Marleen de Bruijne

Marleen de Bruijne

Professor


  1. 2012
  2. Published

    Performance of segmentation software on large longitudinal database of pulmonary nodules in the Danish Lung Cancer Screening Trial (DLCST)

    Saghir, Z., Jacobs, C., van Ginneken, B., de Bruijne, Marleen, Dirksen, A. & Pedersen, J. H., 2012, In: European Respiratory Journal. 40, Supplement 56, p. 23s 1 p., P262.

    Research output: Contribution to journalConference abstract in journalResearchpeer-review

  3. Published

    Probability of malignancy based on automatic segmentation and software measurements of nodules in the Danish lung cancer screening trial (DLCST)

    Saghir, Z., Jacobs, C., van Ginneken, B., de Bruijne, Marleen, Dirksen, A. & Pedersen, J. H., 2012, In: European Respiratory Journal. 40, Supplement 56, p. 777s 1 p., P4185.

    Research output: Contribution to journalConference abstract in journalResearchpeer-review

  4. Quantitative imaging biomarkers in neurologic disease: population study perspective

    Niessen, W. J., Vrooman, H. A., de Boer, R., van der Lijn, F., Achterberg, H. C., Koek, M., Klein, S., van der Lugt, A., de Bruijne, Marleen, Ikram, M. A. & Vernooij, M. W., 2012, 2012 9th IEEE International Symposium on Biomedical Imaging (ISBI). IEEE, p. 911 1 p.

    Research output: Chapter in Book/Report/Conference proceedingConference abstract in proceedingsResearchpeer-review

  5. Published

    Regression-based cardiac motion prediction from single-phase CTA

    Metz, C. T., Baka, N., Kirisli, H., Schaap, M., Klein, S., Neefjes, L. A., Mollet, N. R., Lelieveldt, B., de Bruijne, Marleen, Niessen, W. J. & Walsum, T. V., 2012, In: I E E E Transactions on Medical Imaging. 31, 6, p. 1311-1325 15 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  6. Published

    Shape-based assessment of vertebral fracture risk in postmenopausal women using discriminative shape alignment

    Crimi, A., Loog, M., de Bruijne, Marleen, Nielsen, Mads & Lillholm, Martin, 2012, In: Academic Radiology. 19, 4, p. 446-454 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  7. Published

    Standardization of a chest-CT protocol for multi-center trial in cystic fibrosis (CF) infants

    Ciet, P., Graniel, K. G., Stick, S., de Bruijne, Marleen, Tiddens, H. & van Straten, M., 2012, In: Journal of Thoracic Imaging. 27, 5, p. W127 1 p., O47.

    Research output: Contribution to journalConference abstract in journalResearchpeer-review

  8. Published

    Statistical shape model-based femur kinematics from biplane fluoroscopy

    Baka, N., de Bruijne, Marleen, Walsum, T. V., Kaptein, B. L., Giphart, J. E., Schaap, M., Niessen, W. J. & Lelieveldt, B. P. F., 2012, In: I E E E Transactions on Medical Imaging. 31, 8, p. 1573-1583 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  9. Published

    Statistical tracking of tree-like tubular structures with efficient branching detection in 3D medical image data

    Wang, X., Heimann, T., Lo, P., Sumkauskaite, M., Puderbach, M., de Bruijne, Marleen, Meinzer, H. P. & Wegner, I., 2012, In: Physics in Medicine and Biology. 57, 16, p. 5325-5342 18 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  10. Published

    Supervised image segmentation across scanner protocols: a transfer learning approach

    van Opbroek, A., Ikram, M. A., Vernooij, M. W. & de Bruijne, Marleen, 2012, Machine Learning in Medical Imaging: Third International Workshop, MLMI 2012, Held in Conjunction with MICCAI 2012, Nice, France, October 1, 2012, Revised Selected Papers. Wang, F., Shen, D., Yan, P. & Suzuki, K. (eds.). Springer, p. 160-167 8 p. (Lecture notes in computer science, Vol. 7588).

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

  11. Published

    Supervised in-vivo plaque characterization incorporating class label uncertainty

    Engelen, A. V., Niessen, W. J., Klein, S., Groen, H. C., Verhagen, H. J. M., Wentzel, J. J., van der Lugt, A. & de Bruijne, Marleen, 2012, 2012 9th IEEE International Symposium on Biomedical Imaging (ISBI). IEEE, p. 246-249 4 p.

