.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Why is the winner the best?
Eisenmann, M., Reinke, A., Weru, V., Tizabi, M. D., Isensee, F., Adler, T. J., Ali, S., Andrearczyk, V., Aubreville, M., Baid, U., Bakas, S., Balu, N., Bano, S., Bernal, J., Bodenstedt, S., Casella, A., Cheplygina, V., Daum, M., Bruijne, M. D., Depeursinge, A. & 105 others, , 2023, Proceedings - 2023 IEEE/CVF Conference on Computer Vision and Pattern Recognition, CVPR 2023. IEEE Computer Society Press, p. 19955-19966Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
- Published
Editorial for the MEDIA MICCAI special issue 2021
de Bruijne, Marleen, Cattin, P. C., Cotin, S., Padoy, N., Speidel, S., Zheng, Y. & Essert, C., Jan 2023, In: Medical Image Analysis. 83, 1 p., 102695.Research output: Contribution to journal › Editorial › Research
- 2024
- Published
Automatic analysis of bronchus-artery dimensions to diagnose and monitor airways disease in cystic fibrosis
Lv, Q., Gallardo-Estrella, L., Andrinopoulou, E., Chen, Y., Charbonnier, J., Sandvik, R. M., Caudri, D., Nielsen, Kim G., de Bruijne, Marleen, Ciet, P. & Tiddens, H., 2024, In: Thorax. p. 13-22Research output: Contribution to journal › Journal article › Research › peer-review
- E-pub ahead of print
Burden of intracranial artery calcification in white patients with ischemic stroke
Berghout, B. P., Camarasa, R. Y. R., Van Dam-Nolen, D. H. K., van der Lugt, A., de Bruijne, Marleen, Koudstaal, P. J., Ikram, M. K. & Bos, D., 2024, (E-pub ahead of print) In: European Stroke Journal.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Leveraging Ellipsoid Bounding Shapes and Fast R-CNN for Enlarged Perivascular Spaces Detection and Segmentation
Zabihi, M., Tangwiriyasakul, C., Ingala, S., Lorenzini, L., Camarasa, R., Barkhof, F., de Bruijne, Marleen, Cardoso, M. J. & Sudre, C. H., 2024, Machine Learning in Medical Imaging - 14th International Workshop, MLMI 2023, Held in Conjunction with MICCAI 2023, Proceedings. Cao, X., Ouyang, X., Xu, X., Rekik, I. & Cui, Z. (eds.). Springer, p. 325-334 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), Vol. 14349 LNCS).Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
- E-pub ahead of print
Morphology of the dysplastic hip and the relationship with sex and acetabular version
Mechlenburg, I., De Raedt, S., Achterberg, H. C., Stilling, M., Rømer, L., Søballe, K. & de Bruijne, Marleen, 2024, (E-pub ahead of print) In: Clinical Anatomy.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Where is VALDO? VAscular Lesions Detection and segmentatiOn challenge at MICCAI 2021
ALFA study, A. S., 2024, In: Medical Image Analysis. 91, 23 p., 103029.Research output: Contribution to journal › Journal article › Research › peer-review
ID: 545222
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Evaluation of registration methods on thoracic CT: the EMPIRE10 challenge
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Atherosclerotic plaque component segmentation in combined carotid MRI and CTA data incorporating class label uncertainty
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Distribution, size, shape, growth potential and extent of abdominal aortic calcified deposits predict mortality in postmenopausal women
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