Mads Nielsen

Mads Nielsen

Professor


  1. Published

    A novel and automatic mammographic texture resemblance marker is an independent risk factor for breast cancer

    Nielsen, Mads, Karemore, G., Loog, M., Raundahl, J., Karssemeijer, N., Otten, J. D. M., Karsdal, M. A., Vachon, C. M. & Christiansen, C., 2011, In: Cancer Epidemiology. 35, 4, p. 381–387 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  2. Published

    Binocular dense depth reconstruction using isotropy constraint

    Nielsen, Mads & Deriche, R., 1995, In: Theory and Applications of Image Processing IIG. Borgefors, Ed. p. 127-140 14 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  3. Published

    Distribution, size, shape, growth potential and extent of abdominal aortic calcified deposits predict mortality in postmenopausal women

    Nielsen, Mads, Ganz, Melanie, Lauze, Francois Bernard, Pettersen, P. C., de Bruijne, Marleen, Clarkson, T. B., Dam, E. B., Christiansen, C. & Karsdal, M. A., 2010, In: BMC Cardiovascular Disorders. 10, 10 p., 56.

    Research output: Contribution to journalJournal articleResearchpeer-review

  4. Guest editorial: Special issue on statistics of shapes and textures

    Nielsen, Mads, Hansen, L. K., Johansen, P. & Sporring, J., 2002, In: Journal of Mathematical Imaging and Vision. 17, 2, p. 87-87 1 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  5. Binocular stereo from grey-scale images

    Nielsen, Mads, Maas, R., Niessen, W. J., Florack, L. L. & Romeny, B. M. T. H., 1999, In: Journal of Mathematical Imaging and Vision. 10, 2, p. 103-122 20 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  6. Koenderink corner points

    Nielsen, Mads, Olsen, O. F., Sig, M. & Sigurd, M., 2001, Visual Form 2001. Springer Science+Business Media, p. 420-430 11 p.

    Research output: Chapter in Book/Report/Conference proceedingBook chapterResearchpeer-review

  7. Published

    Graduated Non-Convexity by Smoothness Focusing

    Nielsen, Mads, 1993, Proc. of 4th BMVC. Guildford, England

    Research output: Chapter in Book/Report/Conference proceedingBook chapterResearch

  8. Published

    Distribution, size, and shape of abdominal aortic calcified deposits and their relationship to mortality in postmenopausal women

    Nielsen, Mads, Ganz, Melanie, de Bruijne, Marleen, Dam , E., Karsdal , M. & Christiansen , C., 2011. 1 p.

    Research output: Contribution to conferenceConference abstract for conferenceResearchpeer-review

  9. The structure of the optic flow field

    Nielsen, Mads & Olsen, O. F., 1998, Computer Vision—ECCV’98. Springer Science+Business Media, p. 271-287 17 p.

    Research output: Chapter in Book/Report/Conference proceedingBook chapterResearchpeer-review

  10. Published

    Guest Editorial: Statistics of Shapes and Textures

    Nielsen, Mads, Hansen, L. K., Johansen, P. & Sporring, Jon, 2002, In: Journal of Mathematical Imaging and Vision. 17, 2, p. 87

    Research output: Contribution to journalEditorialResearch

  11. Brownian Warps: A least committed prior for non-rigid registration

    Nielsen, Mads, Johansen, P., Lautrup, B. & Jackson, A. D., 2002, Medical Image Computing and Computer-Assisted Intervention — MICCAI: 5th International Conference Tokyo, Japan, September 25–28, 2002 Proceedings, Part II. Springer, p. 557-564 (Lecture notes in computer science, Vol. 2489/2002).

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

  12. Graduated nonconvexity by functional focusing

    Nielsen, Mads, 1997, In: Pattern Analysis and Machine Intelligence, IEEE Transactions on. 19, 5, p. 521-525 5 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  13. What do features tell about images?

    Nielsen, Mads & Lillholm, Martin, 2001, Scale-Space and Morphology in Computer Vision: Third International Conference, Scale-Space 2001 Vancouver, Canada, July 7–8, 2001 Proceedings. Kerckhove, M. (ed.). Springer, p. 39-50 12 p. (Lecture notes in computer science, Vol. 2106).

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

  14. Published

    Special Issue on Statistics of Shapes and Textures

    Nielsen, Mads (ed.), Hansen, L. K. (ed.), Johansen, P. (ed.) & Sporring, Jon (ed.), 2002, (Journal of Mathematical Imaging and Vision; No. 2, Vol. 17).

    Research output: Book/ReportAnthologyResearch

  15. A PDE Solution of Brownian Warping

    Nielsen, Mads & Johansen, P., 2004, Computer Vision - ECCV 2004: 8th European Conference on Computer Vision, Prague, Czech Republic, May 11-14, 2004. Proceedings, Part IV. <Forlag uden navn>, p. 180-191 (Lecture notes in computer science, Vol. 3024/2004).

