Evaluating classifiers for atherosclerotic plaque component segmentation in MRI

Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

Standard

Evaluating classifiers for atherosclerotic plaque component segmentation in MRI. / van Engelen, Arna; de Bruijne, Marleen; Schneider, Torben; van Dijk, Anouk C.; Kooi, M. Eline; Hendrikse, Jeroen; Nederveen, Aart; Niessen, Wiro; Botnar, Rene M.

Medical Image Understanding and Analysis: 21st Annual Conference, MIUA 2017, Edinburgh, UK, July 11–13, 2017, Proceedings. ed. / María Valdés Hernández; Víctor González-Castro. Vol. 723 Springer, 2017. p. 156-168 (Communications in Computer and Information Science, Vol. 723).

Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

Harvard

van Engelen, A, de Bruijne, M, Schneider, T, van Dijk, AC, Kooi, ME, Hendrikse, J, Nederveen, A, Niessen, W & Botnar, RM 2017, Evaluating classifiers for atherosclerotic plaque component segmentation in MRI. in MV Hernández & V González-Castro (eds), Medical Image Understanding and Analysis: 21st Annual Conference, MIUA 2017, Edinburgh, UK, July 11–13, 2017, Proceedings. vol. 723, Springer, Communications in Computer and Information Science, vol. 723, pp. 156-168, 21st Annual Conference on Medical Image Understanding and Analysis, Edinburgh, United Kingdom, 11/07/2017. https://doi.org/10.1007/978-3-319-60964-5_14

APA

van Engelen, A., de Bruijne, M., Schneider, T., van Dijk, A. C., Kooi, M. E., Hendrikse, J., Nederveen, A., Niessen, W., & Botnar, R. M. (2017). Evaluating classifiers for atherosclerotic plaque component segmentation in MRI. In M. V. Hernández, & V. González-Castro (Eds.), Medical Image Understanding and Analysis: 21st Annual Conference, MIUA 2017, Edinburgh, UK, July 11–13, 2017, Proceedings (Vol. 723, pp. 156-168). Springer. Communications in Computer and Information Science Vol. 723 https://doi.org/10.1007/978-3-319-60964-5_14

Vancouver

van Engelen A, de Bruijne M, Schneider T, van Dijk AC, Kooi ME, Hendrikse J et al. Evaluating classifiers for atherosclerotic plaque component segmentation in MRI. In Hernández MV, González-Castro V, editors, Medical Image Understanding and Analysis: 21st Annual Conference, MIUA 2017, Edinburgh, UK, July 11–13, 2017, Proceedings. Vol. 723. Springer. 2017. p. 156-168. (Communications in Computer and Information Science, Vol. 723). https://doi.org/10.1007/978-3-319-60964-5_14

Author

van Engelen, Arna ; de Bruijne, Marleen ; Schneider, Torben ; van Dijk, Anouk C. ; Kooi, M. Eline ; Hendrikse, Jeroen ; Nederveen, Aart ; Niessen, Wiro ; Botnar, Rene M. / Evaluating classifiers for atherosclerotic plaque component segmentation in MRI. Medical Image Understanding and Analysis: 21st Annual Conference, MIUA 2017, Edinburgh, UK, July 11–13, 2017, Proceedings. editor / María Valdés Hernández ; Víctor González-Castro. Vol. 723 Springer, 2017. pp. 156-168 (Communications in Computer and Information Science, Vol. 723).

Bibtex

@inproceedings{b10192ea48764167a241f0dbeceb6d7c,
title = "Evaluating classifiers for atherosclerotic plaque component segmentation in MRI",
abstract = "Segmentation of tissue components of atherosclerotic plaques in MRI is promising for improving future treatment strategies of cardiovascular diseases. Several methods have been proposed before with varying results. This study aimed to perform a structured comparison of various classifiers, training set sizes, and MR image sequences to determine the most promising strategy for methodology development. Five different classifiers (linear discriminant classifier (LDC), quadratic discriminant classifier (QDC), random forest (RF), and support vector classifiers with both a linear (SVMlin) and radial basis function kernel (SVMrbf)) were evaluated. We used carotid MRI data from 124 symptomatic patients, scanned in 4 centres with 2 different MRI protocols (45 and 79 patients). Firstly, learning curves of accuracy as a function of increasing training data size showed stabilisation of performance after using ∼10–15 patients for training. Best results were found for LDC, QDC and RF. Intraplaque haemorrhage was most accurately classified in both protocols, and lowest accuracy was found for the lipid-rich necrotic core. Secondly, for LDC and RF it was shown that leaving out different MRI sequences usually negatively affects results for one or more classes. However, leaving out T2-weighted scans did not have a big impact. In conclusion, several classifiers obtain generally good results for classification of plaque components in MRI. Identification of intraplaque haemorrhage is the most promising, and lipid-rich necrotic core remains the most difficult.",
author = "{van Engelen}, Arna and {de Bruijne}, Marleen and Torben Schneider and {van Dijk}, {Anouk C.} and Kooi, {M. Eline} and Jeroen Hendrikse and Aart Nederveen and Wiro Niessen and Botnar, {Rene M.}",
year = "2017",
doi = "10.1007/978-3-319-60964-5_14",
language = "English",
isbn = "978-3-319-60963-8",
volume = "723",
series = "Communications in Computer and Information Science",
publisher = "Springer",
pages = "156--168",
editor = "Hern{\'a}ndez, {Mar{\'i}a Vald{\'e}s} and V{\'i}ctor Gonz{\'a}lez-Castro",
booktitle = "Medical Image Understanding and Analysis",
address = "Switzerland",
note = "21st Annual Conference on Medical Image Understanding and Analysis, MIUA 2017 ; Conference date: 11-07-2017 Through 13-07-2017",

