Anders Krogh

Anders Krogh

Professor

ORCID: 0000-0002-5147-6282

Publication year:
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51 - 75 out of 106Page size: 25
  1. 2011
  2. Published

    miR-449 inhibits cell proliferation and is down-regulated in gastric cancer

    Bou Kheir, T., Futoma-Kazmierczak, E., Jacobsen, A., Krogh, Anders, Bardram, L., Hother, C., Grønbæk, Kirsten, Federspiel, B., Lund, Anders H. & Friis-Hansen, Lennart Jan, 2011, In: Molecular Cancer. 10, p. 1-12 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    microRNA-101 is a potent inhibitor of autophagy

    Frankel, Lisa, Wen, J., Lees, M., Høyer-Hansen, M., Farkas, T., Krogh, Anders, Jäättelä, M. & Lund, Anders H., 2011, In: E M B O Journal. 30, p. 4628-4641 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. 2012
  5. Published

    Improving ancient DNA read mapping against modern reference genomes

    Schubert, Mikkel, Ginolhac, A., Lindgreen, S., Thompson, J. F., Al-Rasheid, K. A. S., Willerslev, Eske, Krogh, Anders & Orlando, L. A. A., 2012, In: BMC Genomics. 13, 15 p., 178.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    Mammalian tissues defective in nonsense-mediated mRNA decay display highly aberrant splicing patterns

    Weischenfeldt, Joachim Lütken, Waage, J. E., Tian, G., Zhao, J., Damgaard, I., Jakobsen, J. S., Kristiansen, Karsten, Krogh, Anders, Wang, J. & Porse, Bo Torben, 2012, In: Genome Biology (Online Edition). 13, 5, 19 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    microRNA-143 down-regulates Hexokinase 2 in colon cancer cells

    Gregersen, Lea Haarup, Jacobsen, A., Frankel, Lisa, Wen, J., Krogh, Anders & Lund, Anders H., 2012, In: B M C Cancer. 12, 232, 23 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    microRNA-146a inhibits G protein-coupled receptor-mediated activation of NF-κB by targeting CARD10 and COPS8 in gastric cancer

    Crone, S. G., Jacobsen, A., Federspiel, B., Bardram, L., Krogh, Anders, Lund, Anders H. & Friis-Hansen, Lennart Jan, 2012, In: Molecular Cancer. 11, 71, p. 71 31 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. 2013
  10. Published

    A short-read multiplex sequencing method for reliable, cost-effective and high-throughput genotyping in large-scale studies: [plus] Erratum

    Cao, H., Wang, Y., Zhang, W., Chai, X., Zhang, X., Chen, S., Yang, F., Zhang, C., Guo, Y., Liu, Y., Tang, Z., Chen, C., Xue, Y., Zhen, H., Xu, Y., Rao, B., Liu, T., Zhao, M., Zhang, W., Li, Y. & 6 others, Zhang, X., Tellier, L. C. A. M., Krogh, Anders, Kristiansen, Karsten, Wang, J. & Li, J., 2013, In: Human Mutation. 34, 12, p. 1715-1720 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    Alterations in polyadenylation and its implications for endocrine disease

    Rehfeld, Anders Aagaard, Plass, M., Krogh, Anders & Friis-Hansen, Lennart Jan, 2013, In: Frontiers in Endocrinology. 4, 23 p., 53.

    Research output: Contribution to journal › Review › Research › peer-review

  12. Published

    Genome analysis reveals insights into physiology and longevity of the Brandt's bat Myotis brandtii

    Seim, I., Fang, X., Xiong, Z., Lobanov, A. V., Huang, Z., Ma, S., Feng, Y., Turanov, A. A., Zhu, Y., Lenz, T. L., Gerashchenko, M. V., Fan, D., Yim, S. H., Yao, X., Jordan, D., Xiong, Y., Ma, Y., Lyapunov, A. N., Chen, G., Kulakova, O. I. & 9 others, Sun, Y., Lee, S., Bronson, R. T., Moskalev, A. A., Sunyaev, S. R., Zhang, G., Krogh, Anders, Wang, J. & Gladyshev, V. N., 2013, In: Nature Communications. 4, 8 p., 2212.

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Published

    Improving The Analysis Of Gene Expression Profiles By Comparing AML Blasts With Their Nearest Normal Counterparts

    Rapin, N., Bagger, F. O., Jendholm, J., Mora-Jensen, H. I., Krogh, Anders, Kohlmann, A., Thiede, C., Borregaard, N., Bullinger, L., Winther, Ole, Theilgaard-Mønch, Kim & Porse, Bo Torben, 2013, In: Blood. 122, 21

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  14. Published

    Loss of miR-10a activates Lpo and collaborates with activated Wnt signaling in inducing intestinal Neoplasia in female mice

    Stadthagen Gomez, G., Tehler, D. E., Høyland-Kroghsbo, Nina Molin, Wen, J., Krogh, Anders, Jensen, K. T., Santoni Rugiu, Eric, Engelholm, Lars Henning & Lund, Anders H., 2013, In: P L o S Genetics. 9, 10, 12 p., e1003913.

