Anders Krogh
Professor
Machine Learning
Universitetsparken 1, 2100 København Ø
Center for Health Data Science
Blegdamsvej 3B
2200 København N
- 2001
- Published
On the total number of genes and their length distribution in complete microbial genomes
Skovgaard, M., Jensen, Lars Juhl, Brunak, Søren, Ussery, D. & Krogh, Anders, 2001, In: Trends in Genetics. 17, 8, p. 425-8 4 p.Research output: Contribution to journal › Journal article › Research › peer-review
- 2002
A sequence-profile-based HMM for predicting and discriminating β barrel membrane proteins
Martelli, P. L., Fariselli, P., Krogh, Anders & Casadio, R., 2002, In: Bioinformatics. 18, Suppl. 1, p. S46-S53Research output: Contribution to journal › Journal article › Research › peer-review
- 2003
- Published
EasyGene - a prokaryotic gene finder that ranks ORFs by statistical significance
Larsen, T. S. & Krogh, Anders, 2003, In: BMC Bioinformatics. 4(1), p. 21Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Prediction of lipoprotein signal peptides in Gram-negative bacteria.
Juncker, A. S., Willenbrock, H., Heijne, G. V., Nielsen, H. & Krogh, Anders, 2003, In: Protein Science. 12(8), p. 1652-1662Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Reliability measures for membrane protein topology prediction algorithms
Melén, K., Krogh, Anders & Heijne, G. V., 2003, In: Journal of Molecular Biology. 327(3), p. 735-744Research output: Contribution to journal › Journal article › Research › peer-review
- Published
RpoD promoters in Campylobacter jejuni exhibit a strong periodic signal instead of a -35 box
Petersen, L., Larsen, T. S., Ussery, D. W., On, S. L. W. & Krogh, Anders, 2003, In: Journal of Molecular Biology. 326(5), p. 1361-1372Research output: Contribution to journal › Journal article › Research › peer-review
- 2004
- Published
A Combined Transmembrane Topology and Signal Peptide Prediction Method
Kall, L., Krogh, Anders & Sonnhammer, E. L., 2004, In: Journal of Molecular Biology. Vol. 338 (5), p. 1027-36Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Teaching computers to fold proteins
Winther, O. & Krogh, Anders, 2004, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). Vol. 70 (3) pt. 1, p. 030903Research output: Contribution to journal › Journal article › Research
- Published
The Block Hidden Markov Model for Biological Sequence Analysis
Won, K. J., Prügel-Bennett, A. & Krogh, Anders, 2004, Knowledge-BasedIntelligent Informationand Engineering Systems: 8th International Conference, KES 2004, Proceedings. Negoita, M. G., Howlett, R. J. & Jain, L. (eds.). Springer, Vol. 1. p. 64-70 7 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), Vol. 3213).Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
- Published
Training HMM structure with genetic algorithm for biological sequence analysis
Won, K. J. & Krogh, Anders, 2004, In: Bioinformatics. Vol. 20 (18), p. 3613-9Research output: Contribution to journal › Journal article › Research › peer-review
- 2005
- Published
An HMM posterior decoder for sequence feature prediction that includes homology information
Käll, L., Krogh, Anders & Sonnhammer, E. L. L., 2005, In: Bioinformatics. 21, 1, p. i251 - i257Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Computational evidence for hundreds of non-conserved plant microRNAs
Lindow, M. & Krogh, Anders, 2005, In: BMC Genomics. 6, p. 119Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Evolving hidden Markov models for protein secondary structure prediction
Won, K. J., Hamelryck, Thomas Wim, Prügel-Bennett, A. & Krogh, Anders, 2005, The 2005 IEEE Congress on Evolutionary Computation, IEEE CEC 2005: Proceedings. IEEE, Vol. 3. p. 33-40 8 p.Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
- Published
Large-scale prokaryotic gene prediction and comparison to genome annotation
Nielsen, P. & Krogh, Anders, 2005, In: Bioinformatics. 21, 24, p. 4322-9Research output: Contribution to journal › Journal article › Research › peer-review
- 2006
- Published
A hidden Markov model approach for determining expression from genomic tiling micro arrays
Terkelsen, K. M., Gardner, P. P., Arctander, P. & Krogh, Anders, 2006, In: BMC Bioinformatics. 7, 239Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Automatic generation of gene finders for eukaryotic species
Terkelsen, K. M. & Krogh, Anders, 2006, In: BMC Bioinformatics. 7, 263Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Evolving the structure of hidden Markov Models
won, K. J., Prugel-Bennett, A. & Krogh, Anders, 2006, In: IEEE Transactions on Evolutionary Computation. 10, 1, p. 39-49Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Measuring covariation in RNA alignments: Physical realism improves information measures
Lindgreen, S., Gardner, P. P. & Krogh, Anders, 2006, In: Bioinformatics. 22, 24, p. 2988-2995 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Novel overlapping coding sequences in Chlamydia trachomatis
Jensen, K. T., Petersen, L., Falk, S., Iversen, P., Andersen, P., Theisen, Michael & Krogh, Anders, 2006, In: FEMS Microbiology Reviews. 265, 1, p. 106-17Research output: Contribution to journal › Journal article › Research › peer-review
- Published
PONGO: a web server for multiple predictions of all-alpha transmembrane proteins
Amico, M., Finelli, M., Rossi, I., Zauli, A., Elofsson, A., Viklund, H., Heijne, G. V., Joes, D., Krogh, Anders, Fariselli, P., Luigi, M. P. & Casadio, R., 2006, In: Nucleic Acids Research. 34, p. W169-72Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Sampling Realistic Protein Conformations Using Local Structural Bias
Hamelryck, Thomas Wim, Kent, J. T. & Krogh, Anders, 2006, In: PLoS ONE. 2, 9, p. e131Research output: Contribution to journal › Journal article › Research › peer-review
- 2007
- Published
A code for transcription initiation in mammalian genomes
Frith, M. C., Valen, E. D., Krogh, Anders, Hayashizaki, Y., Carninci, P. & Sandelin, Albin Gustav, 2007, In: Genome Research. 18, 1, p. 1-12 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Advantages of combined transmembrane topology and signal peptide prediction--the Phobius web server.
Käll, L., Krogh, Anders & Sonnhammer, E. L. L., 2007, In: Nucleic Acids Research. 35, Web Server issue, p. W429-32Research output: Contribution to journal › Journal article › Research › peer-review
- Published
An evolutionary method for learning HMM structure: prediction of protein secondary structure.
Won, K., Hamelryck, Thomas Wim, Prügel-Bennett, A. & Krogh, Anders, 2007, In: BMC Bioinformatics. 8, p. 357Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Intragenomic matching reveals a huge potential for miRNA-mediated regulation in plants.
Lindow, M., Jacobsen, A., Nygaard, S., Mang, Y. & Krogh, Anders, 2007, In: PLoS Computational Biology. 3, 11, p. e238Research output: Contribution to journal › Journal article › Research › peer-review
ID: 9738
Most downloads
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6187
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Reconstructing genome evolution in historic samples of the Irish potato famine pathogen
Research output: Contribution to journal › Journal article › Research › peer-review
Published -
3412
downloads
microRNA-146a inhibits G protein-coupled receptor-mediated activation of NF-κB by targeting CARD10 and COPS8 in gastric cancer
Research output: Contribution to journal › Journal article › Research › peer-review
Published -
3325
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Improving ancient DNA read mapping against modern reference genomes
Research output: Contribution to journal › Journal article › Research › peer-review
Published