Automated Estimation of the Spinal Curvature via Spine Centerline Extraction with Ensembles of Cascaded Neural Networks

Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

Standard

Automated Estimation of the Spinal Curvature via Spine Centerline Extraction with Ensembles of Cascaded Neural Networks. / Dubost, Florian; Collery, Benjamin; Renaudier, Antonin; Roc, Axel; Posocco, Nicolas; Niessen, Wiro; de Bruijne, Marleen.

Computational Methods and Clinical Applications for Spine Imaging: 6th International Workshop and Challenge, CSI 2019, Proceedings. ed. / Yunliang Cai; Liansheng Wang; Michel Audette; Guoyan Zheng; Shuo Li. Springer VS, 2020. p. 88-94 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), Vol. 11963 LNCS).

Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

Harvard

Dubost, F, Collery, B, Renaudier, A, Roc, A, Posocco, N, Niessen, W & de Bruijne, M 2020, Automated Estimation of the Spinal Curvature via Spine Centerline Extraction with Ensembles of Cascaded Neural Networks. in Y Cai, L Wang, M Audette, G Zheng & S Li (eds), Computational Methods and Clinical Applications for Spine Imaging: 6th International Workshop and Challenge, CSI 2019, Proceedings. Springer VS, Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), vol. 11963 LNCS, pp. 88-94, 6th International Workshop and Challenge on Computational Methods and Clinical Applications for Spine Imaging, CSI 2019, held in conjunction with the 22nd International Conference on Medical Image Computing and Computer Assisted Intervention, MICCAI 2019, Shenzhen, China, 17/10/2019. https://doi.org/10.1007/978-3-030-39752-4_10

APA

Dubost, F., Collery, B., Renaudier, A., Roc, A., Posocco, N., Niessen, W., & de Bruijne, M. (2020). Automated Estimation of the Spinal Curvature via Spine Centerline Extraction with Ensembles of Cascaded Neural Networks. In Y. Cai, L. Wang, M. Audette, G. Zheng, & S. Li (Eds.), Computational Methods and Clinical Applications for Spine Imaging: 6th International Workshop and Challenge, CSI 2019, Proceedings (pp. 88-94). Springer VS. Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) Vol. 11963 LNCS https://doi.org/10.1007/978-3-030-39752-4_10

Vancouver

Dubost F, Collery B, Renaudier A, Roc A, Posocco N, Niessen W et al. Automated Estimation of the Spinal Curvature via Spine Centerline Extraction with Ensembles of Cascaded Neural Networks. In Cai Y, Wang L, Audette M, Zheng G, Li S, editors, Computational Methods and Clinical Applications for Spine Imaging: 6th International Workshop and Challenge, CSI 2019, Proceedings. Springer VS. 2020. p. 88-94. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), Vol. 11963 LNCS). https://doi.org/10.1007/978-3-030-39752-4_10

Author

Dubost, Florian ; Collery, Benjamin ; Renaudier, Antonin ; Roc, Axel ; Posocco, Nicolas ; Niessen, Wiro ; de Bruijne, Marleen. / Automated Estimation of the Spinal Curvature via Spine Centerline Extraction with Ensembles of Cascaded Neural Networks. Computational Methods and Clinical Applications for Spine Imaging: 6th International Workshop and Challenge, CSI 2019, Proceedings. editor / Yunliang Cai ; Liansheng Wang ; Michel Audette ; Guoyan Zheng ; Shuo Li. Springer VS, 2020. pp. 88-94 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), Vol. 11963 LNCS).