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

  16. Published

    Mammographic texture resemblance generalizes as an independent risk factor for breast cancer

    Nielsen, Mads, Vachon, C. M., Scott, C. G., Chernoff, K., Karemore, G., Karssemeijer, N., Lillholm, Martin & Karsdal, M., 2014, In: Breast Cancer Research (Online Edition). 16, 2, 8 p., R37.

    Research output: Contribution to journalJournal articleResearchpeer-review

  17. Published

    Ninth International Conference on Mecial Image Computing and Computer-Assisted Interventions, MICCAI 2006: Editorial

    Nielsen, Mads & Hawkes, D., 2007, In: Medical Image Analysis. 11, 5, p. 415-417

    Research output: Contribution to journalEditorialResearch

  18. Feature displacement interpolation

    Nielsen, Mads & Andresen, P. R., 1998, Image Processing, 1998. ICIP 98. Proceedings. 1998 International Conference on. p. 208-212 5 p.

    Research output: Chapter in Book/Report/Conference proceedingBook chapterResearchpeer-review

  19. Meeting and Workshop-assessment of progress and results

    Nielsen, Mads, Olsen, O. F. & Dahl, G., 2003, In: DSSCV.

    Research output: Contribution to journalJournal articleResearchpeer-review

  20. Scale-space generators and functionals

    Nielsen, Mads, 1997, Gaussian Scale-Space Theory. Springer Science+Business Media, p. 99-114 16 p.

    Research output: Chapter in Book/Report/Conference proceedingBook chapterResearchpeer-review

  21. Published

    Determination of higher order optic flow: A group theoretical approach

    Nielsen, Mads & Sporring, Jon, 1994, København: DIKU. (Department of Computer Science. University of Copenhagen. Technical Report; No. 34, Vol. 94).

    Research output: Book/ReportReportResearch

  22. Published

    Breast density changes associated with postmenopausal hormone replacement therapy: post hoc radiologist- and computer-based analyses.

    Nielsen, Mads, Pettersen, P., Alexandersen, P., Karemore, G., Raundahl, J., Loog, M. & Christiansen, C., 2010, In: Menopause . 17, 4, p. 772-778 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  23. Preface

    Nielsen, Mads, 2005, Deep Structure, Singularities, and Computer Vision. <Forlag uden navn>, p. VI (Lecture notes in computer science, Vol. 3753/2005).

    Research output: Chapter in Book/Report/Conference proceedingPreface/postscriptResearch

  24. Published

    Medical Image Computing and Computer-Assisted Intervention -MICCAI 2006 Part I: 9th international conference , Copenhagen, Denmark, October 1-6, 2006, proceedings, Part I

    Nielsen, Mads (ed.), Sporring, Jon (ed.) & Larsen, R. (ed.), 2006, Springer. 949 p. (Lecture notes in computer science; No. 4190).

    Research output: Book/ReportAnthologyResearch

  25. Published

    Hippocampal texture predicts ad conversion in amyloid positive mild cognitively impaired subjects

    Nielsen, Mads, Igel, Christian & Sørensen, L., 2015, In: Neurodegenerative Diseases. 15, Suppl. 1, p. 262 1 p., ADPD5-0947.

    Research output: Contribution to journalConference abstract in journalResearch

  26. On the duality of scalar and density flows

    Nielsen, Mads, Niessen, W., Maas, R., Florack, L. & ter Haar Romeny, B., 1997, Scale-Space Theory in Computer Vision. Springer Science+Business Media, p. 65-76 12 p.

    Research output: Chapter in Book/Report/Conference proceedingBook chapterResearchpeer-review

  27. Scale-Space Theorics in Computer Vision, Lecture Notes in Computer Science, Vol. 1682

    Nielsen, Mads, Johansen, P. & Olsen, O. F., 1999, Springer Science+Business Media.

    Research output: Book/ReportBookResearchpeer-review

  28. Published

    Relevance sampling

    Nielsen, Mads, Markussen, Bo & Loog, M., 2015, Proceedings of the Eight Workshop on Information Theoretic Methods in Science and Engineering. Rissanen, J., Harremoës, P., Forchhammer, S., Roos, T. & Myllymäki, P. (eds.). Department of Computer Science, University of Helsinki , p. 35-38 4 p. (Series of Publications B, Vol. B-2015-1).

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

  29. Published

    Extraction of G-quadruplex ligands from disulfide-based dynamic combinatorial libraries

    Nielsen, Mads & Ulven, Trond, 2009, p. ORGN-345.

    Research output: Contribution to conferenceConference abstract for conferenceResearchpeer-review

  30. Multiscale approach to image sequence analysis

    Niessen, W. J., Duncan, J. S., Nielsen, Mads, Florack, L., ter Haar Romeny, B. M. & Viergever, M. A., 1997, In: Computer Vision and Image Understanding. 65, 2, p. 259-268 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  31. Published

    Convolutional neural networks for segmentation and object detection of human semen

    Nissen, M. S., Krause, Oswin, Almstrup, Kristian, Kjærulff, S., Nielsen, T. T. & Nielsen, Mads, 2017, Image Analysis: 20th Scandinavian Conference, SCIA 2017, Tromsø, Norway, June 12–14, 2017, Proceedings, Part I. Sharma, P. & Bianchi, F. M. (eds.). Springer, Vol. Part 1. p. 397-406 10 p. (Lecture notes in computer science, Vol. 10269).

