Abraham George Smith
Postdoc
Image Analysis, Computational Modelling and Geometry
Universitetsparken 1
2100 København Ø
- 2024
- Published
Deep-learning versus greyscale segmentation of voids in X-ray computed tomography images of filament-wound composites
Upadhyay, S., Smith, Abraham George, Vandepitte, D., Lomov, S. V., Swolfs, Y. & Mehdikhani, M., 2024, In: Composites Part A: Applied Science and Manufacturing. 177, 107937.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Toward improved image-based root phenotyping: Handling temporal and cross-site domain shifts in crop root segmentation models
Banet, T., Smith, Abraham George, McGrail, R., McNear, D. H. & Poffenbarger, H., 2024, In: Plant Phenome Journal. 7, 1, 11 p., e20094.Research output: Contribution to journal › Journal article › Research › peer-review
- 2023
- Published
Damage identification in 4D images of a nano-engineered composite via a deep-learning tool
Mehdikhani, M., Upadhyay, S., Soete, J., Swolfs, Y., Smith, Abraham George, Ali Aravand, M., Liotta, A. H., Wicks, S. S., Wardle, B. L., Lomov, S. V. & Gorbatikh, L., 2023, Proceedings of 23rd International Conference on Composite Materials, ICCM 2023. Falzon, B. & McCarthy, C. (eds.). Queen's University Belfast, 547Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research
- Published
Deep-Learning Image Segmentation with Corrective Annotation
Smith, Abraham George, 2023, Department of Computer Science, University of Copenhagen. 135 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
Interfractional dose accumulation for MR-guided liver SBRT: Variation among algorithms is highly patient- and fraction-dependent
Wahlstedt, I., Smith, Abraham George, Andersen, C. E., Behrens, C. P., Nørring Bekke, S., Boye, K., van Overeem Felter, M., Josipovic, Mirjana, Petersen, Jens, Risumlund, S. L., Tascón-Vidarte, J. D., van Timmeren, J. E. & Vogelius, Ivan R. , 2023, In: Radiotherapy and Oncology. 182, 9 p., 109448.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Prediction of Radiation-induced Lymphopenia following Exposure of the Thoracic Region and Associated Risk of Infections and Mortality
Terrones-Campos, C., Ledergerber, B., Forbes, N., Smith, Abraham George, Petersen, Jens, Helleberg, Marie, Lundgren, Jens, Specht, Lena & Vogelius, Ivan R. , 2023, In: Clinical Oncology. 35, 7, p. e434-e444 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Semantic segmentation of plant roots from RGB (mini-) rhizotron images—generalisation potential and false positives of established methods and advanced deep-learning models
Baykalov, P., Bussmann, B., Nair, R., Smith, Abraham George, Bodner, G., Hadar, O., Lazarovitch, N. & Rewald, B., 2023, In: Plant Methods. 19, 1, 15 p., 122.Research output: Contribution to journal › Journal article › Research › peer-review
- 2022
- Published
Assessing the fine root growth dynamics of Norway spruce manipulated by air humidity and soil nitrogen with deep learning segmentation of smartphone images
Sell, M., Smith, Abraham George, Burdun, I., Rohula-Okunev, G., Kupper, P. & Ostonen, I., 2022, In: Plant and Soil. 480, p. 135–150Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Comparing the deep root growth and water uptake of intermediate wheatgrass (Kernza®) to alfalfa
Clément, C., Sleiderink, J., Svane, Simon Fiil, Smith, Abraham George, Diamantopoulos, E., Dresbøll, Dorte Bodin & Thorup-Kristensen, Kristian, 2022, In: Plant and Soil. 472, p. 369–390Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Deep learning with multisite data reveals the lasting effects of soil type, tillage and vegetation history on biopore genesis
Han, Eusun, Kirkegaard, J. A., White, R., Smith, Abraham George, Thorup-Kristensen, Kristian, Kautz, T. & Athmann, M., 2022, In: Geoderma. 425, 12 p., 116072.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Deep-Learning Detection of Cracks in In-Situ Computed Tomograms of Nano-Engineered Composites
Mehdikhani, M., Upadhyay, S., Soete, J., Swolfs, Y., Smith, Abraham George, Aravand, M. A., Liotta, A. H., Wicks, S. S., Wardle, B. L., Lomov, S. V. & Gorbatikh, L., 2022, Proceedings of the American Society for Composites - 37th Technical Conference, ASC 2022. Zhupanska, O. & Madenci, E. (eds.). DEStech Publications, Inc.Research output: Chapter in Book/Report/Conference proceeding › Conference abstract in proceedings › Research › peer-review
