Sune Darkner
Associate Professor
Image Analysis, Computational Modelling and Geometry
Universitetsparken 1
2100 København Ø
- Published
The cartilage bone junction and its implications for deep canal hearing instrument fittings
Nielsen, C. & Darkner, Sune, 2011, In: Hearing Journal. 64, 3, p. 35-42 4 p.Research output: Contribution to journal › Journal article › Research › peer-review
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TopAwaRe: Topology-Aware Registration
Nielsen, R. K., Darkner, Sune & Feragen, A., 2019, Medical Image Computing and Computer Assisted Intervention – MICCAI 2019 - 22nd International Conference, Proceedings. Shen, D., Yap, P-T., Liu, T., Peters, T. M., Khan, A., Staib, L. H., Essert, C. & Zhou, S. (eds.). Springer VS, p. 364-372 9 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), Vol. 11765 LNCS).Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
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Localized cerebral atrophy acceleration during Alzheimer’s disease
Pai, A. S. U., Sørensen, L., Darkner, Sune, Lillholm, Martin, Dam, E. B., Sporring, Jon & Nielsen, Mads, 2013, In: Alzheimer's & Dementia. 9, 4, Supplement, p. P36–P37 2 p., IC-P-059.Research output: Contribution to journal › Conference abstract in journal › Research › peer-review
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White matter hypointensity growth rate correlates with rate of brain atrophy
Pai, A. S. U., Sørensen, L., Darkner, Sune, Sporring, Jon, Rostrup, E. & Nielsen, Mads, 2014, In: Alzheimer's & Dementia. 10, 4, Supplement, p. P414 1 p., P1-285.Research output: Contribution to journal › Conference abstract in journal › Research › peer-review
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Image registration using stationary velocity fields parameterized by norm-minimizing Wendland kernel
Pai, A. S. U., Sommer, Stefan Horst, Sørensen, L., Darkner, Sune, Sporring, Jon & Nielsen, Mads, 2015, Medical Imaging 2015: Image Processing. SPIE - International Society for Optical Engineering, 7 p. (Proceedings of S P I E - International Society for Optical Engineering, Vol. 9413).Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
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Diffeomorphic image registration with automatic time-step adjustment
Pai, A. S. U., Klein, S., Sommer, Stefan Horst, Darkner, Sune, Sporring, Jon & Nielsen, Mads, 2015, 2015 IEEE 12th International Symposium on Biomedical Imaging (ISBI). IEEE, p. 1085-1088 4 p.Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
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Comparison of several computational pipelines for atrophy computation in longitudinal Alzheimers studies
Pai, A. S. U., Sommer, Stefan Horst, Darkner, Sune, Sørensen, L. E. B. L., Sporring, Jon & Nielsen, Mads, 2015. 1 p.Research output: Contribution to conference › Conference abstract for conference › Research › peer-review
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Evaluation of bias in brain atrophy estimation
Pai, A. S. U., Darkner, Sune, Sørensen, L., Erleben, L. L., Mysling, P., Sporring, Jon, Dam, E. & Nielsen, Mads, 2012, NIBAD '12: MICCAI 2012 Workshop on Novel Imaging Biomarkers for Alzheimer’s Disease and Related Disorders. Wang, L., Yushkevich, P. & Ourselin, S. (eds.). MICCAI , p. 198-206 9 p.Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
- Published
Localized cerebral atrophy acceleration during Alzheimer’s disease
Pai, A. S. U., Sørensen, L., Darkner, Sune, Lillholm, Martin, Dam, E. B., Sporring, Jon & Nielsen, Mads, 2013, In: Alzheimer's & Dementia. 9, 4, Supplement, p. P151 1 p., O1-10-06.Research output: Contribution to journal › Conference abstract in journal › Research › peer-review
- Published
Hippocampal texture predicts rate of cognitive decline in mild cognitive impairment
Pai, A. S. U., Pillai, J. A., Sørensen, L., Darkner, Sune, Sommer, Stefan Horst & Nielsen, Mads, Jul 2017, In: Alzheimer's & Dementia. 13, 7, supplement, p. P1356 1 p., P4-225.Research output: Contribution to journal › Conference abstract in journal › Research
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Kernel bundle diffeomorphic image registration using stationary velocity fields and Wendland basis functions
Pai, A. S. U., Sommer, Stefan Horst, Sørensen, L., Darkner, Sune, Sporring, Jon & Nielsen, Mads, 2016, In: IEEE Transactions on Medical Imaging. 35, 6, p. 1369-1380 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
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White matter hypointensity growth rate correlates with rate of brain atrophy
Pai, A. S. U., Sørensen, L., Darkner, Sune, Sporring, Jon, Rostrup, E. & Nielsen, Mads, 2014, In: Alzheimer's & Dementia. 10, 4, Supplement, p. P75-P76 2 p., IC-P-131.Research output: Contribution to journal › Conference abstract in journal › Research › peer-review
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Stepwise inverse consistent Euler’s scheme for diffeomorphic image registration
Pai, A. S. U., Sommer, Stefan Horst, Darkner, Sune, Sørensen, L., Sporring, Jon & Nielsen, Mads, 2014, Biomedical Image Registration: 6th International Workshop, WBIR 2014, London, UK, July 7-8, 2014. Proceedings. Ourselin, S. & Modat, M. (eds.). Springer, p. 223-230 8 p. (Lecture notes in computer science, Vol. 8545).Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
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Cube propagation for focal brain atrophy estimation
Pai, A. S. U., Sørensen, L., Darkner, Sune, Mysling, P., Jørgensen, D. R., Dam, E. B., Lillholm, Martin, Oh, J., Chen, G., Suhy, J., Sporring, Jon & Nielsen, Mads, 2013, 2013 IEEE 10th International Symposium on Biomedical Imaging. IEEE, p. 402-405 4 p.Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