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

  32. Published

    Reconstruction of Optical Thickness

    Olsen, N. H., Sporring, Jon & Nielsen, Mads, 2002, Proceedings fra den 11. Danske Konference om Mønstergenkendelse og Billedanalyse. Department of Computer Science, University of Copenhagen, p. 114-126

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearch

  33. Published

    Reconstruction of Optical Thickness from Hoffman Modulation Contrast Images

    Olsen, N. H., Sporring, Jon, Nielsen, Mads, Hnida, C. & Ziebe, S., 2003, Image Analysis: 13th Scandinavian Conference, SCIA 2003 Halmstad, Sweden, June 29 – July 2, 2003 Proceedings. Springer, p. 445-454 (Lecture notes in computer science, Vol. 2749/2003).

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

  34. Lie group modeling of nonlinear point set shape variability

    Olsen, N. H. & Nielsen, Mads, 2000, Algebraic Frames for the Perception-Action Cycle. Springer Science+Business Media, p. 259-268 10 p.

    Research output: Chapter in Book/Report/Conference proceedingBook chapterResearchpeer-review

  35. Generic events for the gradient squared. Proc. 1 st Scale Space Conference

    Olsen, O. & Nielsen, Mads, 1997, Generic events for the gradient squared. Proc. 1 st Scale Space Conference. p. 101-112 12 p. (Lecture notes in computer science).

    Research output: Chapter in Book/Report/Conference proceedingBook chapterResearchpeer-review

  36. Multi-scale gradient magnitude watershed segmentation

    Olsen, O. F. & Nielsen, Mads, 1997, Image Analysis and Processing. Springer Science+Business Media, p. 6-13 8 p.

    Research output: Chapter in Book/Report/Conference proceedingBook chapterResearchpeer-review

  37. The Generic Structure of the Optic Flow Field

    Olsen, O. F. & Nielsen, Mads, 2006, In: Journal of Mathematical Imaging and Vision. 24, 1, p. 37-53

    Research output: Contribution to journalJournal articleResearchpeer-review

  38. Published

    PADDIT: Probabilistic Augmentation of Data using Diffeomorphic Image Transformation

    Orbes-Arteaga, M., Sørensen, L., Cardoso , J., Modat , M., Ourselin, S., Sommer, Stefan Horst, Nielsen, Mads, Igel, Christian & Pai, A. S. U., 2019, Proceedings, SPIE 10949, Medical Imaging 2019: Image Processing . SPIE - International Society for Optical Engineering, 6 p.

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

  39. Published

    Augmentation based unsupervised domain adaptation

    Orbes-Arteaga, M., Varsavsky, T., Sørensen, L., Nielsen, Mads, Pai, A. S. U., Ourselin, S., Modat , M. & Cardoso, M. J., 2022, arXiv.org, 12 p.

    Research output: Working paperPreprintResearch

  40. Published

    Simultaneous synthesis of FLAIR and segmentation of white matter hypointensities from T1 MRIs

    Orbes-Arteaga, M., Cardoso, M. J., Sørensen, L., Modat, M., Ourselin, S., Nielsen, Mads & Pai, A. S. U., 2018. 8 p.

    Research output: Contribution to conferencePaperResearch

  41. Published

    Knowledge Distillation for Semi-supervised Domain Adaptation

    Orbes-Arteaga, M., Cardoso, J., Sørensen, L., Igel, Christian, Ourselin, S., Modat, M., Nielsen, Mads & Pai, A., 1 Jan 2019, OR 2.0 Context-Aware Operating Theaters and Machine Learning in Clinical Neuroimaging - 2nd International Workshop, OR 2.0 2019, and 2nd International Workshop, MLCN 2019, Held in Conjunction with MICCAI 2019, Proceedings. Zhou, L., Sarikaya, D., Kia, S. M., Speidel, S., Malpani, A., Hashimoto, D., Habes, M., Löfstedt, T., Ritter, K. & Wang, H. (eds.). Springer VS, p. 68-76 9 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), Vol. 11796 LNCS).

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

  42. Published

    Multi-domain adaptation in brain MRI through paired consistency and adversarial learning

    Orbes-Arteaga, M., Varsavsky, T., Sudre, C. H., Eaton-Rosen, Z., Haddow, L. J., Sørensen, L., Nielsen, Mads, Pai, A., Ourselin, S., Modat, M., Nachev, P. & Cardoso, M. J., 2019, Domain Adaptation and Representation Transfer and Medical Image Learning with Less Labels and Imperfect Data First MICCAI Workshop, DART 2019 and First International Workshop, MIL3ID 2019 Shenzhen, Held in Conjunction with MICCAI 2019 Shenzhen, 2019 Proceedings. Wang, Q., Milletari, F., Rieke, N., Nguyen, H. V., Roysam, B., Albarqouni, S., Cardoso, M. J., Xu, Z., Kamnitsas, K., Patel, V., Jiang, S., Zhou, K., Luu, K. & Le, N. (eds.). Springer VS, p. 54-62 9 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), Vol. 11795 LNCS).

