Marleen de Bruijne
Professor
Image Analysis, Computational Modelling and Geometry
Universitetsparken 1
2100 København Ø
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3D regression neural network for the quantification of enlarged perivascular spaces in brain MRI
Dubost, F., Adams, H., Bortsova, G., Ikram, M. A., Niessen, W., Vernooij, M. & de Bruijne, Marleen, Jan 2019, In: Medical Image Analysis. 51, p. 89-100Research output: Contribution to journal › Journal article › Research › peer-review
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A Cross-Center Smoothness Prior for Variational Bayesian Brain Tissue Segmentation
Kouw, W. M., Ørting, S. N., Petersen, Jens, Steenstrup Pedersen, Kim & de Bruijne, Marleen, 1 Jan 2019, Information Processing in Medical Imaging : 26th International Conference, IPMI 2019, Proceedings. Bao, S., Chung, A. C. S., Gee, J. C. & Yushkevich, P. A. (eds.). Springer, p. 360-371 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), Vol. 11492 LNCS).Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
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A joint 3D UNet-Graph Neural Network-based method for Airway Segmentation from chest CTs
Juarez, A. G., Selvan, Raghav, Saghir, Zaigham & de Bruijne, Marleen, 22 Aug 2019, Machine Learning in Medical Imaging: 10th International Workshop, MLMI 2019, Held in Conjunction with MICCAI 2019, Shenzhen, China, October 13, 2019, Proceedings. Springer, p. 583-591 (Lecture Notes in Computer Science, Vol. LNCS 11861).Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
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APIR-Net: Autocalibrated Parallel Imaging Reconstruction Using a Neural Network
Zhang, C., Dubost, F., de Bruijne, Marleen, Klein, S. & Poot, D. H. J., 1 Jan 2019, Machine Learning for Medical Image Reconstruction : Second International Workshop, MLMIR 2019 Held in Conjunction with MICCAI 2019 Shenzhen, China, October 17, 2019, Proceedings. Knoll, F., Maier, A., Rueckert, D. & Ye, J. C. (eds.). Springer VS, p. 36-46 11 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), Vol. 11905 LNCS).Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
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Automated 3D segmentation and diameter measurement of the thoracic aorta on non-contrast enhanced CT
Sedghi Gamechi, Z., Bons, L. R., Giordano, M., Bos, D., Budde, R. P. J., Kofoed, Klaus Fuglsang, Pedersen, J. H., Roos-Hesselink, J. W. & de Bruijne, Marleen, 23 Jan 2019, In: European Radiology. 29, 9, p. 4613-4623Research output: Contribution to journal › Journal article › Research › peer-review
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Automated Quantification of Enlarged Perivascular Spaces in Clinical Brain MRI Across Sites
Dubost, F., Dünnwald, M., Huff, D., Scheumann, V., Schreiber, F., Vernooij, M., Niessen, W., Skalej, M., Schreiber, S., Oeltze-Jafra, S. & de Bruijne, Marleen, 2019, OR 2.0 Context-Aware Operating Theaters and Machine Learning in Clinical Neuroimaging - 2nd International Workshop, OR 2.0 2019, and 2nd International Workshop, MLCN 2019, Held in Conjunction with MICCAI 2019, Proceedings. Zhou, L., Sarikaya, D., Kia, S. M., Speidel, S., Malpani, A., Hashimoto, D., Habes, M., Löfstedt, T., Ritter, K. & Wang, H. (eds.). Springer VS, p. 103-111 9 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), Vol. 11796 LNCS).Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
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Automated lesion detection by regressing intensity-based distance with a neural network
van Wijnen, K. M. H., Dubost, F., Yilmaz, P., Ikram, M. A., Niessen, W. J., Adams, H., Vernooij, M. W. & de Bruijne, Marleen, 1 Jan 2019, Medical Image Computing and Computer Assisted Intervention – MICCAI 2019 - 22nd International Conference, Proceedings. Shen, D., Yap, P-T., Liu, T., Peters, T. M., Khan, A., Staib, L. H., Essert, C. & Zhou, S. (eds.). Springer VS, p. 234-242 9 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), Vol. 11767 LNCS).Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