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Published

    On the accuracy of short read mapping

    Menzel, K. P., Frellsen, J., Plass, M., Rasmussen, S. H. & Krogh, Anders, 2013, Deep Sequencing Data Analysis. Shomron, N. (ed.). Springer Science+Business Media, p. 39-59 21 p. (Methods in Molecular Biology, Vol. 1038).

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  16. Published

    cWords - systematic microRNA regulatory motif discovery from mRNA expression data

    Rasmussen, S. H., Jacobsen, A. & Krogh, Anders, 2013, In: Silence. 4, 2, 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. Published

    Recalibrating Equus evolution using the genome sequence of an early Middle Pleistocene horse

    Orlando, L. A. A., Ginolhac, A., Zhang, G., Froese, D., Albrechtsen, A., Stiller, M., Schubert, M., Cappellini, E., Petersen, B., Moltke, I., Johnson, P. L. F., Fumagalli, M., Mouatt, J. T. V., Raghavan, M., Korneliussen, T. S., Malaspinas, A. S., Vogt, J., Szklarczyk, D. M., Kelstrup, C., Vinther, J. & 36 others, Dolocan, A., Stenderup, Jesper Tandberg, Velazquez, A. M. V., Cahill, J., Rasmussen, M., Wang, X., Min, J., Zazula, G. D., Seguin-Orlando, A., Mortensen, C., Magnussen, K., Thompson, J. F., Weinstock, J., Gregersen, K., Røed, K. H., Eisenmann, V., Rubin, C. J., Miller, D. C., Antczak, D. F., Bertelsen, M. F., Brunak, S., Al-Rasheid, K. A. S., Ryder, O., Andersson, L., Mundy, J., Krogh, Anders, Gilbert, M Thomas P, Kjær, Kurt H., Sicheritz-Pontén, T., Jensen, Lars Juhl, Olsen, Jesper Velgaard, Hofreiter, M., Nielsen, R., Shapiro, B., Wang, J. & Willerslev, Eske, 4 Jul 2013, In: Nature. 499, 7456, p. 74-78 5 p.

    Research output: Contribution to journal › Letter › Research › peer-review

  18. Published

    Reconstructing genome evolution in historic samples of the Irish potato famine pathogen

    Martin, M. D., Cappellini, Enrico, Samaniego Castruita, J. A., Zepeda Mendoza, M. L., Campos, P., Seguin-Orlando, A., Wales, N., Orlando, L. A. A., Ho, S. Y. W., Dietrich, F. S., Mieczkowski, P. A., Heitman, J., Willerslev, Eske, Krogh, Anders, Ristaino, J. B. & Gilbert, M Thomas P, 18 Jul 2013, In: Nature Communications. 4, 7 p., 2172.

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. 2014
  20. Published

    Adaptable probabilistic mapping of short reads using position specific scoring matrices

    Kerpedjiev, P., Frellsen, J., Lindgreen, S. & Krogh, Anders, 2014, In: B M C Bioinformatics. 15, 17 p., 15:100.

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. Published

    Adaptations to a subterranean environment and longevity revealed by the analysis of mole rat genomes

    Fang, X., Seim, I., Huang, Z., Gerashchenko, M. V., Xiong, Z., Turanov, A. A., Zhu, Y., Lobanov, A. V., Fan, D., Yim, S. H., Yao, X., Ma, S., Yang, L., Lee, S-G., Kim, E. B., Bronson, R. T., Sumbera, R., Buffenstein, R., Zhou, X., Krogh, A. & 4 others, Park, T. J., KU, thw266, Wang, J. & Gladyshev, V. N., 2014, In: Cell Reports. 8, 5, p. 1354-1364 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Published

    Algorithms for mapping high-throughput DNA sequences

    Frellsen, J., Menzel, P. & Krogh, Anders, 2014, Comprehensive Biomedical Physics: Bioinformatics. Brahme, A. (ed.). Elsevier, Vol. 6. p. 41-50 10 p. (Reference Module in Biomedical Sciences, Vol. 6).

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  23. Published

    Alternative polyadenylation of tumor suppressor genes in small intestinal neuroendocrine tumors

    Rehfeld, Anders Aagaard, Plass, M., Døssing, K., Knigge, Ulrich, Kjær, Andreas, Krogh, Anders & Friis-Hansen, Lennart Jan, 2014, In: Frontiers in Endocrinology. 5, 10 p., 46.