- Published
Dynamics of Deep Water and N Uptake of Oilseed Rape (Brassica napus L.) Under Varied N and Water Supply
Chen, G., Rasmussen, C. R., Dresbøll, Dorte Bodin, Smith, Abraham George & Thorup-Kristensen, Kristian, 2022, In: Frontiers in Plant Science. 13, p. 1-15 866288.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Gating has a negligible impact on dose delivered in MRI-guided online adaptive radiotherapy of prostate cancer
Wahlstedt, I., Andratschke, N., Behrens, C. P., Ehrbar, S., Gabryś, H. S., Schüler, H. G., Guckenberger, M., Smith, Abraham George, Tanadini-Lang, S., Tascón-Vidarte, J. D., Vogelius, Ivan R. & van Timmeren, J. E., 2022, In: Radiotherapy and Oncology. 170, p. 205-212Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Gating has small impact on dose to OARs and PTV coverage in MR-guided daily ART of prostate cancer
Wahlstedt, I., Andratschke, N., Behrens, C. P., Ehrbar, S., Gabrys, H. S., Schueler, H. G., Guckenberger, M., Smith, Abraham George, Tanadini-Lang, S., Tascon-Vidarte, J. D., Vogelius, Ivan R. & van Timmeren, J. E., 2022, In: Radiotherapy and Oncology. 170, p. S15-S16Research output: Contribution to journal › Conference abstract in journal › Research › peer-review
- Published
Relative importance of genotype, gene expression, and DNA methylation on complex traits in perennial ryegrass
Malinowska, M., Ruud, A. K., Jensen, J., Svane, Simon Fiil, Smith, Abraham George, Bellucci, A., Lenk, I., Nagy, I., Fois, M., Didion, T., Thorup-Kristensen, Kristian, Jensen, C. S. & Asp, T., 2022, In: Plant Genome. 15, 4, 17 p., e20253.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
RootPainter: deep learning segmentation of biological images with corrective annotation
Smith, Abraham George, Han, Eusun, Petersen, Jens, Olsen, N. A. F., Giese, C., Athmann, M., Dresbøll, Dorte Bodin & Thorup-Kristensen, Kristian, 2022, In: New Phytologist. 236, p. 774-791 18 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
RootPainter3D: Interactive-machine-learning enables rapid and accurate contouring for radiotherapy
Smith, Abraham George, Petersen, Jens, Terrones-Campos, C., Berthelsen, A. K., Forbes, N. J., Darkner, Sune, Specht, Lena & Vogelius, I. R., 2022, In: Medical Physics. 49, 1, p. 461-473Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Semifield root phenotyping: Root traits for deep nitrate uptake
Wacker, Tomke Susanne, Popovic, O., Olsen, N. A. F., Markussen, Bo, Smith, Abraham George, Svane, Simon Fiil & Thorup-Kristensen, Kristian, 2022, In: Plant, Cell and Environment. 45, 3, p. 823-836Research output: Contribution to journal › Journal article › Research › peer-review
- 2021
- Published
Developing and validating COVID-19 adverse outcome risk prediction models from a bi-national European cohort of 5594 patients
Jimenez-Solem, E., Petersen, T. S., Hansen, C., Hansen, C., Lioma, C., Igel, C., Boomsma, W., Krause, O., Lorenzen, S., Selvan, R., Petersen, J., Nyeland, M. E., Ankarfeldt, M. Z., Virenfeldt, G. M., Winther-Jensen, M., Linneberg, A., Ghazi, M. M., Detlefsen, N., Lauritzen, A. D., Smith, A. G. & 15 others, , 2021, In: Scientific Reports. 11, 1, 12 p., 3246.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Digging roots is easier with AI
Han, Eusun, Smith, Abraham George, Kemper, R., White, R., Kirkegaard, J., Thorup-Kristensen, Kristian & Athmann, M., 2021, In: Journal of Experimental Botany. 72, 13, p. 4680-4690Research output: Contribution to journal › Journal article › Research › peer-review
- 2020
- Published
Segmentation of roots in soil with U-Net
Smith, Abraham George, Petersen, Jens, Selvan, Raghav & Rasmussen, Camilla Ruø, 2020, In: Plant Methods. 16, p. 1-15 13.Research output: Contribution to journal › Journal article › Research › peer-review
ID: 202363390
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Developing and validating COVID-19 adverse outcome risk prediction models from a bi-national European cohort of 5594 patients
Research output: Contribution to journal › Journal article › Research › peer-review
Published -
189
downloads
Segmentation of roots in soil with U-Net
Research output: Contribution to journal › Journal article › Research › peer-review
Published -
49
downloads
RootPainter: deep learning segmentation of biological images with corrective annotation
Research output: Contribution to journal › Journal article › Research › peer-review
Published