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Deep Multi-instance Volumetric Image Classification with Extreme Value Distributions
Tennakoon, R., Gostar, A. K., Hoseinnezhad, R., de Bruijne, Marleen & Bab-Hadiashar, A., 2019, Computer Vision - ACCV 2018: 14th Asian Conference on Computer Vision, Perth, Australia, December 2–6, 2018, Revised Selected Papers. Li, H., Jawahar, C. V., Mori, G. & Schindler, K. (eds.). Springer, p. 590-604 15 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), Vol. 11363 LNCS).Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
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Enlarged perivascular spaces in brain MRI: Automated quantification in four regions
Dubost, F., Yilmaz, P., Adams, H., Bortsova, G., Ikram, M. A., Niessen, W., Vernooij, M. & de Bruijne, Marleen, 2019, In: NeuroImage. 185, p. 534-544Research output: Contribution to journal › Journal article › Research › peer-review
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Event-Based Modeling with High-Dimensional Imaging Biomarkers for Estimating Spatial Progression of Dementia
for the Alzheimer’s Disease Neuroimaging Initiative, F. A. D. N. I., 2019, Information Processing in Medical Imaging - 26th International Conference, IPMI 2019, Proceedings: 26th International Conference, IPMI 2019, Hong Kong, China, June 2–7, 2019,Proceedings. Bao, S., Chung, A. C. S., Gee, J. C. & Yushkevich, P. A. (eds.). Springer, p. 169-180 12 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), Vol. 11492 LNCS).Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
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Extracting tree structures in CT data by tracking multiple statistically ranked hypotheses
Selvan, Raghav, Petersen, Jens, Pedersen, J. H. & de Bruijne, Marleen, 18 Oct 2019, In: Medical Physics. 46, 10, p. 4431-4440Research output: Contribution to journal › Journal article › Research › peer-review
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Genetic landscape of chronic obstructive pulmonary disease identifies heterogeneous cell-type and phenotype associations
SpiroMeta Consortium, S. C., International COPD Genetics Consortium, I. C. G. C. & Understanding Society Scientific Group, U. S. S. G., 2019, In: Nature Genetics. 51, 3, p. 494-505Research output: Contribution to journal › Journal article › Research › peer-review
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Gray Matter Age Prediction as a Biomarker for Risk of Dementia
Wang, J., Knol, M. J., Tiulpin, A., Dubost, F., de Bruijne, Marleen, Vernooij, M. W., Adams, H. H. H., Ikram, M. A., Niessen, W. J. & Roshchupkin, G. V., 15 Oct 2019, In: Proceedings of the National Academy of Sciences of the United States of America. 116, 42, p. 21213-21218Research output: Contribution to journal › Journal article › Research › peer-review
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Grey Matter Age Prediction as a Biomarker for Risk of Dementia: A Population-based Study
Wang, J., Knol, M., Tiulpin, A., Dubost, F., de Bruijne, Marleen, Vernooij, M., Adams, H., Ikram, M. A., Niessen, W. & Roshchupkin, G., 2019, In: bioRxiv. 17 p., 518506.Research output: Contribution to journal › Journal article › Research
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Hydranet: Data augmentation for regression neural networks
Dubost, F., Bortsova, G., Adams, H., Ikram, M. A., Niessen, W., Vernooij, M. & de Bruijne, Marleen, 1 Jan 2019, Medical Image Computing and Computer Assisted Intervention – MICCAI 2019 - 22nd International Conference, Proceedings. Shen, D., Yap, P-T., Liu, T., Peters, T. M., Khan, A., Staib, L. H., Essert, C. & Zhou, S. (eds.). Springer VS, p. 438-446 9 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), Vol. 11767 LNCS).Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
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Increasing Accuracy of Optimal Surfaces Using Min-marginal Energies
Petersen, Jens, Arias-Lorza, A. M., Selvan, Raghav, Bos, D., van der Lugt, A., Pedersen, J. H., Nielsen, Mads & de Bruijne, Marleen, 1 Jan 2019, In: IEEE Transactions on Medical Imaging. 38, 7, p. 1559-1568 8599009.Research output: Contribution to journal › Journal article › Research › peer-review