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

  12. Published

    Texture-based analysis of COPD: a data-driven approach

    Sørensen, L., Nielsen, Mads, Lo, P. C. P., Ashraf, H., Pedersen, J. J. H. & de Bruijne, Marleen, 2012, In: I E E E Transactions on Medical Imaging. 31, 1, p. 70-78 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  13. Published

    The relationship between NT proBNP and CT lung density in long term smokers

    Shaker, S. B., Ashraf, H., Rasmussen, T., Lo, P. C. P., de Bruijne, Marleen, Dirksen, A. & Pedersen, J. H., 2012, In: European Respiratory Journal. 40, Supplement 56, p. 103s 1 p., P652.

    Research output: Contribution to journalConference abstract in journalResearchpeer-review

  14. Published

    Three-section expiratory CT: insufficient for trapped air assessment in patients with cystic fibrosis?

    Loeve, M., de Bruijne, Marleen, Hartmann, I. C. J., Straten, M. V., Hop, W. C. J. & Tiddens, H. A. W. M., 2012, In: Radiology. 262, 3, p. 969-976 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  15. Published

    Toward automatic regional analysis of pulmonary function using inspiration and expiration thoracic CT

    Murphy, K., Pluim, J. P. W., Rikxoort, E. M. V., Jong, P. A. D., Hoop, B. D., Gietema, H. A., Mets, O., de Bruijne, Marleen, Lo, P. C. P., Prokop, M. & Ginneken, B. V., 2012, In: Medical Physics. 39, 3, p. 1650-1662 13 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  16. Published

    Towards exaggerated emphysema stereotypes

    Chen, C., Sørensen, L., Lauze, Francois Bernard, Igel, Christian, Loog, M., Feragen, A., de Bruijne, Marleen & Nielsen, Mads, 2012, Medical Imaging 2012: Computer-Aided Diagnosis. van Ginneken, B. & Novak, C. L. (eds.). SPIE - International Society for Optical Engineering, 13 p. 83150Q. (Proceedings of S P I E - International Society for Optical Engineering, Vol. 7964). (Progress in Biomedical Optics and Imaging; No. 31, Vol. 13).

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

  17. 2013
  18. Published

    A transfer-learning approach to image segmentation across scanners by maximizing distribution similarity

    van Opbroek, A., Ikram, M. A., Vernooij, M. W. & de Bruijne, Marleen, 2013, Machine Learning in Medical Imaging: 4th International Workshop, MLMI 2013, held in conjunction with MICCAI 2013, Nagoya, Japan, September 22, 2013. Proceedings. Wu, G., Zhang, D., Shen, D., Yan, P., Suzuki, K. & Wang, F. (eds.). Springer, p. 49-56 8 p. (Lecture notes in computer science, Vol. 8184).

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

  19. Published

    Airway distensibility in chronic obstructive pulmonary disease – evaluation by CT airway segmentation and lung density measurement based on the Danish lung cancer screening trial

    M. W. Wille, M., Petersen, Jens, Dirksen, A., Pedersen, J. J. H. & de Bruijne, Marleen, 2013, In: American Journal of Respiratory and Critical Care Medicine. 187, p. A2871 1 p.

    Research output: Contribution to journalConference abstract in journalResearchpeer-review

  20. Published

    An automatic system for segmentation, matching, anatomical labeling and measurement of airways from CT images

    Petersen, Jens, Feragen, A., Owen, M., Lo, P., Wille, M. M. W., Thomsen, L. H., Dirksen, A. & de Bruijne, Marleen, 2013. 1 p.

    Research output: Contribution to conferencePosterResearchpeer-review

  21. Published

    Automated brain-tissue segmentation by multi-feature SVM classification

    van Opbroek, A., van der Lijn, F. & de Bruijne, Marleen, 2013, The MICCAI Grand Challenge on MR Brain Image Segmentation (MRBrainS13). 8 p. (The MIDAS Journal).

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearch

  22. Published

    Automated measurement of diagnostic angles for hip dysplasia

    de Raedt, S., Mechlenburg, I. B., Stilling, M., Mikkelsen, L. R., Søballe, K. & de Bruijne, Marleen, 2013, Medical Imaging 2013: Computer-Aided Diagnosis. Novak, C. L. & Aylward, S. (eds.). SPIE - International Society for Optical Engineering, 10 p. 867009. (Proceedings of S P I E - International Society for Optical Engineering, Vol. 8670).