}

RIS

TY - GEN

T1 - Evaluating classifiers for atherosclerotic plaque component segmentation in MRI

AU - van Engelen, Arna

AU - de Bruijne, Marleen

AU - Schneider, Torben

AU - van Dijk, Anouk C.

AU - Kooi, M. Eline

AU - Hendrikse, Jeroen

AU - Nederveen, Aart

AU - Niessen, Wiro

AU - Botnar, Rene M.

N1 - Conference code: 21

PY - 2017

Y1 - 2017

N2 - Segmentation of tissue components of atherosclerotic plaques in MRI is promising for improving future treatment strategies of cardiovascular diseases. Several methods have been proposed before with varying results. This study aimed to perform a structured comparison of various classifiers, training set sizes, and MR image sequences to determine the most promising strategy for methodology development. Five different classifiers (linear discriminant classifier (LDC), quadratic discriminant classifier (QDC), random forest (RF), and support vector classifiers with both a linear (SVMlin) and radial basis function kernel (SVMrbf)) were evaluated. We used carotid MRI data from 124 symptomatic patients, scanned in 4 centres with 2 different MRI protocols (45 and 79 patients). Firstly, learning curves of accuracy as a function of increasing training data size showed stabilisation of performance after using ∼10–15 patients for training. Best results were found for LDC, QDC and RF. Intraplaque haemorrhage was most accurately classified in both protocols, and lowest accuracy was found for the lipid-rich necrotic core. Secondly, for LDC and RF it was shown that leaving out different MRI sequences usually negatively affects results for one or more classes. However, leaving out T2-weighted scans did not have a big impact. In conclusion, several classifiers obtain generally good results for classification of plaque components in MRI. Identification of intraplaque haemorrhage is the most promising, and lipid-rich necrotic core remains the most difficult.

AB - Segmentation of tissue components of atherosclerotic plaques in MRI is promising for improving future treatment strategies of cardiovascular diseases. Several methods have been proposed before with varying results. This study aimed to perform a structured comparison of various classifiers, training set sizes, and MR image sequences to determine the most promising strategy for methodology development. Five different classifiers (linear discriminant classifier (LDC), quadratic discriminant classifier (QDC), random forest (RF), and support vector classifiers with both a linear (SVMlin) and radial basis function kernel (SVMrbf)) were evaluated. We used carotid MRI data from 124 symptomatic patients, scanned in 4 centres with 2 different MRI protocols (45 and 79 patients). Firstly, learning curves of accuracy as a function of increasing training data size showed stabilisation of performance after using ∼10–15 patients for training. Best results were found for LDC, QDC and RF. Intraplaque haemorrhage was most accurately classified in both protocols, and lowest accuracy was found for the lipid-rich necrotic core. Secondly, for LDC and RF it was shown that leaving out different MRI sequences usually negatively affects results for one or more classes. However, leaving out T2-weighted scans did not have a big impact. In conclusion, several classifiers obtain generally good results for classification of plaque components in MRI. Identification of intraplaque haemorrhage is the most promising, and lipid-rich necrotic core remains the most difficult.

UR - http://www.scopus.com/inward/record.url?scp=85022181570&partnerID=8YFLogxK

U2 - 10.1007/978-3-319-60964-5_14

DO - 10.1007/978-3-319-60964-5_14

M3 - Article in proceedings

AN - SCOPUS:85022181570

SN - 978-3-319-60963-8

VL - 723

T3 - Communications in Computer and Information Science

SP - 156

EP - 168

BT - Medical Image Understanding and Analysis

A2 - Hernández, María Valdés

A2 - González-Castro, Víctor

PB - Springer

T2 - 21st Annual Conference on Medical Image Understanding and Analysis

Y2 - 11 July 2017 through 13 July 2017

ER -

ID: 185748301