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Learning Cross-Modality Representations from Multi-Modal Images
van Tulder, G. & de Bruijne, Marleen, 2019, In: IEEE Transactions on Medical Imaging. 38, 2, p. 638-648Research output: Contribution to journal › Journal article › Research › peer-review
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Multi-task Attention-Based Semi-supervised Learning for Medical Image Segmentation
Chen, S., Bortsova, G., Juárez, A. G. U., van Tulder, G. & de Bruijne, Marleen, 1 Jan 2019, Medical Image Computing and Computer Assisted Intervention – MICCAI 2019 - 22nd International Conference, Proceedings. Shen, D., Yap, P-T., Liu, T., Peters, T. M., Khan, A., Staib, L. H., Essert, C. & Zhou, S. (eds.). Springer VS, p. 457-465 9 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), Vol. 11766 LNCS).Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
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Not-so-supervised: A survey of semi-supervised, multi-instance, and transfer learning in medical image analysis
Cheplygina, V., de Bruijne, Marleen & Pluim, J. P. W., 29 Mar 2019, In: Medical Image Analysis. 54, p. 280-296 17 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Reference values and variation of acetabular angles measured by computed tomography in 170 asymptomatic hips
Mechlenburg, I., Stilling, M., Rømer, L., de Bruijne, Marleen, Søballe, K. & de Raedt, S., 28 Feb 2019, In: Acta Radiologica. 60, 7, p. 895–901Research output: Contribution to journal › Journal article › Research › peer-review
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Semi-supervised Medical Image Segmentation via Learning Consistency Under Transformations
Bortsova, G., Dubost, F., Hogeweg, L., Katramados, I. & de Bruijne, Marleen, 1 Jan 2019, Medical Image Computing and Computer Assisted Intervention – MICCAI 2019 - 22nd International Conference, Proceedings. Shen, D., Yap, P-T., Liu, T., Peters, T. M., Khan, A., Staib, L. H., Essert, C. & Zhou, S. (eds.). Springer VS, p. 810-818 9 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), Vol. 11769 LNCS).Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
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Technical challenges of quantitative chest MRI data analysis in a large cohort pediatric study
Nguyen, A. H., Perez-Rovira, A., Wielopolski, P. A., Hernandez Tamames, J. A., Duijts, L., de Bruijne, Marleen, Aliverti, A., Pennati, F., Ivanovska, T., Tiddens, H. A. W. M. & Ciet, P., 2019, In: European Radiology. 29, 6, p. 2770–2782Research output: Contribution to journal › Journal article › Research › peer-review
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The value of hippocampal volume, shape, and texture for 11-year prediction of dementia: a population-based study
Achterberg, H. C., Sørensen, L., Wolters, F. J., Niessen, W. J., Vernooij, M. W., Ikram, M. A., Nielsen, Mads & de Bruijne, Marleen, 2019, In: Neurobiology of Aging. 81, p. 58-66Research output: Contribution to journal › Journal article › Research › peer-review
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Transfer Learning for Image Segmentation by Combining Image Weighting and Kernel Learning
van Opbroek, A., Achterberg, H. C., Vernooij, M. W. & de Bruijne, Marleen, 2019, In: IEEE Transactions on Medical Imaging. 38, 1, p. 213-224 8419778.Research output: Contribution to journal › Journal article › Research › peer-review
ID: 545222
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Evaluation of registration methods on thoracic CT: the EMPIRE10 challenge
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2336
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Atherosclerotic plaque component segmentation in combined carotid MRI and CTA data incorporating class label uncertainty
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2146
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Distribution, size, shape, growth potential and extent of abdominal aortic calcified deposits predict mortality in postmenopausal women
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