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

  43. Published

    Subclinical depressive symptoms during late midlife and structural brain alterations: A longitudinal study of Danish men born in 1953

    Osler, Merete, Sørensen, L., Rozing, M., Calvo, O. P., Nielsen, Mads & Rostrup, E., Apr 2018, In: Human Brain Mapping. 39, 4, p. 1789-1795

    Research output: Contribution to journalJournal articleResearchpeer-review

  44. Published

    Do dementia biomarkers have a sigmoid trajectory? Insights from non-linear mixed effects modeling

    Pai, A. S. U., Sommer, Stefan Horst, Raket, L. L., Sørensen, L. & Nielsen, Mads, 2016, In: Alzheimer's & Dementia. 12, 7, Supplement, p. P356 1 p., O4-09-06.

    Research output: Contribution to journalConference abstract in journalResearchpeer-review

  45. Published

    White matter hypointensity growth rate correlates with rate of brain atrophy

    Pai, A. S. U., Sørensen, L., Darkner, Sune, Sporring, Jon, Rostrup, E. & Nielsen, Mads, 2014, In: Alzheimer's & Dementia. 10, 4, Supplement, p. P414 1 p., P1-285.

    Research output: Contribution to journalConference abstract in journalResearchpeer-review

  46. Published

    Image registration using stationary velocity fields parameterized by norm-minimizing Wendland kernel

    Pai, A. S. U., Sommer, Stefan Horst, Sørensen, L., Darkner, Sune, Sporring, Jon & Nielsen, Mads, 2015, Medical Imaging 2015: Image Processing. SPIE - International Society for Optical Engineering, 7 p. (Proceedings of S P I E - International Society for Optical Engineering, Vol. 9413).

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

  47. Published

    Diffeomorphic image registration with automatic time-step adjustment

    Pai, A. S. U., Klein, S., Sommer, Stefan Horst, Darkner, Sune, Sporring, Jon & Nielsen, Mads, 2015, 2015 IEEE 12th International Symposium on Biomedical Imaging (ISBI). IEEE, p. 1085-1088 4 p.

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

  48. Published

    Comparison of several computational pipelines for atrophy computation in longitudinal Alzheimers studies

    Pai, A. S. U., Sommer, Stefan Horst, Darkner, Sune, Sørensen, L. E. B. L., Sporring, Jon & Nielsen, Mads, 2015. 1 p.

    Research output: Contribution to conferenceConference abstract for conferenceResearchpeer-review

  49. Published

    Evaluation of bias in brain atrophy estimation

    Pai, A. S. U., Darkner, Sune, Sørensen, L., Erleben, L. L., Mysling, P., Sporring, Jon, Dam, E. & Nielsen, Mads, 2012, NIBAD '12: MICCAI 2012 Workshop on Novel Imaging Biomarkers for Alzheimer’s Disease and Related Disorders. Wang, L., Yushkevich, P. & Ourselin, S. (eds.). MICCAI , p. 198-206 9 p.

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

  50. Published

    Characterization of errors in deep learning-based brain MRI segmentation

    Pai, A. S. U., Teng, Y., Blair, J. P. M., Kallenberg, M. G. J., Dam, Erik Bjørnager, Sommer, Stefan Horst, Igel, Christian & Nielsen, Mads, 2017, Deep learning for medical image analysis. Zhou, S. K., Greenspan, H. & Shen, D. (eds.). Academic Press, p. 223–242 20 p.

    Research output: Chapter in Book/Report/Conference proceedingBook chapterResearchpeer-review

  51. Published

    Localized cerebral atrophy acceleration during Alzheimer’s disease

    Pai, A. S. U., Sørensen, L., Darkner, Sune, Lillholm, Martin, Dam, E. B., Sporring, Jon & Nielsen, Mads, 2013, In: Alzheimer's & Dementia. 9, 4, Supplement, p. P151 1 p., O1-10-06.

    Research output: Contribution to journalConference abstract in journalResearchpeer-review

  52. Published

    Hippocampal texture predicts rate of cognitive decline in mild cognitive impairment

    Pai, A. S. U., Pillai, J. A., Sørensen, L., Darkner, Sune, Sommer, Stefan Horst & Nielsen, Mads, Jul 2017, In: Alzheimer's & Dementia. 13, 7, supplement, p. P1356 1 p., P4-225.