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Deformation-based atrophy computation by surface propagation and its application to Alzheimer’s disease
Pai, A. S. U., Sporring, Jon, Darkner, Sune, Dam, Erik Bjørnager, Lillholm, Martin, Jørgensen, D., Oh, J., Chen, G., Suhy, J., Sørensen, L. & Nielsen, Mads, 2016, In: SPIE Journal of Medical Imaging. 3, 1, 11 p., 014005.Research output: Contribution to journal › Journal article › Research › peer-review
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A statistical model for simultaneous template estimation, bias correction, and registration of 3D brain images
Pai, A. S. U., Sommer, Stefan Horst, Raket, L. L., Kühnel, L., Darkner, Sune, Sørensen, L. & Nielsen, Mads, 2017, Medical Computer Vision and Bayesian and Graphical Models for Biomedical Imaging: MICCAI 2016 International Workshops, MCV and BAMBI, Athens, Greece, October 21, 2016, Revised Selected Papers. Müller, H., Kelm, B. M., Arbel, T., Cai, W., Cardoso, M. J., Langs, G., Menze, B., Metaxas, D., Montillo, A., Wells, W. M., Zhang, S., Chung, A. C. S., Jenkinson, M. & Ribbens, A. (eds.). Springer, p. 151-159 9 p. (Lecture notes in computer science, Vol. 10081).Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
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Adaptive time-stepping in dieomorphic image registration with bounded inverse consistency error
Pai, A. S. U., Klein, S., Sommer, Stefan Horst, Sørensen, L., Darkner, Sune, Sporring, Jon & Nielsen, Mads, 2015, Proceedings of the fifth international workshop on Mathematical Foundations of Computational Anatomy (MFCA 2015) . INRIA, p. 35-47Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
- Published
Adaptive time-stepping in diffeomorphic image registration with bounded inverse consistency error
Pai, A. S. U., Klein, S., Sommer, Stefan Horst, Sørensen, L. E. B. L., Darkner, Sune, Sporring, Jon & Nielsen, Mads, 2015, The 18th International Conference on Medical Image Computing and Computer Assisted Intervention: proceedings. Technische Universität München , p. 35-47 13 p.Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
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U-Sleep: resilient high-frequency sleep staging
Perslev, Mathias, Darkner, Sune, Kempfner, L., Nikolic, M., Jennum, Poul & Igel, Christian, 15 Apr 2021, In: npj Digital Medicine. 4, 1, 12 p., 72.Research output: Contribution to journal › Journal article › Research › peer-review
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U-Time: A Fully Convolutional Network for Time Series Segmentation Applied to Sleep Staging
Perslev, Mathias, Hejselbak Jensen, M., Darkner, Sune, Jørgen Jennum, P. & Igel, Christian, 1 Oct 2019, Advances in Neural Information Processing Systems 32 (NIPS 2019). NIPS Proceedings, Vol. 32. p. 4415-4426Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
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Automatic FDG-PET-based tumor and metastatic lymph node segmentation in cervical cancer
Rodríguez Arbonès, D., Jensen, H. G., Loft, A., af Rosenschöld, P. M., Hansen, A. E., Igel, Christian & Darkner, Sune, 2014, Medical Imaging 2014: Image Processing. Ourselin, S. & Styner, M. A. (eds.). SPIE - International Society for Optical Engineering, 8 p. 903441. (Progress in Biomedical Optics and Imaging; No. 35, Vol. 15).Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
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Global Position Prediction for Interactive Motion Capture
Schreiner, Paul, Perepichka, M., Lewis, H., Darkner, Sune, Kry, P. G., Erleben, Kenny & Zordan, V. B., 2021, In: Proceedings of the ACM on Computer Graphics and Interactive Techniques. 4, 3, p. 1-16 3479985.Research output: Contribution to journal › Journal article › Research › peer-review
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Brain Segmentation in Rodent MR-Images Using Convolutional Neural Networks
Sigurdsson, B., Darkner, Sune, Sommer, Stefan Horst, Mortensen, K. N., Sanggaard, S., Kostrikov, S. & Nedergaard, Maiken, 2018.Research output: Contribution to conference › Conference abstract for conference › Research › peer-review
- Published
A framework for voxel-based assessment of biological effect after proton radiotherapy in pediatric brain cancer patients using multi-modal imaging
Skaarup, M., Lundemann, M. J., Darkner, Sune, Jorgensen, M., Marner, Lisbeth, Mirkovic, D., Grosshans, D., Peeler, C., Mohan, R., Vogelius, Ivan R. & Appelt, A., 10 Jun 2021, In: Medical Physics. 48, 7, 12 p., 4110-4121.Research output: Contribution to journal › Journal article › Research › peer-review
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RootPainter3D: Interactive-machine-learning enables rapid and accurate contouring for radiotherapy
Smith, Abraham George, Petersen, Jens, Terrones-Campos, C., Berthelsen, A. K., Forbes, N. J., Darkner, Sune, Specht, Lena & Vogelius, I. R., 2022, In: Medical Physics. 49, 1, p. 461-473Research output: Contribution to journal › Journal article › Research › peer-review
ID: 18038443
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Locally orderless registration
Research output: Contribution to journal › Journal article › Research › peer-review
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Jet-based local image descriptors
Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
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3019
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FDG-PET template MNI152 1mm
Research output: Non-textual form › Dataset › Research
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