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Published

    Bayesian transcriptome assembly

    Sørensen, L. M., Sibbesen, Jonas Andreas & Krogh, Anders, 2014, In: Genome Biology (Online Edition). 15, 10, 11 p., 501.

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    Genome-wide adaptive complexes to underground stresses in blind mole rats Spalax

    Fang, X., Nevo, E., Han, L., Levanon, E. Y., Zhao, J., Avivi, A., Larkin, D., Jiang, X., Feranchuk, S., Zhu, Y., Fishman, A., Feng, Y., Sher, N., Xiong, Z., Hankeln, T., Huang, Z., Gorbunova, V., Zhang, L., Zhao, W., Wildman, D. E. & 33 others, Xiong, Y., Gudkov, A., Zheng, Q., Rechavi, G., Liu, S., Bazak, L., Chen, J., Knisbacher, B. A., Lu, Y., Shams, I., Gajda, K., Farre, M., Kim, J., Lewin, H. A., Ma, J., Band, M., Bicker, A., Kranz, A., Mattheus, T., Schmidt, H., Seluanov, A., Azpurua, J., McGowen, M. R., Ben Jacob, E., Li, K., Peng, S., Zhu, X., Liao, X., Li, S., Krogh, Anders, Zhou, X., Brodsky, L. & Wang, J., 2014, In: Nature Communications. 5, 9 p., 3966.

    Research output: Contribution to journal › Journal article › Research › peer-review

  26. Published

    Genome-wide nucleosome map and cytosine methylation levels of an ancient human genome

    Pedersen, J. S., Valen, E., Velazquez, A. M. V., Parker, B. J., Rasmussen, M., Lindgreen, S., Lilje, B., Tobin, D. J., Kelly, T. K., Vang, S., Andersson, R., Jones, P. A., Hoover, C. A., Tikhonov, A., Prokhortchouk, E., Rubin, E. M., Sandelin, A. G., Gilbert, M. T. P., Krogh, A., Willerslev, E. & 1 others, Orlando, L. A. A., 2014, In: Genome Research. 24, 3, p. 454-466 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  27. Published

    Rapid detection of structural variation in a human genome using nanochannel-based genome mapping technology

    Cao, H., Hastie, A. R., Cao, D., Lam, E. T., Sun, Y., Huang, H., Liu, X., Lin, L., Andrews, W., Chan, S., Huang, S., Tong, X., Requa, M., Anantharaman, T., Krogh, Anders, Yang, H., Cao, H. & Xu, X., 2014, In: GigaScience. 3, 11 p., 34.

    Research output: Contribution to journal › Journal article › Research › peer-review

  28. Published

    SNPest: a probabilistic graphical model for estimating genotypes

    Lindgreen, S., Krogh, Anders & Pedersen, Jakob Skou, 2014, In: BMC Research Notes. 7, 12 p., 298.

    Research output: Contribution to journal › Journal article › Research › peer-review

  29. Published

    Whole-genome sequencing of cultivated and wild peppers provides insights into Capsicum domestication and specialization

    Qin, C., Yu, C., Shen, Y., Fang, X., Chen, L., Min, J., Cheng, J., Zhao, S., Xu, M., Luo, Y., Yang, Y., Wu, Z., Mao, L., Wu, H., Ling-Hu, C., Zhou, H., Lin, H., Gonzalez-Morales, S., Trejo-Saavedra, D. L., Tian, H. & 53 others, Tang, X., Zhao, M., Huang, Z., Zhou, A., Yao, X., Cui, J., Li, W., Chen, Z., Feng, Y., Niu, Y., Bi, S., Yang, X., Li, W., Cai, H., Luo, X., Montes-Hernandez, S., Leyva-Gonzalez, M. A., Xiong, Z., He, X., Bai, L., Tan, S., Tang, X., Liu, D., Liu, J., Zhang, S., Chen, M., Zhang, L., Zhang, L., Zhang, Y., Liao, W., Zhang, Y., Wang, M., Lv, X., Wen, B., Liu, H., Luan, H., Zhang, Y., Yang, S., Wang, X., Xu, J., Li, X., Li, S., Wang, J., Palloix, A., Bosland, P. W., Li, Y., Krogh, Anders, Rivera-Bustamante, R. F., Herrera-Estrella, L., Yin, Y., Yu, J., Hu, K. & Zhang, Z., 2014, In: Proceedings of the National Academy of Sciences of the United States of America. 111, 14, p. 5135-5140 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

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ID: 9738