    Research output: Contribution to journalConference abstract in journalResearch

  53. Published

    Kernel bundle diffeomorphic image registration using stationary velocity fields and Wendland basis functions

    Pai, A. S. U., Sommer, Stefan Horst, Sørensen, L., Darkner, Sune, Sporring, Jon & Nielsen, Mads, 2016, In: IEEE Transactions on Medical Imaging. 35, 6, p. 1369-1380 12 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  54. Published

    White matter hypointensity growth rate correlates with rate of brain atrophy

    Pai, A. S. U., Sørensen, L., Darkner, Sune, Sporring, Jon, Rostrup, E. & Nielsen, Mads, 2014, In: Alzheimer's & Dementia. 10, 4, Supplement, p. P75-P76 2 p., IC-P-131.

    Research output: Contribution to journalConference abstract in journalResearchpeer-review

  55. Published

    Stepwise inverse consistent Euler’s scheme for diffeomorphic image registration

    Pai, A. S. U., Sommer, Stefan Horst, Darkner, Sune, Sørensen, L., Sporring, Jon & Nielsen, Mads, 2014, Biomedical Image Registration: 6th International Workshop, WBIR 2014, London, UK, July 7-8, 2014. Proceedings. Ourselin, S. & Modat, M. (eds.). Springer, p. 223-230 8 p. (Lecture notes in computer science, Vol. 8545).

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

  56. Published

    Cube propagation for focal brain atrophy estimation

    Pai, A. S. U., Sørensen, L., Darkner, Sune, Mysling, P., Jørgensen, D. R., Dam, E. B., Lillholm, Martin, Oh, J., Chen, G., Suhy, J., Sporring, Jon & Nielsen, Mads, 2013, 2013 IEEE 10th International Symposium on Biomedical Imaging. IEEE, p. 402-405 4 p.

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

  57. Published

    Computer based method for determining the size of an objects in an image

    Pai, A. S. U., Sørensen, L., Dam, E. B., Lillholm, Martin & Nielsen, Mads, 4 Dec 2014, Priority date 4 Dec 2014

    Research output: Patent

  58. Published

    Deformation-based atrophy computation by surface propagation and its application to Alzheimer’s disease

    Pai, A. S. U., Sporring, Jon, Darkner, Sune, Dam, Erik Bjørnager, Lillholm, Martin, Jørgensen, D., Oh, J., Chen, G., Suhy, J., Sørensen, L. & Nielsen, Mads, 2016, In: SPIE Journal of Medical Imaging. 3, 1, 11 p., 014005.

    Research output: Contribution to journalJournal articleResearchpeer-review

  59. Published

    A statistical model for simultaneous template estimation, bias correction, and registration of 3D brain images

    Pai, A. S. U., Sommer, Stefan Horst, Raket, L. L., Kühnel, L., Darkner, Sune, Sørensen, L. & Nielsen, Mads, 2017, Medical Computer Vision and Bayesian and Graphical Models for Biomedical Imaging: MICCAI 2016 International Workshops, MCV and BAMBI, Athens, Greece, October 21, 2016, Revised Selected Papers. Müller, H., Kelm, B. M., Arbel, T., Cai, W., Cardoso, M. J., Langs, G., Menze, B., Metaxas, D., Montillo, A., Wells, W. M., Zhang, S., Chung, A. C. S., Jenkinson, M. & Ribbens, A. (eds.). Springer, p. 151-159 9 p. (Lecture notes in computer science, Vol. 10081).

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

  60. Published

    Adaptive time-stepping in dieomorphic image registration with bounded inverse consistency error

    Pai, A. S. U., Klein, S., Sommer, Stefan Horst, Sørensen, L., Darkner, Sune, Sporring, Jon & Nielsen, Mads, 2015, Proceedings of the fifth international workshop on Mathematical Foundations of Computational Anatomy (MFCA 2015) . INRIA, p. 35-47

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

  61. Published

    Adaptive time-stepping in diffeomorphic image registration with bounded inverse consistency error

    Pai, A. S. U., Klein, S., Sommer, Stefan Horst, Sørensen, L. E. B. L., Darkner, Sune, Sporring, Jon & Nielsen, Mads, 2015, The 18th International Conference on Medical Image Computing and Computer Assisted Intervention: proceedings. Technische Universität München , p. 35-47 13 p.

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

  62. Published

    Computer analysis method for analyzing images involves applying algorithm to aligned images to extract quantitative estimate of difference in volume of object shown in second image by calculating change in volume of object

    Pai, A. S. U., Sørensen, L., Dam, E., Lillholm, Martin & Nielsen, Mads, 2014, IPC No. A61B-005/00, Patent No. US2014357978-A1, 4 Dec 2014, Priority date 4 Jun 2013, Priority No. US909666

    Research output: Patent

  63. Published

    Localized cerebral atrophy acceleration during Alzheimer’s disease

    Pai, A. S. U., Sørensen, L., Darkner, Sune, Lillholm, Martin, Dam, E. B., Sporring, Jon & Nielsen, Mads, 2013, In: Alzheimer's & Dementia. 9, 4, Supplement, p. P36–P37 2 p., IC-P-059.

    Research output: Contribution to journalConference abstract in journalResearchpeer-review

  64. Published

    Hippocampus atrophy in early Alzheimer's disease quantified using non-rigid registration with cube propagation

    Pai, A. S. U., Sørensen, L. E. B. L., Mysling, P., Erleben, L. L., Sporring, Jon, Dam, E., Lillholm, M., Jørgensen, D. R., Chen, G., Oh, J., Suhy, J. & Nielsen, Mads, 2013.