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

  23. Published

    Automated segmentation of atherosclerotic histology based on pattern classification

    van Engelen, A., Niessen, W. J., Klein, S., Groen, H. C., van Gaalen, K., Verhagen, H. J., Wentzel, J. J., van der Lugt, A. & de Bruijne, Marleen, 2013, In: Journal of Pathology Informatics. 4, 7 p., 3.

    Research output: Contribution to journalJournal articleResearchpeer-review

  24. Published

    Carotid artery lumen segmentation in 3D free-hand ultrasound images using surface graph cuts

    Lorza, A. M. A., Carvalho, D. D. B., Petersen, Jens, Dijk, A. C. V., Lugt, A. V. D., Niessen, W. J., Klein, S. & de Bruijne, Marleen, 2013, Medical Image Computing and Computer-Assisted Intervention – MICCAI 2013: 16th International Conference, Nagoya, Japan, September 22-26, 2013, Proceedings, Part II. Mori, K., Sakuma, I., Sato, Y., Barillot, C. & Navab, N. (eds.). Springer, p. 542-549 8 p. (Lecture notes in computer science, Vol. 8150).

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

  25. Published

    Carotid artery wall segmentation by coupled surface graph cuts

    Arias, A., Petersen, Jens, van Engelen, A., Tang, H., Selwaness, M., Witteman, J. C. M., van der Lugt, A., Niessen, W. & de Bruijne, Marleen, 2013, Medical Computer Vision. Recognition techniques and applications in medical imaging: Second International MICCAI Workshop, MCV 2012, Nice, France, Revised Selected Papers. Menze, B. H., Langs, G., Lu, L., Montillo, A., Tu, Z. & Criminisi, A. (eds.). Springer, p. 38-47 10 p. (Lecture notes in computer science, Vol. 7766).

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

  26. Published

    Chest computed tomography: a validated surrogate endpoint of cystic fibrosis lung disease?

    Loeve, M., Krestin, G. P., Rosenfeld, M., de Bruijne, Marleen, Stick, S. M. & Tiddens, H. A., 2013, In: European Respiratory Journal. 42, 3, p. 844-857 14 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  27. Chest-CT protocol standardization for multicentre trial in cystic fibrosis (CF) infants

    Ciet, P., Graniel, K. G., Stick, S., de Bruijne, Marleen, Tiddens, H. & Straten, M. V., 2013, In: Insights into Imaging. 4, Supplement 1, 1 p., B-0737.

    Research output: Contribution to journalConference abstract in journalResearchpeer-review

  28. Published

    Efficient nonrigid registration using ranked order statistics

    Tennakoon, R. B., Bab-Hadiashar, A., de Bruijne, Marleen & Cao, Z., 2013, 2013 IEEE 10th International Symposium on Biomedical Imaging (ISBI). IEEE, p. 496-499 4 p. (International Symposium on Biomedical Imaging. Proceedings).

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

  29. Published

    Geometric tree kernels: classification of COPD from airway tree geometry

    Feragen, A., Petersen, Jens, Grimm, D., Dirksen, A., Pedersen, J. J. H., Borgwardt, K. & de Bruijne, Marleen, 2013, Information Processing in Medical Imaging: 23rd International Conference, IPMI 2013, Asilomar, CA, USA, June 28–July 3, 2013. Proceedings. Gee, J. C., Joshi, S., Pohl, K. M., Wells, W. M. & Zöllei, L. (eds.). Springer, p. 171-183 13 p. (Lecture notes in computer science, Vol. 7917).

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

  30. Published

    Iterated stacked classifiers for lung segmentation in computed tomography

    Ciompi, F., Gatta, C. & de Bruijne, Marleen, 2013, The Fifth International Workshop on Pulmonary Image Analysis: Nagoya, Japan - September 26, 2013. Beichel, R. R., de Bruijne, M., Kabus, S., Kiraly, A. P., Kitasaka, T., Kuhnigk, J-M., McClelland, J. R., van Rikxoort, E. & Rit, S. (eds.). CreateSpace Independent Publishing Platform , p. 63-74 12 p.

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

  31. Published

    Local appearance features for robust MRI brain structure segmentation across scanning protocols

    Achterberg, H. C., Poot, D. H. J., van der Lijn, F., Vernooij, M. W., Ikram, M. A., Niessen, W. J. & de Bruijne, Marleen, 2013, Medical Imaging 2013: image processing . Ourselin, S. & Haynor, D. R. (eds.). SPIE - International Society for Optical Engineering, 7 p. 866905. (Progress in Biomedical Optics and Imaging; No. 36, Vol. 14).

