Sune Darkner

Sune Darkner

Associate Professor


  1. 2017
  2. Published

    3D estimation of synaptic vesicle distributions in serial section transmission electron microscopy

    Khanmohammadi, M., Darkner, Sune, Nava, N., Nyengaard, J. R., Wegener, G., Popoli, M. & Sporring, Jon, 2017, In: Journal of Microscopy. 265, 1, p. 101–110 1 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  3. Published

    A statistical model for simultaneous template estimation, bias correction, and registration of 3D brain images

    Pai, A. S. U., Sommer, Stefan Horst, Raket, L. L., Kühnel, L., Darkner, Sune, Sørensen, L. & Nielsen, Mads, 2017, Medical Computer Vision and Bayesian and Graphical Models for Biomedical Imaging: MICCAI 2016 International Workshops, MCV and BAMBI, Athens, Greece, October 21, 2016, Revised Selected Papers. Müller, H., Kelm, B. M., Arbel, T., Cai, W., Cardoso, M. J., Langs, G., Menze, B., Metaxas, D., Montillo, A., Wells, W. M., Zhang, S., Chung, A. C. S., Jenkinson, M. & Ribbens, A. (eds.). Springer, p. 151-159 9 p. (Lecture notes in computer science, Vol. 10081).

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

  4. Published

    First-in-man mesenchymal stem cells for radiation-induced xerostomia (MESRIX): study protocol for a randomized controlled trial.

    Grønhøj, C., Jensen, D. H., Glovinski, P. V., mpw981, M., Jensen, A. B., Oliveri, R. S., Specht, Lena, Thomsen, C., Darkner, Sune, Kiss, K., Fischer-Nielsen, A. & von Buchwald, Christian, 2017, In: Trials. 18, 1, 10 p., 108.

    Research output: Contribution to journalJournal articleResearchpeer-review

  5. 2016
  6. Published

    The minimal energetic requirement of sustained awareness after brain injury

    Stender, J., Mortensen, K. N., Thibaut, A., Darkner, Sune, Laureys, S., Gjedde, Albert & Kupers, Ron, 6 Jun 2016, In: Current Biology. 26, 11, p. 1494-1499 6 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  7. Published

    Combining the boundary shift integral and tensor-based morphometry for brain atrophy estimation

    Michalkiewicz, M. D., Pai, A. S. U., Leung, K. K., Sommer, Stefan Horst, Darkner, Sune, Sørensen, L., Sporring, Jon & Nielsen, Mads, 2016, Medical imaging 2016: Image processing. Styner, M. A. & Angelini, E. D. (eds.). SPIE - International Society for Optical Engineering, 6 p. 978406. (Progress in Biomedical Optics and Imaging).

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

  8. Published

    Deformation-based atrophy computation by surface propagation and its application to Alzheimer’s disease

    Pai, A. S. U., Sporring, Jon, Darkner, Sune, Dam, Erik Bjørnager, Lillholm, Martin, Jørgensen, D., Oh, J., Chen, G., Suhy, J., Sørensen, L. & Nielsen, Mads, 2016, In: SPIE Journal of Medical Imaging. 3, 1, 11 p., 014005.

    Research output: Contribution to journalJournal articleResearchpeer-review

  9. Published

    Finding significantly connected voxels based on histograms of connection strengths

    Kasenburg, N., Pedersen, M. V. & Darkner, Sune, 2016, Medical Imaging 2016: Image Processing. Styner, M. A. & Angelini, E. D. (eds.). SPIE - International Society for Optical Engineering, 7 p. 978431. (Progress in Biomedical Optics and Imaging; No. 39, Vol. 17).

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

  10. Published

    Kernel bundle diffeomorphic image registration using stationary velocity fields and Wendland basis functions

    Pai, A. S. U., Sommer, Stefan Horst, Sørensen, L., Darkner, Sune, Sporring, Jon & Nielsen, Mads, 2016, In: IEEE Transactions on Medical Imaging. 35, 6, p. 1369-1380 12 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  11. Published

    Structural parcellation of the thalamus using shortest-path tractography

    Kasenburg, N., Darkner, Sune, Hahn, U., Liptrot, M. G. & Feragen, A., 2016, 2016 IEEE 13th International Symposium on Biomedical Imaging (ISBI). IEEE, p. 559-563 5 p. 7493330

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

  12. 2015
  13. Published

    Adaptive time-stepping in dieomorphic image registration with bounded inverse consistency error

    Pai, A. S. U., Klein, S., Sommer, Stefan Horst, Sørensen, L., Darkner, Sune, Sporring, Jon & Nielsen, Mads, 2015, Proceedings of the fifth international workshop on Mathematical Foundations of Computational Anatomy (MFCA 2015) . INRIA, p. 35-47

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

ID: 18038443