    Research output: Contribution to conferenceConference abstract for conferenceResearchpeer-review

  65. Integrated SO-MZI for pattern effect free amplification

    Patent, E. A., Tol, J. V. D., Nielsen, Mads, Binsma, J., Oei, Y., Mørk, J. & Smit, M., 2005, In: I E E E Electron Device Letters. 41, 4, p. 51-52 2 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  66. Computing optic flow by scale-space integration of normal flow

    Pedersen, K. S. & Nielsen, Mads, 2006, In: Scale-Space and Morphology in Computer Vision: Third International Conference, Scale-Space 2001 Vancouver, Canada, July 7--8, 2001 Proceedings. p. 14-25 12 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  67. The hausdorff dimension and scale-space normalization of natural images

    Pedersen, K. S. & Nielsen, Mads, 2000, In: Journal of Visual Communication and Image Representation. 11, 2, p. 266-277 12 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  68. Published

    Computing Optic Flow by Scale-Space Integration of Normal Flow

    Steenstrup Pedersen, Kim & Nielsen, Mads, 2001, Proceedings of DSAGM'01, Den 10. Danske Konference om Mønstergenkendelse og Billedanalyse. p. 124-135 (DIKU teknisk rapport; No. 01-04).

    Research output: Chapter in Book/Report/Conference proceedingConference abstract in proceedingsResearch

  69. On α kernels, Lévy processes, and natural image statistics

    Pedersen, K. S., Duits, R. & Nielsen, Mads, 2005, Scale Space and PDE Methods in Computer Vision. Springer Science+Business Media, p. 468-479 12 p.

    Research output: Chapter in Book/Report/Conference proceedingBook chapterResearchpeer-review

  70. Published

    The Hausdorff Dimension and Scale-Space Normalization of 'Natural Images'

    Steenstrup Pedersen, Kim & Nielsen, Mads, 1999.

    Research output: Contribution to conferenceConference abstract for conferenceResearch

  71. Published

    Leveraging Shape and Spatial Information for Spontaneous Preterm Birth Prediction

    Pegios, P., Sejer, E. P. F., Lin, M., Bashir, Z., Svendsen, M. B. S., Nielsen, Mads, Petersen, E., Christensen, A. N., xgz472, xgz472 & Feragen, A., 2023, Simplifying Medical Ultrasound - 4th International Workshop, ASMUS 2023, Held in Conjunction with MICCAI 2023, Proceedings. Kainz, B., Müller, J. P., Kainz, B., Noble, A., Schnabel, J., Khanal, B. & Day, T. (eds.). Springer, p. 57-67 11 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), Vol. 14337 LNCS).

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

  72. Published

    Mathematical methods for medical imaging

    Pennec, X., Joshi, S. & Nielsen, Mads, 2013, In: International Journal of Computer Vision. 105, 2, p. 109-110 2 p.

    Research output: Contribution to journalEditorialResearch

  73. Published

    Proceedings of the Fourth International Workshop on Mathematical Foundations of Computational Anatomy - Geometrical and Statistical Methods for Biological Shape Variability Modeling (MFCA 2013), Nagoya, Japan

    Pennec, X. (ed.), Joshi, S. (ed.), Nielsen, Mads (ed.), Fletcher, T. P. (ed.), Durrleman, S. (ed.) & Sommer, Stefan Horst (ed.), 2013, INRIA. 134 p.

    Research output: Book/ReportBookResearchpeer-review

  74. Published
  75. Published

    Proceedings of the fifth international workshop on Mathematical Foundations of Computational Anatomy (MFCA 2015)

    Pennec, X. (ed.), Joshi, S. (ed.), Nielsen, Mads (ed.), Fletcher, T. P. (ed.), Durrleman, S. (ed.) & Sommer, Stefan Horst (ed.), 2015, INRIA. 173 p.

    Research output: Book/ReportAnthologyResearch

  76. Published

    Longitudinal analysis of airways using registration

    Petersen, Jens, Gorbunova, V., Nielsen, Mads, Dirksen, A., Lo, P. C. P. & de Bruijne, Marleen, 2011, The Fourth International Workshop on Pulmonary Image Analysis. Beichel, R., de Bruijne, M., van Ginneken, B., Kabus, S., Kiraly, A., Kuhnigk, J-M., McClelland, J., Mori, K., van Rikxoort, E. & Rit, S. (eds.). CreateSpace Independent Publishing Platform , p. 11-22 12 p.

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

  77. Published

    Optimal graph based segmentation using flow lines with application to airway wall segmentation

    Petersen, Jens, Nielsen, Mads, Lo, P. C. P., Saghir, Z., Dirksen, A. & de Bruijne, Marleen, 2011, Information Processing in Medical Imaging: 22nd International Conference, IPMI 2011, Kloster Irsee, Germany, July 3-8, 2011. Proceedings. Székely, G. & Hahn, H. K. (eds.). Springer, p. 49-60 12 p. (Lecture notes in computer science, Vol. 6801).