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

  32. Published

    Manual airway labeling has limited reproducibility

    Petersen, Jens, Feragen, A., Thomsen, L. H., Wille, M. M. W., Dirksen, A. & de Bruijne, Marleen, 2013. 10 p.

    Research output: Contribution to conferencePosterResearchpeer-review

  33. Published

    Quantification of smoothing requirement for 3D optic flow calculation of volumetric images

    Bab-Hadiashar, A., Tennakoon, R. B. & de Bruijne, Marleen, 2013, In: IEEE Transactions on Image Processing. 22, 6, p. 2128-2137 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  34. Published

    Quantitative airway analysis in longitudinal studies using groupwise registration and 4D optimal surfaces

    Petersen, Jens, Modat, M., Cardoso, M. J., Dirksen, A., Ourselin, S. & de Bruijne, Marleen, 2013, Medical Image Computing and Computer-Assisted Intervention – MICCAI 2013: 16th International Conference, Nagoya, Japan, September 22-26, 2013, Proceedings, Part II. Mori, K., Sakuma, I., Sato, Y., Barillot, C. & Navab, N. (eds.). Springer, Vol. 2. p. 287-294 8 p. (Lecture notes in computer science, Vol. 8150).

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

  35. Published

    Respiratory muscle movement in Pompe disease using cine Magnetic Resonance Imaging

    Ciet, P., Wens, S., Perez-Rovira, A., Logie, K., Wielopolski, P., de Bruijne, Marleen, Ploeg, A. V. D., Doorn, P. V. & Tiddens, H., 2013.

    Research output: Contribution to conferenceConference abstract for conferenceResearchpeer-review

  36. Published

    Scalable kernels for graphs with continuous attributes

    Feragen, A., Kasenburg, N., Petersen, Jens, de Bruijne, Marleen & Borgwardt, K., 2013, 27th Annual Conference on Neural Information Processing Systems 2013: NIPS 2013. Burges, C. J. C., Bottou, L., Welling, M., Ghahramani, Z. & Weinberger, K. Q. (eds.). Curran Associates, Inc., p. 216-224 9 p. (Advances in Neural Information Processing Systems, Vol. 26).

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

  37. Published

    Statistical coronary motion models for 2D + t/3D registration of X-ray coronary angiography and CTA

    Baka, N., Metz, C. T., Schultz, C., Neefjes, L., van Geuns, R. J., Lelieveldt, B. P. F., Niessen, W. J., van Walsum, T. & de Bruijne, Marleen, 2013, In: Medical Image Analysis. 17, 6, p. 698-709 12 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  38. Published

    The Fifth International Workshop on Pulmonary Image Analysis: Nagoya, Japan, September 26, 2013

    Beichel, R. R. (ed.), de Bruijne, Marleen (ed.), Kabus, S. (ed.), Kiraly, A. P. (ed.), Kuhnigk, J. (ed.), McClelland, J. R. (ed.), Kitasaka, T. (ed.), van Rikxoort, E. (ed.) & Rit, S. (ed.), 2013, CreateSpace Independent Publishing Platform . 160 p.

    Research output: Book/ReportBookResearchpeer-review

  39. Published

    The effect of inspiration on airway dimensions measured in CT images from the Danish Lung Cancer Screening Trial

    Petersen, Jens, Wille, M., Thomsen, L., Feragen, A., Dirksen, A. & de Bruijne, Marleen, 2013, In: Insights into Imaging. 4, Supplement 1, p. 183 1 p., B-0163.

    Research output: Contribution to journalConference abstract in journalResearchpeer-review

  40. Published

    The history of bronchiectasis on CT in cystic fibrosis

    Tepper, L. A., de Bruijne, Marleen, Caudri, D., Perez-Rovira, A. & Tiddens, H., 2013, In: Pediatric Pulmonology. 48, S36, p. 354 1 p., 408.

    Research output: Contribution to journalConference abstract in journalResearchpeer-review

  41. Published

    Toward a theory of statistical tree-shape analysis

    Feragen, A., Lo, P. C. P., de Bruijne, Marleen, Nielsen, Mads & Lauze, Francois Bernard, 2013, In: I E E E Transactions on Pattern Analysis and Machine Intelligence. 35, 8, p. 2008-2021 14 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  42. Published

    Tree-space statistics and approximations for large-scale analysis of anatomical trees

    Feragen, A., Owen, M., Petersen, Jens, Wille, M. M. W., Thomsen, L. H., Dirksen, A. & de Bruijne, Marleen, 2013, Information Processing in Medical Imaging: 23rd International Conference, IPMI 2013, Asilomar, CA, USA, June 28–July 3, 2013. Proceedings. Gee, J. C., Joshi, S., Pohl, K. M., Wells, W. M. & Zöllei, L. (eds.). Springer, p. 74-85 12 p. (Lecture notes in computer science, Vol. 7917).