Bibtex

@inproceedings{cdf9ecc060544fafbc3265fc6239274b,
title = "Automated Estimation of the Spinal Curvature via Spine Centerline Extraction with Ensembles of Cascaded Neural Networks",
abstract = "Scoliosis is a condition defined by an abnormal spinal curvature. For diagnosis and treatment planning of scoliosis, spinal curvature can be estimated using Cobb angles. We propose an automated method for the estimation of Cobb angles from X-ray scans. First, the centerline of the spine was segmented using a cascade of two convolutional neural networks. After smoothing the centerline, Cobb angles were automatically estimated using the derivative of the centerline. We evaluated the results using the mean absolute error and the average symmetric mean absolute percentage error between the manual assessment by experts and the automated predictions. For optimization, we used 609 X-ray scans from the London Health Sciences Center, and for evaluation, we participated in the international challenge “Accurate Automated Spinal Curvature Estimation, MICCAI 2019” (100 scans). On the challenge{\textquoteright}s test set, we obtained an average symmetric mean absolute percentage error of 22.96.",
author = "Florian Dubost and Benjamin Collery and Antonin Renaudier and Axel Roc and Nicolas Posocco and Wiro Niessen and {de Bruijne}, Marleen",
year = "2020",
doi = "10.1007/978-3-030-39752-4_10",
language = "English",
isbn = "9783030397517",
series = "Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)",
publisher = "Springer VS",
pages = "88--94",
editor = "Yunliang Cai and Liansheng Wang and Michel Audette and Guoyan Zheng and Shuo Li",
booktitle = "Computational Methods and Clinical Applications for Spine Imaging",
note = "6th International Workshop and Challenge on Computational Methods and Clinical Applications for Spine Imaging, CSI 2019, held in conjunction with the 22nd International Conference on Medical Image Computing and Computer Assisted Intervention, MICCAI 2019 ; Conference date: 17-10-2019 Through 17-10-2019",

}

RIS

TY - GEN

T1 - Automated Estimation of the Spinal Curvature via Spine Centerline Extraction with Ensembles of Cascaded Neural Networks

AU - Dubost, Florian

AU - Collery, Benjamin

AU - Renaudier, Antonin

AU - Roc, Axel

AU - Posocco, Nicolas

AU - Niessen, Wiro

AU - de Bruijne, Marleen

PY - 2020

Y1 - 2020

N2 - Scoliosis is a condition defined by an abnormal spinal curvature. For diagnosis and treatment planning of scoliosis, spinal curvature can be estimated using Cobb angles. We propose an automated method for the estimation of Cobb angles from X-ray scans. First, the centerline of the spine was segmented using a cascade of two convolutional neural networks. After smoothing the centerline, Cobb angles were automatically estimated using the derivative of the centerline. We evaluated the results using the mean absolute error and the average symmetric mean absolute percentage error between the manual assessment by experts and the automated predictions. For optimization, we used 609 X-ray scans from the London Health Sciences Center, and for evaluation, we participated in the international challenge “Accurate Automated Spinal Curvature Estimation, MICCAI 2019” (100 scans). On the challenge’s test set, we obtained an average symmetric mean absolute percentage error of 22.96.

AB - Scoliosis is a condition defined by an abnormal spinal curvature. For diagnosis and treatment planning of scoliosis, spinal curvature can be estimated using Cobb angles. We propose an automated method for the estimation of Cobb angles from X-ray scans. First, the centerline of the spine was segmented using a cascade of two convolutional neural networks. After smoothing the centerline, Cobb angles were automatically estimated using the derivative of the centerline. We evaluated the results using the mean absolute error and the average symmetric mean absolute percentage error between the manual assessment by experts and the automated predictions. For optimization, we used 609 X-ray scans from the London Health Sciences Center, and for evaluation, we participated in the international challenge “Accurate Automated Spinal Curvature Estimation, MICCAI 2019” (100 scans). On the challenge’s test set, we obtained an average symmetric mean absolute percentage error of 22.96.

UR - http://www.scopus.com/inward/record.url?scp=85080888971&partnerID=8YFLogxK

U2 - 10.1007/978-3-030-39752-4_10

DO - 10.1007/978-3-030-39752-4_10

M3 - Article in proceedings

AN - SCOPUS:85080888971

SN - 9783030397517

T3 - Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

SP - 88

EP - 94

BT - Computational Methods and Clinical Applications for Spine Imaging

A2 - Cai, Yunliang

A2 - Wang, Liansheng

A2 - Audette, Michel

A2 - Zheng, Guoyan

A2 - Li, Shuo

PB - Springer VS

T2 - 6th International Workshop and Challenge on Computational Methods and Clinical Applications for Spine Imaging, CSI 2019, held in conjunction with the 22nd International Conference on Medical Image Computing and Computer Assisted Intervention, MICCAI 2019

Y2 - 17 October 2019 through 17 October 2019

ER -

ID: 239586322