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

  78. Published

    Optimal surface segmentation using flow lines to quantify airway abnormalities in chronic obstructive pulmonary disease

    Petersen, Jens, Nielsen, Mads, Lo, P. C. P., Nordenmark, L. H., Pedersen, J. J. H., Wille, M. M. W., Dirksen, A. & de Bruijne, Marleen, 2014, In: Medical Image Analysis. 18, 3, p. 531-541 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  79. Published

    Effect of inspiration on airway dimensions measured in maximal inspiration CT images of subjects without airflow limitation

    Petersen, Jens, Wille, M. M. W., Raket, L. L., Feragen, A., Pedersen, J. H., Nielsen, Mads, Dirksen, A. & de Bruijne, Marleen, 2014, In: European Radiology. 24, 9, p. 2319-2325 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  80. Published

    Quantitative analysis of airway abnormalities in CT

    Petersen, Jens, Lo, P. C. P., Nielsen, Mads, Edula, G., Ashraf, H., Dirksen, A. & de Bruijne, Marleen, 2010, Medical Imaging 2010: computer-aided Diagnosis. Karssemeijer, N. & Summers, R. M. (eds.). SPIE - International Society for Optical Engineering, 12 p. 76241S. (Progress in Biomedical Optics and Imaging; No. 34, Vol. 11).

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

  81. Published

    Increasing Accuracy of Optimal Surfaces Using Min-marginal Energies

    Petersen, Jens, Arias-Lorza, A. M., Selvan, Raghav, Bos, D., van der Lugt, A., Pedersen, J. H., Nielsen, Mads & de Bruijne, Marleen, 1 Jan 2019, In: IEEE Transactions on Medical Imaging. 38, 7, p. 1559-1568 8599009.

    Research output: Contribution to journalJournal articleResearchpeer-review

  82. Fully automatic estimation of film-based breast percentage density separate out postmenopausal hormone replacement treatment effects as well as expert's estimation

    Petersen, K., Chernoff, K., Karemore, G. R., Christiansen, C. & Nielsen, Mads, 2012, In: European Journal of Cancer. 48, Supplement 1, p. S145 1 p., 351.

    Research output: Contribution to journalConference abstract in journalResearchpeer-review

  83. Published

    A static SMC sampler on shapes for the automated segmentation of aortic calcifications

    Petersen, P. K., Nielsen, Mads & Brandt, S. S., 2010, Computer Vision – ECCV 2010: 11th European Conference on Computer Vision, Heraklion, Crete, Greece, September 5-11, 2010, Proceedings, Part IV. Daniilidis, K., Maragos, P. & Paragios, N. (eds.). Springer, p. 666-679 14 p. (Lecture notes in computer science, Vol. 6314).

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

  84. Published

    Breast density scoring with multiscale denoising autoencoders

    Petersen, P. K., Chernoff, K., Nielsen, Mads & Ng, A. Y., 2012. 8 p.

    Research output: Contribution to conferencePaperResearchpeer-review

  85. Published

    Breast tissue segmentation and mammographic risk scoring using deep learning

    Petersen, P. K., Nielsen, Mads, Diao, P., Karssemeijer, N. & Lillholm, Martin, 2014, Breast imaging: 12th International Workshop, IWDM 2014, Gifu City, Japan, June 29 – July 2, 2014. Proceedings. Fujita, H., Hara, T. & Muramatsu, C. (eds.). Springer Science+Business Media, p. 88-94 7 p. (Lecture notes in computer science, Vol. 8539).

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

  86. Published

    A Bayesian framework for automated cardiovascular risk scoring on standard lumbar radiographs

    Petersen, P. K., Ganz, Melanie, Mysling, P., Nielsen, Mads, Erleben, L. L., Crimi, A. & Brandt, S. S., 2012, In: I E E E Transactions on Medical Imaging. 31, 3, p. 663-676 14 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  87. Published

    Conditional point distribution models

    Petersen, P. K., Nielsen, Mads & Brandt, S. S., 2011, Medical Computer Vision. Recognition Techniques and Applications in Medical Imaging: International MICCAI Workshop, MCV 2010, Beijing, China, September 20, 2010, Revised Selected Papers. Menze, B., Langs, G., Tu, Z. & Criminisi, A. (eds.). Springer, p. 1-10 10 p. (Lecture notes in computer science, Vol. 6533).