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

  43. 2014
  44. Published

    Atherosclerotic plaque component segmentation in combined carotid MRI and CTA data incorporating class label uncertainty

    van Engelen, A., Niessen, W. J., Klein, S., Groen, H. C., Verhagen, H. J. M., Wentzel, J. J., van der Lugt, A. & de Bruijne, Marleen, 2014, In: PLoS ONE. 9, 4, 14 p., e94840.

    Research output: Contribution to journalJournal articleResearchpeer-review

  45. Published

    Classification of COPD with multiple instance learning

    Cheplygina, V., Sørensen, L. E. B. L., Tax, D., Pedersen, J. J. H., Loog, M. & de Bruijne, Marleen, 2014, 22nd International Conference on Pattern Recognition (ICPR) 2014. IEEE, p. 1508-1513 6 p. (International Conference on Pattern Recognition).

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

  46. Published

    Effect of inspiration on airway dimensions measured in maximal inspiration CT images of subjects without airflow limitation

    Petersen, Jens, Wille, M. M. W., Raket, L. L., Feragen, A., Pedersen, J. H., Nielsen, Mads, Dirksen, A. & de Bruijne, Marleen, 2014, In: European Radiology. 24, 9, p. 2319-2325 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  47. Published

    Evaluation of automated statistical shape model based knee kinematics from biplane fluoroscopy

    Baka, N., Kaptein, B. L., Giphart, J. E., Staring, M., de Bruijne, Marleen, Lelieveldt, B. P. F. & Valstar, E., 2014, In: Journal of Biomechanics. 47, 1, p. 122-129 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  48. Published

    Hippocampal shape is predictive for the development of dementia in a normal, elderly population

    Achterberg, H. C., van der Lijn, F., den Heijer, T., Vernooij, M. W., Ikram, M. A., Niessen, W. J. & de Bruijne, Marleen, 2014, In: Human Brain Mapping. 35, 5, p. 2359-2371 13 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  49. Published

    Learning features for tissue classification with the classification restricted Boltzmann machine

    van Tulder, G. & de Bruijne, Marleen, 2014, Medical Computer Vision: Algorithms for Big Data: International Workshop, MCV 2014, Held in Conjunction with MICCAI 2014, Cambridge, MA, USA, September 18, 2014, Revised Selected Papers. Menze, B., Langs, G., Montillo, A., Kelm, M., Müller, H., Zhang, S., Cai, W. T. & Metaxas, D. (eds.). Springer, p. 47-58 12 p. (Lecture notes in computer science).

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

  50. Published

    Nonrigid registration of volumetric images using ranked order statistics

    Tennakoon, R., Bab-Hadiashar, A., Cao, Z. & de Bruijne, Marleen, 2014, In: I E E E Transactions on Medical Imaging. 33, 2, p. 422-432 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  51. Published

    Optimal surface segmentation using flow lines to quantify airway abnormalities in chronic obstructive pulmonary disease

    Petersen, Jens, Nielsen, Mads, Lo, P. C. P., Nordenmark, L. H., Pedersen, J. J. H., Wille, M. M. W., Dirksen, A. & de Bruijne, Marleen, 2014, In: Medical Image Analysis. 18, 3, p. 531-541 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  52. Published

    Spirometer-controlled cine magnetic resonance imaging to diagnose tracheobronchomalacia in pediatric patients

    Ciet, P., Wielopolski, P., Manniesing, R., Lever, S., de Bruijne, Marleen, Morana, G., Muzzio, P. C., Lequin, M. H. & Tiddens, H. A. W. M., 2014, In: European Respiratory Journal. 43, 1, p. 115-124 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  53. Published

    Three-dimensional carotid ultrasound plaque texture predicts vascular events

    van Engelen, A., Wannarong, T., Parraga, G., Niessen, W. J., Fenster, A., Spence, J. D. & de Bruijne, Marleen, 2014, In: Stroke. 45, p. 2695-2701 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

ID: 545222