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

  88. Published

    Parallel assessment of the impact of different hormone replacement therapies on breast density by radiologist-and computer-based analyses of mammograms

    Pettersen, P. C., Raundahl, J., Loog, M., Nielsen, Mads, Tankó, L. B. & Christiansen, C., 2008, In: Climacteric. 11, 2, p. 135-143 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  89. Published

    Parallel Assessment of the Impact of Different Hormone Replacement Therapies on Breast Density by Radiologist- and Computer-Based Analyses of Mammograms

    Pettersen, P., Raundahl, J., Loog, M., Nielsen, Mads, Tankó, L. B. & Christiansen, C., 2008, In: Climacteric. 11, 2, p. 135-143 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  90. Published

    Persistent hippocampal predominant atrophy in pre dementia as a marker for slower functional decline

    Pillai, J., Pai, A. S. U., Sørensen, L. & Nielsen, Mads, 2014, In: Alzheimer's & Dementia. 10, 4, Supplement, p. P538-P539 2 p., P2-186.

    Research output: Contribution to journalConference abstract in journalResearchpeer-review

  91. Published

    Persistent hippocampal predominant atrophy in pre dementia as a marker for slower functional decline

    Pillai, J., Pai, A. S. U., Sørensen, L. & Nielsen, Mads, 2014, In: Alzheimer's & Dementia. 10, 4, Supplement, p. P34-P35 2 p., IC-P-061.

    Research output: Contribution to journalConference abstract in journalResearchpeer-review

  92. Published

    Inflammatory pathway analytes predicting rapid cognitive decline in MCI stage of Alzheimer’s disease

    Pillai, J. A., Bena, J., Bebek, G., Bekris, L. M., Bonner-Jackson, A., Kou, L., Pai, A., Sørensen, L., Nielsen, Mads, Rao, S. M., Chance, M., Lamb, B. T. & Leverenz, J. B., 2020, In: Annals of Clinical and Translational Neurology. 7, 7, p. 1225-1239 15 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  93. Published

    Deep feature learning for knee cartilage segmentation using a triplanar convolutional neural network

    Prasoon, A., Petersen, P. K., Igel, Christian, Lauze, Francois Bernard, Dam, Erik Bjørnager & Nielsen, Mads, 2013, Medical Image Computing and Computer-Assisted Intervention – MICCAI 2013: 16th International Conference, Nagoya, Japan, September 22-26, 2013, Proceedings, Part II. Mori, K., Sakuma, I., Sato, Y., Barillot, C. & Navab, N. (eds.). Springer, p. 246-253 8 p. (Lecture notes in computer science, Vol. 8150).

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

  94. Published

    Cascaded classifier for large-scale data applied to automatic segmentation of articular cartilage

    Prasoon, A., Igel, Christian, Loog, M., Lauze, Francois Bernard, Dam, E. & Nielsen, Mads, 2012, Medical Imaging 2012: Image Processing. Haynor, D. R. & Ourselin, S. (eds.). SPIE - International Society for Optical Engineering, Vol. 8314. 9 p. 83144V. (SPIE Proceedings, Vol. 8314).

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

  95. Published

    Femoral cartilage segmentation in knee MRI scans using two stage voxel classification

    Prasoon, A., Igel, Christian, Loog, M., Lauze, Francois Bernard, Dam, E. & Nielsen, Mads, 2013, 35th Annual International Conference of the IEEE; Engineering in Medicine and Biology Society (EMBC), 2013. IEEE, p. 5469-5472 4 p.

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

  96. Published

    Osteoarthritic cartilage is more homogeneous than healthy cartilage: identification of a superior region of interest colocalized with a major risk factor for osteoarthritis

    Qazi, A. A., Dam, Erik Bjørnager, Nielsen, Mads, Karsdal, M. A., Pettersen, P. C. & Christiansen, C., Oct 2007, In: Academic Radiology. 14, 10, p. 1209-20 12 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  97. Published

    Automatic Detection of Diseased Regions in Knee Cartilage

    Qazi, A. A., Dam, E., Olsen, O. F., Nielsen, Mads & Christiansen, C., 2007, Medical imaging 2007: Image processing, 18-20 February, 2007, San Diego, California, USA. Pluim, J. P. W. & Reinhardt, J. M. (eds.). SPIE, 8 p. (Proceedings of SPIE; No. 6512).

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

  98. Submitted

    Automatic Quantification of Pathology Indicating Measure Related to Cartilage Structure From Cartilage Scan Data

    Qazi, A. A., Dam, E., Olsen, O. F., Nielsen, Mads, Pettersen, P. & Christiansen, C., 2007, (Submitted)

    Research output: Patent

  99. Published

    Homogeneity discrimination leads to identification of a superior ROI in knee cartilage

    Qazi, A. A., Dam, E., Karsdal, M., Nielsen, Mads & Christiansen, C., 2008, EULAR, European League against rheumatism: Abstract archive. EULAR, 1 p.

    Research output: Chapter in Book/Report/Conference proceedingConference abstract in proceedingsResearch

  100. Published

    A Variational Method for Automatic Localization of the most Pathological ROI

    Qazi, A. A., Dam, E., Loog, M., Nielsen, Mads, Lauze, Francois Bernard & Christiansen, C., 2008, Medical Imaging 2008: Image processing, Conference Proceedings. Reinhardt, J. M. & Pluim, J. P. W. (eds.). SPIE - International Society for Optical Engineering, p. Article 69140T 9 p. (Proceedings of SPIE; No. 6914).

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

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